RNA–Protein interactions for RNA: ENST00000291281.8

PRKD2-201, Transcript of protein kinase D2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD2, Length 3,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-201ENST00000291281 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
PRKD2-201ENST00000291281 CHMP5Q9NZZ3 219 aa19.42■□□□□ 0.7
PRKD2-201ENST00000291281 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
PRKD2-201ENST00000291281 TNNQ9UQP3 1299 aa19.42■□□□□ 0.7
PRKD2-201ENST00000291281 ZC3H13Q5T200 1668 aaKnown RBP19.41■□□□□ 0.7
PRKD2-201ENST00000291281 DIP2CQ9Y2E4 1556 aa19.41■□□□□ 0.7
PRKD2-201ENST00000291281 XRCC6P12956 609 aaKnown RBP eCLIP19.41■□□□□ 0.7
PRKD2-201ENST00000291281 CABP2Q9NPB3 220 aa19.4■□□□□ 0.7
PRKD2-201ENST00000291281 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
PRKD2-201ENST00000291281 C22orf23Q9BZE7 217 aa19.4■□□□□ 0.7
PRKD2-201ENST00000291281 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
PRKD2-201ENST00000291281 ZKSCAN2Q63HK3 967 aa19.39■□□□□ 0.69
PRKD2-201ENST00000291281 ADGRB2O60241 1585 aa19.39■□□□□ 0.69
PRKD2-201ENST00000291281 RRP9O43818 475 aaKnown RBP19.39■□□□□ 0.69
PRKD2-201ENST00000291281 BCL2L13Q9BXK5 485 aa19.39■□□□□ 0.69
PRKD2-201ENST00000291281 MROH2AA6NES4 1674 aa19.38■□□□□ 0.69
PRKD2-201ENST00000291281 NAP1L2Q9ULW6 460 aaPredicted RBP19.38■□□□□ 0.69
PRKD2-201ENST00000291281 MINK1Q8N4C8 1332 aaPredicted RBP19.38■□□□□ 0.69
PRKD2-201ENST00000291281 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
PRKD2-201ENST00000291281 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
PRKD2-201ENST00000291281 QRICH2Q9H0J4 1663 aa19.37■□□□□ 0.69
PRKD2-201ENST00000291281 SRPK2P78362 688 aaKnown RBP19.37■□□□□ 0.69
PRKD2-201ENST00000291281 DHX37Q8IY37 1157 aaKnown RBP19.37■□□□□ 0.69
PRKD2-201ENST00000291281 FTSJ3Q8IY81 847 aaKnown RBP19.36■□□□□ 0.69
PRKD2-201ENST00000291281 ISY1Q9ULR0 285 aaKnown RBP19.36■□□□□ 0.69
PRKD2-201ENST00000291281 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
PRKD2-201ENST00000291281 NSD2O96028 1365 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 ADGRB3O60242 1522 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 DIP2BQ9P265 1576 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 MTHFSP49914 203 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 TRAK2O60296 914 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 CLCN1P35523 988 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 MRE11P49959 708 aa19.35■□□□□ 0.69
PRKD2-201ENST00000291281 LMTK2Q8IWU2 1503 aa19.34■□□□□ 0.69
PRKD2-201ENST00000291281 DDX11L8A8MPP1 907 aa19.34■□□□□ 0.69
PRKD2-201ENST00000291281 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
PRKD2-201ENST00000291281 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
PRKD2-201ENST00000291281 MFAP1P55081 439 aaKnown RBP19.33■□□□□ 0.69
PRKD2-201ENST00000291281 PRAM1Q96QH2 718 aa19.33■□□□□ 0.69
PRKD2-201ENST00000291281 CHMP4BQ9H444 224 aaKnown RBP19.33■□□□□ 0.69
PRKD2-201ENST00000291281 HSCBQ8IWL3 235 aa19.33■□□□□ 0.68
PRKD2-201ENST00000291281 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
PRKD2-201ENST00000291281 ADGRB1O14514 1584 aa19.31■□□□□ 0.68
PRKD2-201ENST00000291281 SPRYD3Q8NCJ5 442 aa19.31■□□□□ 0.68
PRKD2-201ENST00000291281 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
PRKD2-201ENST00000291281 BBXQ8WY36 941 aaPredicted RBP19.31■□□□□ 0.68
PRKD2-201ENST00000291281 NAP1L5Q96NT1 182 aaPredicted RBP19.31■□□□□ 0.68
PRKD2-201ENST00000291281 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
PRKD2-201ENST00000291281 RICTORQ6R327 1708 aa19.3■□□□□ 0.68
PRKD2-201ENST00000291281 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
PRKD2-201ENST00000291281 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
PRKD2-201ENST00000291281 WAPLQ7Z5K2 1190 aa19.3■□□□□ 0.68
PRKD2-201ENST00000291281 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
PRKD2-201ENST00000291281 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
PRKD2-201ENST00000291281 PPLO60437 1756 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 DDIT3P35638 169 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 SNX21Q969T3 373 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 SMC4Q9NTJ3 1288 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 TRIM27P14373 513 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 GLI2P10070 1586 aa19.28■□□□□ 0.68
PRKD2-201ENST00000291281 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
PRKD2-201ENST00000291281 RBM25P49756 843 aaKnown RBP19.28■□□□□ 0.68
PRKD2-201ENST00000291281 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
PRKD2-201ENST00000291281 HSP90AA1P07900 732 aaKnown RBP19.26■□□□□ 0.67
PRKD2-201ENST00000291281 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
PRKD2-201ENST00000291281 CIZ1Q9ULV3 898 aaPredicted RBP19.26■□□□□ 0.67
PRKD2-201ENST00000291281 GRPEL1Q9HAV7 217 aa19.26■□□□□ 0.67
PRKD2-201ENST00000291281 CAMSAP1Q5T5Y3 1602 aa19.26■□□□□ 0.67
PRKD2-201ENST00000291281 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
PRKD2-201ENST00000291281 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
PRKD2-201ENST00000291281 IL16Q14005 1332 aa19.25■□□□□ 0.67
PRKD2-201ENST00000291281 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
PRKD2-201ENST00000291281 SIGLEC1Q9BZZ2 1709 aa19.25■□□□□ 0.67
PRKD2-201ENST00000291281 EXOSC9Q06265 439 aaKnown RBP19.24■□□□□ 0.67
PRKD2-201ENST00000291281 CHMP4AQ9BY43 222 aa19.24■□□□□ 0.67
PRKD2-201ENST00000291281 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
PRKD2-201ENST00000291281 TSR2Q969E8 191 aaKnown RBP19.23■□□□□ 0.67
PRKD2-201ENST00000291281 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
PRKD2-201ENST00000291281 PTMSP20962 102 aa19.23■□□□□ 0.67
PRKD2-201ENST00000291281 TXNDC2Q86VQ3 553 aa19.22■□□□□ 0.67
PRKD2-201ENST00000291281 ZBTB40Q9NUA8 1239 aa19.22■□□□□ 0.67
PRKD2-201ENST00000291281 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
PRKD2-201ENST00000291281 PLEKHF1Q96S99 279 aa19.22■□□□□ 0.67
PRKD2-201ENST00000291281 NUCB1Q02818 461 aa19.21■□□□□ 0.67
PRKD2-201ENST00000291281 PRDM4Q9UKN5 801 aa19.21■□□□□ 0.67
PRKD2-201ENST00000291281 ARHGAP31Q2M1Z3 1444 aa19.21■□□□□ 0.67
PRKD2-201ENST00000291281 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
PRKD2-201ENST00000291281 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
PRKD2-201ENST00000291281 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
PRKD2-201ENST00000291281 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
PRKD2-201ENST00000291281 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
PRKD2-201ENST00000291281 SKOR2Q2VWA4 1001 aaPredicted RBP19.2■□□□□ 0.66
PRKD2-201ENST00000291281 COL3A1P02461 1466 aaPredicted RBP19.2■□□□□ 0.66
PRKD2-201ENST00000291281 BRD2P25440 801 aaKnown RBP19.19■□□□□ 0.66
PRKD2-201ENST00000291281 NOB1Q9ULX3 412 aaKnown RBP19.19■□□□□ 0.66
PRKD2-201ENST00000291281 TRIM35Q9UPQ4 493 aa19.19■□□□□ 0.66
PRKD2-201ENST00000291281 TMEM57Q8N5G2 664 aa19.19■□□□□ 0.66
PRKD2-201ENST00000291281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
PRKD2-201ENST00000291281 ARHGEF28Q8N1W1 1705 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms