RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
LRTM1-201ENST00000273286 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
LRTM1-201ENST00000273286 SLC10A3P09131 477 aa15.77■□□□□ 0.12
LRTM1-201ENST00000273286 BLOC1S3Q6QNY0 202 aa15.77■□□□□ 0.11
LRTM1-201ENST00000273286 NKX2-3Q8TAU0 364 aa15.77■□□□□ 0.11
LRTM1-201ENST00000273286 ATP10AO60312 1499 aa15.76■□□□□ 0.11
LRTM1-201ENST00000273286 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
LRTM1-201ENST00000273286 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
LRTM1-201ENST00000273286 ACTN4O43707 911 aaKnown RBP15.75■□□□□ 0.11
LRTM1-201ENST00000273286 NLRP7Q8WX94 980 aa15.75■□□□□ 0.11
LRTM1-201ENST00000273286 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
LRTM1-201ENST00000273286 ZPR1O75312 459 aa15.74■□□□□ 0.11
LRTM1-201ENST00000273286 PPP1R18Q6NYC8 613 aa15.74■□□□□ 0.11
LRTM1-201ENST00000273286 FBXO41Q8TF61 875 aa15.73■□□□□ 0.11
LRTM1-201ENST00000273286 IRX2Q9BZI1 471 aaPredicted RBP15.73■□□□□ 0.11
LRTM1-201ENST00000273286 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
LRTM1-201ENST00000273286 KDM5CP41229 1560 aa15.72■□□□□ 0.11
LRTM1-201ENST00000273286 FER1L4A9Z1Z3 1794 aa15.71■□□□□ 0.11
LRTM1-201ENST00000273286 ARHGEF12Q9NZN5 1544 aa15.7■□□□□ 0.1
LRTM1-201ENST00000273286 RSPH4AQ5TD94 716 aa15.69■□□□□ 0.1
LRTM1-201ENST00000273286 PHOX2BQ99453 314 aa15.69■□□□□ 0.1
LRTM1-201ENST00000273286 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.69■□□□□ 0.1
LRTM1-201ENST00000273286 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
LRTM1-201ENST00000273286 SIGLEC1Q9BZZ2 1709 aa15.69■□□□□ 0.1
LRTM1-201ENST00000273286 REREQ9P2R6 1566 aa15.68■□□□□ 0.1
LRTM1-201ENST00000273286 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
LRTM1-201ENST00000273286 MLH3Q9UHC1 1453 aa15.68■□□□□ 0.1
LRTM1-201ENST00000273286 MLECQ14165 292 aa15.68■□□□□ 0.1
LRTM1-201ENST00000273286 RDH13Q8NBN7 331 aa15.68■□□□□ 0.1
LRTM1-201ENST00000273286 LRRIQ1Q96JM4 1722 aa15.67■□□□□ 0.1
LRTM1-201ENST00000273286 PREX2Q70Z35 1606 aa15.67■□□□□ 0.1
LRTM1-201ENST00000273286 TLL1O43897 1013 aa15.67■□□□□ 0.1
LRTM1-201ENST00000273286 DDX11L8A8MPP1 907 aa15.66■□□□□ 0.1
LRTM1-201ENST00000273286 CDC42BPBQ9Y5S2 1711 aa15.65■□□□□ 0.1
LRTM1-201ENST00000273286 GGCXP38435 758 aa15.65■□□□□ 0.1
LRTM1-201ENST00000273286 MAP2K5Q13163 448 aa15.65■□□□□ 0.1
LRTM1-201ENST00000273286 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
LRTM1-201ENST00000273286 ABCC1P33527 1531 aa15.64■□□□□ 0.09
LRTM1-201ENST00000273286 PRKD2Q9BZL6 878 aa15.63■□□□□ 0.09
LRTM1-201ENST00000273286 DIP2CQ9Y2E4 1556 aa15.63■□□□□ 0.09
LRTM1-201ENST00000273286 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
LRTM1-201ENST00000273286 HSPA2P54652 639 aa15.62■□□□□ 0.09
LRTM1-201ENST00000273286 AGLP35573 1532 aa15.62■□□□□ 0.09
LRTM1-201ENST00000273286 SETD1BQ9UPS6 1966 aaKnown RBP15.61■□□□□ 0.09
LRTM1-201ENST00000273286 NR1I2O75469 434 aa15.6■□□□□ 0.09
LRTM1-201ENST00000273286 ITSN2Q9NZM3 1697 aa15.6■□□□□ 0.09
LRTM1-201ENST00000273286 PUS10Q3MIT2 529 aaKnown RBP15.6■□□□□ 0.09
LRTM1-201ENST00000273286 SULF1Q8IWU6 871 aa15.6■□□□□ 0.09
LRTM1-201ENST00000273286 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
LRTM1-201ENST00000273286 ABCA6Q8N139 1617 aa15.59■□□□□ 0.09
LRTM1-201ENST00000273286 UHRF1BP1Q6BDS2 1440 aa15.59■□□□□ 0.09
LRTM1-201ENST00000273286 TRAPPC8Q9Y2L5 1435 aa15.59■□□□□ 0.09
LRTM1-201ENST00000273286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.59■□□□□ 0.09
LRTM1-201ENST00000273286 CDC42BPAQ5VT25 1732 aa15.58■□□□□ 0.08
LRTM1-201ENST00000273286 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
LRTM1-201ENST00000273286 PLEKHH2Q8IVE3 1493 aa15.57■□□□□ 0.08
LRTM1-201ENST00000273286 IRF6O14896 467 aa15.57■□□□□ 0.08
LRTM1-201ENST00000273286 TMUB1Q9BVT8 246 aa15.57■□□□□ 0.08
LRTM1-201ENST00000273286 MINK1Q8N4C8 1332 aaPredicted RBP15.56■□□□□ 0.08
LRTM1-201ENST00000273286 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
LRTM1-201ENST00000273286 V9GY48 417 aaPredicted RBP15.55■□□□□ 0.08
LRTM1-201ENST00000273286 KIDINS220Q9ULH0 1771 aa15.55■□□□□ 0.08
LRTM1-201ENST00000273286 ADH1BP00325 375 aa15.54■□□□□ 0.08
LRTM1-201ENST00000273286 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
LRTM1-201ENST00000273286 SCUBE3Q8IX30 993 aa15.54■□□□□ 0.08
LRTM1-201ENST00000273286 CCDC102AQ96A19 550 aa15.54■□□□□ 0.08
LRTM1-201ENST00000273286 KIAA1107Q9UPP5 1409 aa15.54■□□□□ 0.08
LRTM1-201ENST00000273286 GPATCH8Q9UKJ3 1502 aaKnown RBP15.54■□□□□ 0.08
LRTM1-201ENST00000273286 S1PR4O95977 384 aa15.53■□□□□ 0.08
LRTM1-201ENST00000273286 FUT2Q10981 343 aa15.53■□□□□ 0.08
LRTM1-201ENST00000273286 SAMD9LQ8IVG5 1584 aa15.53■□□□□ 0.08
LRTM1-201ENST00000273286 RNF223E7ERA6 249 aa15.52■□□□□ 0.08
LRTM1-201ENST00000273286 GCGRP47871 477 aa15.52■□□□□ 0.08
LRTM1-201ENST00000273286 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
LRTM1-201ENST00000273286 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
LRTM1-201ENST00000273286 CCNB3Q8WWL7 1395 aa15.51■□□□□ 0.07
LRTM1-201ENST00000273286 SYCP2Q9BX26 1530 aa15.51■□□□□ 0.07
LRTM1-201ENST00000273286 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
LRTM1-201ENST00000273286 C3P01024 1663 aa15.51■□□□□ 0.07
LRTM1-201ENST00000273286 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
LRTM1-201ENST00000273286 MDM2Q00987 491 aaPredicted RBP15.5■□□□□ 0.07
LRTM1-201ENST00000273286 MORN1Q5T089 497 aa15.49■□□□□ 0.07
LRTM1-201ENST00000273286 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
LRTM1-201ENST00000273286 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
LRTM1-201ENST00000273286 NPATQ14207 1427 aa15.48■□□□□ 0.07
LRTM1-201ENST00000273286 ATP6V1AP38606 617 aa15.48■□□□□ 0.07
LRTM1-201ENST00000273286 PPEF1O14829 653 aaPredicted RBP15.47■□□□□ 0.07
LRTM1-201ENST00000273286 SPSB2Q99619 263 aa15.47■□□□□ 0.07
LRTM1-201ENST00000273286 SLC6A16Q9GZN6 736 aa15.47■□□□□ 0.07
LRTM1-201ENST00000273286 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
LRTM1-201ENST00000273286 PTPRTO14522 1441 aa15.47■□□□□ 0.07
LRTM1-201ENST00000273286 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.07
LRTM1-201ENST00000273286 STRCQ7RTU9 1775 aa15.46■□□□□ 0.07
LRTM1-201ENST00000273286 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
LRTM1-201ENST00000273286 CD46P15529 392 aa15.45■□□□□ 0.06
LRTM1-201ENST00000273286 ANKLE1Q8NAG6 615 aa15.45■□□□□ 0.06
LRTM1-201ENST00000273286 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
LRTM1-201ENST00000273286 A2MP01023 1474 aa15.45■□□□□ 0.06
LRTM1-201ENST00000273286 GFRA3O60609 400 aa15.44■□□□□ 0.06
LRTM1-201ENST00000273286 Q6ZNB5 142 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms