RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CCDC61Q9Y6R9 512 aa25.1■■□□□ 1.61
BRAF-201ENST00000288602 C3P01024 1663 aa25.1■■□□□ 1.61
BRAF-201ENST00000288602 MSH5O43196 834 aa25.09■■□□□ 1.61
BRAF-201ENST00000288602 WDR63Q8IWG1 891 aa25.09■■□□□ 1.61
BRAF-201ENST00000288602 POLKQ9UBT6 870 aa25.09■■□□□ 1.61
BRAF-201ENST00000288602 PRR36Q9H6K5 1346 aa25.09■■□□□ 1.61
BRAF-201ENST00000288602 CPSF1Q10570 1443 aaKnown RBP25.09■■□□□ 1.61
BRAF-201ENST00000288602 KNDC1Q76NI1 1749 aa25.09■■□□□ 1.61
BRAF-201ENST00000288602 CPS1P31327 1500 aa25.08■■□□□ 1.61
BRAF-201ENST00000288602 SIRT1Q96EB6 747 aa25.08■■□□□ 1.61
BRAF-201ENST00000288602 ANP32EQ9BTT0 268 aa25.08■■□□□ 1.61
BRAF-201ENST00000288602 CCDC27Q2M243 656 aa25.08■■□□□ 1.61
BRAF-201ENST00000288602 PLEKHG1Q9ULL1 1385 aa25.07■■□□□ 1.6
BRAF-201ENST00000288602 FANCIQ9NVI1 1328 aa25.07■■□□□ 1.6
BRAF-201ENST00000288602 EID1Q9Y6B2 187 aa25.07■■□□□ 1.6
BRAF-201ENST00000288602 EMILIN1Q9Y6C2 1016 aa25.06■■□□□ 1.6
BRAF-201ENST00000288602 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
BRAF-201ENST00000288602 PNPLA6Q8IY17 1366 aa25.05■■□□□ 1.6
BRAF-201ENST00000288602 MAPK8IP3Q9UPT6 1336 aa25.05■■□□□ 1.6
BRAF-201ENST00000288602 ADGRB2O60241 1585 aa25.05■■□□□ 1.6
BRAF-201ENST00000288602 EDC4Q6P2E9 1401 aaKnown RBP25.05■■□□□ 1.6
BRAF-201ENST00000288602 FRAT1Q92837 279 aaPredicted RBP25.05■■□□□ 1.6
BRAF-201ENST00000288602 BCL2L13Q9BXK5 485 aa25.05■■□□□ 1.6
BRAF-201ENST00000288602 FER1L4A9Z1Z3 1794 aa25.04■■□□□ 1.6
BRAF-201ENST00000288602 PTPRUQ92729 1446 aa25.04■■□□□ 1.6
BRAF-201ENST00000288602 MAP2P11137 1827 aaKnown RBP25.03■■□□□ 1.6
BRAF-201ENST00000288602 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.03■■□□□ 1.6
BRAF-201ENST00000288602 CANXP27824 592 aaKnown RBP25.03■■□□□ 1.6
BRAF-201ENST00000288602 TSR2Q969E8 191 aaKnown RBP25.03■■□□□ 1.6
BRAF-201ENST00000288602 TRIM35Q9UPQ4 493 aa25.03■■□□□ 1.6
BRAF-201ENST00000288602 RARSP54136 660 aaKnown RBP25.02■■□□□ 1.6
BRAF-201ENST00000288602 PANK1Q8TE04 598 aa25.01■■□□□ 1.59
BRAF-201ENST00000288602 CDC42BPGQ6DT37 1551 aa25.01■■□□□ 1.59
BRAF-201ENST00000288602 RRS1Q15050 365 aaKnown RBP25.01■■□□□ 1.59
BRAF-201ENST00000288602 AMOTL2Q9Y2J4 779 aa25.01■■□□□ 1.59
BRAF-201ENST00000288602 HMOX1P09601 288 aa25■■□□□ 1.59
BRAF-201ENST00000288602 RIPK4P57078 832 aa25■■□□□ 1.59
BRAF-201ENST00000288602 COG3Q96JB2 828 aa24.99■■□□□ 1.59
BRAF-201ENST00000288602 MYH16Q9H6N6 1097 aa24.99■■□□□ 1.59
BRAF-201ENST00000288602 KDM2BQ8NHM5 1336 aa24.98■■□□□ 1.59
BRAF-201ENST00000288602 TNNQ9UQP3 1299 aa24.98■■□□□ 1.59
BRAF-201ENST00000288602 COG6Q9Y2V7 657 aa24.98■■□□□ 1.59
BRAF-201ENST00000288602 TCERG1O14776 1098 aaKnown RBP24.97■■□□□ 1.59
BRAF-201ENST00000288602 PRKAR2BP31323 418 aa24.97■■□□□ 1.59
BRAF-201ENST00000288602 THEMISQ8N1K5 641 aaPredicted RBP24.96■■□□□ 1.59
BRAF-201ENST00000288602 ACEP12821 1306 aa24.95■■□□□ 1.59
BRAF-201ENST00000288602 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.59
BRAF-201ENST00000288602 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.58
BRAF-201ENST00000288602 FCHSD2O94868 740 aa24.94■■□□□ 1.58
BRAF-201ENST00000288602 NCBP3Q53F19 620 aaKnown RBP24.94■■□□□ 1.58
BRAF-201ENST00000288602 ZNF692Q9BU19 519 aaPredicted RBP24.94■■□□□ 1.58
BRAF-201ENST00000288602 SLIT1O75093 1534 aa24.94■■□□□ 1.58
BRAF-201ENST00000288602 LRRC7Q96NW7 1537 aa24.94■■□□□ 1.58
BRAF-201ENST00000288602 ARHGAP23Q9P227 1491 aa24.94■■□□□ 1.58
BRAF-201ENST00000288602 ITSN1Q15811 1721 aa24.94■■□□□ 1.58
BRAF-201ENST00000288602 PDE3AQ14432 1141 aa24.93■■□□□ 1.58
BRAF-201ENST00000288602 PHACTR3Q96KR7 559 aa24.93■■□□□ 1.58
BRAF-201ENST00000288602 AKAP12Q02952 1782 aa24.93■■□□□ 1.58
BRAF-201ENST00000288602 EXOSC9Q06265 439 aaKnown RBP24.93■■□□□ 1.58
BRAF-201ENST00000288602 CENPQQ7L2Z9 268 aaPredicted RBP24.92■■□□□ 1.58
BRAF-201ENST00000288602 IL13P35225 146 aa24.92■■□□□ 1.58
BRAF-201ENST00000288602 CLUAP1Q96AJ1 413 aa24.92■■□□□ 1.58
BRAF-201ENST00000288602 PMFBP1Q8TBY8 1022 aa24.91■■□□□ 1.58
BRAF-201ENST00000288602 TBX22Q9Y458 520 aa24.91■■□□□ 1.58
BRAF-201ENST00000288602 RLBP1P12271 317 aa24.91■■□□□ 1.58
BRAF-201ENST00000288602 PNNQ9H307 717 aaKnown RBP24.91■■□□□ 1.58
BRAF-201ENST00000288602 PDE4AP27815 886 aa24.9■■□□□ 1.58
BRAF-201ENST00000288602 TTC21BQ7Z4L5 1316 aa24.89■■□□□ 1.58
BRAF-201ENST00000288602 SOX12O15370 315 aa24.89■■□□□ 1.57
BRAF-201ENST00000288602 AATKQ6ZMQ8 1374 aa24.88■■□□□ 1.57
BRAF-201ENST00000288602 IGHDP01880 384 aa24.87■■□□□ 1.57
BRAF-201ENST00000288602 PLEKHG3A1L390 1219 aa24.87■■□□□ 1.57
BRAF-201ENST00000288602 NEFMP07197 916 aa24.86■■□□□ 1.57
BRAF-201ENST00000288602 THUMPD2Q9BTF0 503 aaKnown RBP24.86■■□□□ 1.57
BRAF-201ENST00000288602 LAS1LQ9Y4W2 734 aaKnown RBP24.86■■□□□ 1.57
BRAF-201ENST00000288602 CDK12Q9NYV4 1490 aaPredicted RBP24.85■■□□□ 1.57
BRAF-201ENST00000288602 MS4A1P11836 297 aa24.85■■□□□ 1.57
BRAF-201ENST00000288602 BACH2Q9BYV9 841 aa24.85■■□□□ 1.57
BRAF-201ENST00000288602 TOPAZ1Q8N9V7 1692 aa24.84■■□□□ 1.57
BRAF-201ENST00000288602 NPM2Q86SE8 214 aaKnown RBP24.84■■□□□ 1.57
BRAF-201ENST00000288602 KCNA6P17658 529 aa24.83■■□□□ 1.57
BRAF-201ENST00000288602 USP6P35125 1406 aa24.83■■□□□ 1.57
BRAF-201ENST00000288602 SMC4Q9NTJ3 1288 aa24.83■■□□□ 1.56
BRAF-201ENST00000288602 RGS3P49796 1198 aa24.82■■□□□ 1.56
BRAF-201ENST00000288602 IL16Q14005 1332 aa24.82■■□□□ 1.56
BRAF-201ENST00000288602 NFE2L2Q16236 605 aa24.81■■□□□ 1.56
BRAF-201ENST00000288602 SSH1Q8WYL5 1049 aa24.81■■□□□ 1.56
BRAF-201ENST00000288602 RGPD8O14715 1765 aaPredicted RBP24.81■■□□□ 1.56
BRAF-201ENST00000288602 NRKQ7Z2Y5 1582 aa24.8■■□□□ 1.56
BRAF-201ENST00000288602 RIMS1Q86UR5 1692 aaKnown RBP24.8■■□□□ 1.56
BRAF-201ENST00000288602 PTCH1Q13635 1447 aa24.8■■□□□ 1.56
BRAF-201ENST00000288602 NGDNQ8NEJ9 315 aaKnown RBP24.79■■□□□ 1.56
BRAF-201ENST00000288602 ANP32AP39687 249 aaKnown RBP24.79■■□□□ 1.56
BRAF-201ENST00000288602 RBM33Q96EV2 1170 aaKnown RBP24.79■■□□□ 1.56
BRAF-201ENST00000288602 CEP170BQ9Y4F5 1589 aaPredicted RBP24.78■■□□□ 1.56
BRAF-201ENST00000288602 AEBP1Q8IUX7 1158 aa24.78■■□□□ 1.56
BRAF-201ENST00000288602 EIF4A2Q14240 407 aaKnown RBP24.77■■□□□ 1.56
BRAF-201ENST00000288602 ZKSCAN2Q63HK3 967 aa24.77■■□□□ 1.56
BRAF-201ENST00000288602 DIP2AQ14689 1571 aa24.77■■□□□ 1.56
BRAF-201ENST00000288602 OVOS2A0A0J9YW53 1432 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms