RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SCAMP3O14828 347 aaKnown RBP3.71□□□□□ -1.82
CHD1-201ENST00000284049 ZCRB1Q8TBF4 217 aaKnown RBP3.71□□□□□ -1.82
CHD1-201ENST00000284049 BACH2Q9BYV9 841 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 EN1Q05925 392 aaPredicted RBP3.71□□□□□ -1.82
CHD1-201ENST00000284049 AGERQ15109 404 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 SLF2Q8IX21 1173 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 PRR7Q8TB68 274 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 USP17L3A6NCW0 530 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 USP17L4A6NCW7 530 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 CCDC85CA6NKD9 419 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 U2SURPO15042 1029 aaKnown RBP3.7□□□□□ -1.82
CHD1-201ENST00000284049 RTL5Q5HYW3 569 aaPredicted RBP3.7□□□□□ -1.82
CHD1-201ENST00000284049 USP17L2Q6R6M4 530 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 USP17L1Q7RTZ2 530 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 MKNK1Q9BUB5 465 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 BIVM-ERCC5R4GMW8 1640 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 TIE1P35590 1138 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 ZNF76P36508 570 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 C6orf132Q5T0Z8 1188 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 LRRN4Q8WUT4 740 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 FKBP4Q02790 459 aaKnown RBP eCLIP3.7□□□□□ -1.82
CHD1-201ENST00000284049 ARID5AQ03989 594 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 BMS1Q14692 1282 aaKnown RBP3.7□□□□□ -1.82
CHD1-201ENST00000284049 OGFOD1Q8N543 542 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 ALG2Q9H553 416 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.7□□□□□ -1.82
CHD1-201ENST00000284049 STK10O94804 968 aaKnown RBP3.7□□□□□ -1.82
CHD1-201ENST00000284049 NDUFV2P19404 249 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 MTMR2Q13614 643 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 MS4A3Q96HJ5 214 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 CEP89Q96ST8 783 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 ZBBXA8MT70 800 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 ADAMTS19Q8TE59 1207 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 RNF34Q969K3 372 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 C8orf37Q96NL8 207 aa3.7□□□□□ -1.82
CHD1-201ENST00000284049 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.7□□□□□ -1.82
CHD1-201ENST00000284049 ABCC8Q09428 1581 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 BRPF3Q9ULD4 1205 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 IQSEC3Q9UPP2 1182 aaPredicted RBP3.69□□□□□ -1.82
CHD1-201ENST00000284049 PCDHB9Q9Y5E1 797 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 NBPF26B4DH59 902 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 CDCA7Q9BWT1 371 aaPredicted RBP3.69□□□□□ -1.82
CHD1-201ENST00000284049 PTGER2P43116 358 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 ANKMY2Q8IV38 441 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 MICAL1Q8TDZ2 1067 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 CHMP7Q8WUX9 453 aaPredicted RBP3.69□□□□□ -1.82
CHD1-201ENST00000284049 ADGRG1Q9Y653 693 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 SOWAHDA6NJG2 315 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 MARCH6O60337 910 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 SOGA3Q5TF21 947 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 CTDSPL2Q05D32 466 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 UBE2Q2Q8WVN8 375 aa3.69□□□□□ -1.82
CHD1-201ENST00000284049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.69□□□□□ -1.822e-6■■■■■ 66.2
CHD1-201ENST00000284049 WDR62O43379 1518 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 NR1H3Q13133 447 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 CDCA7LQ96GN5 454 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 LZTS3O60299 673 aaPredicted RBP3.68□□□□□ -1.82
CHD1-201ENST00000284049 LILRB3O75022 631 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 PHF14O94880 888 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 SEC13P55735 322 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 PRIMPOLQ96LW4 560 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 TRIM34Q9BYJ4 488 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 OCEL1Q9H607 264 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 CYLDQ9NQC7 956 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 DCTN4Q9UJW0 460 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 INPP5FQ9Y2H2 1132 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 DPYDQ12882 1025 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 NCOA4Q13772 614 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 NOP9Q86U38 636 aaKnown RBP3.68□□□□□ -1.82
CHD1-201ENST00000284049 BRD3Q15059 726 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 PACS2Q86VP3 889 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 PHOX2BQ99453 314 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 HMX1Q9NP08 348 aaPredicted RBP3.68□□□□□ -1.82
CHD1-201ENST00000284049 PNMA3Q9UL41 463 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 PCDHGA10Q9Y5H3 936 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 PRMT3O60678 531 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 GJA5P36382 358 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 OXLD1Q5BKU9 147 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 CT47A1Q5JQC4 288 aaPredicted RBP3.68□□□□□ -1.82
CHD1-201ENST00000284049 PRPF38BQ5VTL8 546 aaKnown RBP3.68□□□□□ -1.82
CHD1-201ENST00000284049 GIMAP6Q6P9H5 292 aa3.68□□□□□ -1.82
CHD1-201ENST00000284049 THOC2Q8NI27 1593 aaKnown RBP3.68□□□□□ -1.82
CHD1-201ENST00000284049 SSBP05455 408 aaKnown RBP eCLIP3.67□□□□□ -1.82
CHD1-201ENST00000284049 CHMP4BP1P59074 171 aa3.67□□□□□ -1.82
CHD1-201ENST00000284049 DHX38Q92620 1227 aaKnown RBP3.67□□□□□ -1.82
CHD1-201ENST00000284049 ZDHHC16Q969W1 377 aa3.67□□□□□ -1.82
CHD1-201ENST00000284049 A0A0U1RQG5 324 aaPredicted RBP3.67□□□□□ -1.82
CHD1-201ENST00000284049 SMAPO00193 183 aa3.67□□□□□ -1.82
CHD1-201ENST00000284049 PEX14O75381 377 aa3.67□□□□□ -1.82
CHD1-201ENST00000284049 OS9Q13438 667 aaPredicted RBP3.67□□□□□ -1.82
CHD1-201ENST00000284049 PPARGC1BQ86YN6 1023 aaKnown RBP3.67□□□□□ -1.82
CHD1-201ENST00000284049 UCN2Q96RP3 112 aa3.67□□□□□ -1.82
CHD1-201ENST00000284049 BCCIPQ9P287 314 aaKnown RBP eCLIP3.67□□□□□ -1.82
CHD1-201ENST00000284049 SF3B2Q13435 895 aaKnown RBP3.67□□□□□ -1.82
CHD1-201ENST00000284049 LNPKQ9C0E8 428 aa3.67□□□□□ -1.82
CHD1-201ENST00000284049 FAM196BA6NMK8 535 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 TTLL13PA6NNM8 815 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 RAB11FIP3O75154 756 aa3.66□□□□□ -1.82
CHD1-201ENST00000284049 S100BP04271 92 aaPredicted RBP3.66□□□□□ -1.82
CHD1-201ENST00000284049 CD46P15529 392 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms