RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 CD163L1Q9NR16 1453 aa13.06□□□□□ -0.32
PPP4R1-201ENST00000285124 PIK3R4Q99570 1358 aa13.05□□□□□ -0.32
PPP4R1-201ENST00000285124 HMOX1P09601 288 aa13.05□□□□□ -0.32
PPP4R1-201ENST00000285124 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
PPP4R1-201ENST00000285124 POLKQ9UBT6 870 aa13.05□□□□□ -0.32
PPP4R1-201ENST00000285124 MYOM1P52179 1685 aa13.04□□□□□ -0.32
PPP4R1-201ENST00000285124 ATP7BP35670 1465 aa13.04□□□□□ -0.32
PPP4R1-201ENST00000285124 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
PPP4R1-201ENST00000285124 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
PPP4R1-201ENST00000285124 NINLQ9Y2I6 1382 aa13.03□□□□□ -0.32
PPP4R1-201ENST00000285124 CPS1P31327 1500 aa13.02□□□□□ -0.32
PPP4R1-201ENST00000285124 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-201ENST00000285124 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
PPP4R1-201ENST00000285124 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
PPP4R1-201ENST00000285124 AMPHP49418 695 aa13.01□□□□□ -0.33
PPP4R1-201ENST00000285124 DIAPH1O60610 1272 aaKnown RBP13.01□□□□□ -0.33
PPP4R1-201ENST00000285124 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
PPP4R1-201ENST00000285124 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
PPP4R1-201ENST00000285124 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
PPP4R1-201ENST00000285124 NUDCQ9Y266 331 aa13□□□□□ -0.33
PPP4R1-201ENST00000285124 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
PPP4R1-201ENST00000285124 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-201ENST00000285124 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
PPP4R1-201ENST00000285124 EDC4Q6P2E9 1401 aaKnown RBP12.99□□□□□ -0.33
PPP4R1-201ENST00000285124 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
PPP4R1-201ENST00000285124 ZNF142P52746 1687 aaPredicted RBP12.98□□□□□ -0.33
PPP4R1-201ENST00000285124 USP6P35125 1406 aa12.98□□□□□ -0.33
PPP4R1-201ENST00000285124 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
PPP4R1-201ENST00000285124 MSH6P52701 1360 aa12.98□□□□□ -0.33
PPP4R1-201ENST00000285124 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
PPP4R1-201ENST00000285124 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
PPP4R1-201ENST00000285124 TCP11L2Q8N4U5 519 aa12.97□□□□□ -0.33
PPP4R1-201ENST00000285124 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
PPP4R1-201ENST00000285124 ZBED9Q6R2W3 1325 aa12.97□□□□□ -0.33
PPP4R1-201ENST00000285124 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-201ENST00000285124 FKBP8Q14318 412 aa12.95□□□□□ -0.34
PPP4R1-201ENST00000285124 MAP3K19Q56UN5 1328 aa12.95□□□□□ -0.34
PPP4R1-201ENST00000285124 NSD2O96028 1365 aa12.95□□□□□ -0.34
PPP4R1-201ENST00000285124 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
PPP4R1-201ENST00000285124 USHBP1Q8N6Y0 703 aa12.95□□□□□ -0.34
PPP4R1-201ENST00000285124 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
PPP4R1-201ENST00000285124 SULT6B1Q6IMI4 303 aa12.94□□□□□ -0.34
PPP4R1-201ENST00000285124 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-201ENST00000285124 MAPK8IP3Q9UPT6 1336 aa12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 BRINP3Q76B58 766 aa12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-201ENST00000285124 NEFMP07197 916 aa12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 RUNDC1Q96C34 613 aa12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 GCP02774 474 aa12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 PHACTR3Q96KR7 559 aa12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-201ENST00000285124 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
PPP4R1-201ENST00000285124 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
PPP4R1-201ENST00000285124 NEFLP07196 543 aa12.91□□□□□ -0.34
PPP4R1-201ENST00000285124 IL13P35225 146 aa12.9□□□□□ -0.34
PPP4R1-201ENST00000285124 RIPK4P57078 832 aa12.9□□□□□ -0.34
PPP4R1-201ENST00000285124 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
PPP4R1-201ENST00000285124 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
PPP4R1-201ENST00000285124 LRRC59Q96AG4 307 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-201ENST00000285124 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
PPP4R1-201ENST00000285124 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
PPP4R1-201ENST00000285124 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
PPP4R1-201ENST00000285124 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
PPP4R1-201ENST00000285124 PLIN1O60240 522 aa12.87□□□□□ -0.35
PPP4R1-201ENST00000285124 WWC1Q8IX03 1113 aa12.87□□□□□ -0.35
PPP4R1-201ENST00000285124 STRCQ7RTU9 1775 aa12.87□□□□□ -0.35
PPP4R1-201ENST00000285124 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
PPP4R1-201ENST00000285124 HOXC9P31274 260 aa12.87□□□□□ -0.35
PPP4R1-201ENST00000285124 CSB-PGBD3P0DP91 1061 aa12.86□□□□□ -0.35
PPP4R1-201ENST00000285124 EYA1Q99502 592 aa12.86□□□□□ -0.35
PPP4R1-201ENST00000285124 MST1RQ04912 1400 aa12.86□□□□□ -0.35
PPP4R1-201ENST00000285124 LRRC7Q96NW7 1537 aa12.86□□□□□ -0.35
PPP4R1-201ENST00000285124 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-201ENST00000285124 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
PPP4R1-201ENST00000285124 TSR2Q969E8 191 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 STRCP1A6NGW2 1772 aa12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
PPP4R1-201ENST00000285124 UBAP1LF5GYI3 381 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 FCHSD2O94868 740 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 NUTM2BA6NNL0 878 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 NUTM2EB1AL46 878 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 NUTM2AQ8IVF1 878 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
PPP4R1-201ENST00000285124 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms