RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 PRAM1Q96QH2 718 aa28.14■■■□□ 2.1
CDR2-201ENST00000268383 MLH3Q9UHC1 1453 aa28.14■■■□□ 2.1
CDR2-201ENST00000268383 AAMPQ13685 434 aa28.14■■■□□ 2.1
CDR2-201ENST00000268383 TMEM57Q8N5G2 664 aa28.13■■■□□ 2.09
CDR2-201ENST00000268383 ADGRB2O60241 1585 aa28.13■■■□□ 2.09
CDR2-201ENST00000268383 NSD2O96028 1365 aa28.12■■■□□ 2.09
CDR2-201ENST00000268383 ABCC11Q96J66 1382 aa28.12■■■□□ 2.09
CDR2-201ENST00000268383 ATF7IPQ6VMQ6 1270 aa28.11■■■□□ 2.09
CDR2-201ENST00000268383 PUS7Q96PZ0 661 aaKnown RBP28.07■■■□□ 2.08
CDR2-201ENST00000268383 MYO5BQ9ULV0 1848 aa28.07■■■□□ 2.08
CDR2-201ENST00000268383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.07■■■□□ 2.08
CDR2-201ENST00000268383 C22orf23Q9BZE7 217 aa28.07■■■□□ 2.08
CDR2-201ENST00000268383 COL3A1P02461 1466 aaPredicted RBP28.06■■■□□ 2.08
CDR2-201ENST00000268383 DDX19BQ9UMR2 479 aa28.06■■■□□ 2.08
CDR2-201ENST00000268383 CABP1Q9NZU7 370 aa28.05■■■□□ 2.08
CDR2-201ENST00000268383 DIAPH1O60610 1272 aaKnown RBP28.05■■■□□ 2.08
CDR2-201ENST00000268383 FBXO31Q5XUX0 539 aaPredicted RBP28.05■■■□□ 2.08
CDR2-201ENST00000268383 THUMPD2Q9BTF0 503 aaKnown RBP28.05■■■□□ 2.08
CDR2-201ENST00000268383 PIK3C2BO00750 1634 aa28.04■■■□□ 2.08
CDR2-201ENST00000268383 TERF2IPQ9NYB0 399 aa28.03■■■□□ 2.08
CDR2-201ENST00000268383 HDAC1Q13547 482 aaPredicted RBP28.02■■■□□ 2.08
CDR2-201ENST00000268383 LNPKQ9C0E8 428 aa28.02■■■□□ 2.08
CDR2-201ENST00000268383 CD163L1Q9NR16 1453 aa28.02■■■□□ 2.08
CDR2-201ENST00000268383 CDK19Q9BWU1 502 aa28.02■■■□□ 2.08
CDR2-201ENST00000268383 GZF1Q9H116 711 aaPredicted RBP28.01■■■□□ 2.07
CDR2-201ENST00000268383 HMOX1P09601 288 aa28.01■■■□□ 2.07
CDR2-201ENST00000268383 CT47B1P0C2W7 299 aaPredicted RBP28.01■■■□□ 2.07
CDR2-201ENST00000268383 ZBTB40Q9NUA8 1239 aa28.01■■■□□ 2.07
CDR2-201ENST00000268383 C1orf115Q9H7X2 142 aa27.99■■■□□ 2.07
CDR2-201ENST00000268383 PTPRMP28827 1452 aa27.99■■■□□ 2.07
CDR2-201ENST00000268383 ELL2O00472 640 aaPredicted RBP27.99■■■□□ 2.07
CDR2-201ENST00000268383 PRKAR2BP31323 418 aa27.99■■■□□ 2.07
CDR2-201ENST00000268383 NCBP3Q53F19 620 aaKnown RBP27.99■■■□□ 2.07
CDR2-201ENST00000268383 YEATS2Q9ULM3 1422 aa27.99■■■□□ 2.07
CDR2-201ENST00000268383 SMC5Q8IY18 1101 aa27.98■■■□□ 2.07
CDR2-201ENST00000268383 ZMYM3Q14202 1370 aa27.97■■■□□ 2.07
CDR2-201ENST00000268383 PHACTR3Q96KR7 559 aa27.97■■■□□ 2.07
CDR2-201ENST00000268383 WAPLQ7Z5K2 1190 aa27.96■■■□□ 2.07
CDR2-201ENST00000268383 HDGFL2Q7Z4V5 671 aaPredicted RBP27.95■■■□□ 2.07
CDR2-201ENST00000268383 ATAD2Q6PL18 1390 aa27.95■■■□□ 2.06
CDR2-201ENST00000268383 DIP2CQ9Y2E4 1556 aa27.95■■■□□ 2.06
CDR2-201ENST00000268383 YTHDC2Q9H6S0 1430 aaKnown RBP27.95■■■□□ 2.06
CDR2-201ENST00000268383 SLC52A1Q9NWF4 448 aa27.94■■■□□ 2.06
CDR2-201ENST00000268383 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
CDR2-201ENST00000268383 TSPYL6Q8N831 410 aa27.93■■■□□ 2.06
CDR2-201ENST00000268383 IL16Q14005 1332 aa27.92■■■□□ 2.06
CDR2-201ENST00000268383 POLKQ9UBT6 870 aa27.91■■■□□ 2.06
CDR2-201ENST00000268383 MCM4P33991 863 aa27.91■■■□□ 2.06
CDR2-201ENST00000268383 KIF16BQ96L93 1317 aa27.91■■■□□ 2.06
CDR2-201ENST00000268383 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
CDR2-201ENST00000268383 ZRANB1Q9UGI0 708 aa27.91■■■□□ 2.06
CDR2-201ENST00000268383 STAG3Q9UJ98 1225 aa27.91■■■□□ 2.06
CDR2-201ENST00000268383 IPO8O15397 1037 aaKnown RBP27.9■■■□□ 2.06
CDR2-201ENST00000268383 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
CDR2-201ENST00000268383 EMILIN1Q9Y6C2 1016 aa27.9■■■□□ 2.06
CDR2-201ENST00000268383 NUCB1Q02818 461 aa27.89■■■□□ 2.06
CDR2-201ENST00000268383 LRRC7Q96NW7 1537 aa27.89■■■□□ 2.05
CDR2-201ENST00000268383 PNPLA6Q8IY17 1366 aa27.88■■■□□ 2.05
CDR2-201ENST00000268383 FCHSD2O94868 740 aa27.87■■■□□ 2.05
CDR2-201ENST00000268383 ANKRD45Q5TZF3 282 aa27.87■■■□□ 2.05
CDR2-201ENST00000268383 CHD1LQ86WJ1 897 aa27.87■■■□□ 2.05
CDR2-201ENST00000268383 ZFYVE9O95405 1425 aa27.86■■■□□ 2.05
CDR2-201ENST00000268383 TMEM131LA2VDJ0 1609 aa27.86■■■□□ 2.05
CDR2-201ENST00000268383 PRKCSHP14314 528 aaPredicted RBP27.86■■■□□ 2.05
CDR2-201ENST00000268383 ARHGAP31Q2M1Z3 1444 aa27.86■■■□□ 2.05
CDR2-201ENST00000268383 HSCBQ8IWL3 235 aa27.85■■■□□ 2.05
CDR2-201ENST00000268383 CHMP5Q9NZZ3 219 aa27.85■■■□□ 2.05
CDR2-201ENST00000268383 ANKRD26Q9UPS8 1709 aa27.85■■■□□ 2.05
CDR2-201ENST00000268383 VAMP4O75379 141 aa27.83■■■□□ 2.05
CDR2-201ENST00000268383 PANK2Q9BZ23 570 aa27.83■■■□□ 2.05
CDR2-201ENST00000268383 FOXD4L1Q9NU39 408 aa27.83■■■□□ 2.05
CDR2-201ENST00000268383 NCKAP5LQ9HCH0 1330 aa27.83■■■□□ 2.05
CDR2-201ENST00000268383 ALDH1L2Q3SY69 923 aa27.83■■■□□ 2.05
CDR2-201ENST00000268383 ZBTB7BO15156 539 aaPredicted RBP27.82■■■□□ 2.04
CDR2-201ENST00000268383 FAM83GA6ND36 823 aa27.82■■■□□ 2.04
CDR2-201ENST00000268383 NME9Q86XW9 330 aa27.82■■■□□ 2.04
CDR2-201ENST00000268383 PREX1Q8TCU6 1659 aa27.82■■■□□ 2.04
CDR2-201ENST00000268383 ARHGEF40Q8TER5 1519 aa27.81■■■□□ 2.04
CDR2-201ENST00000268383 XRCC6P12956 609 aaKnown RBP eCLIP27.81■■■□□ 2.04
CDR2-201ENST00000268383 PPIP5K1Q6PFW1 1433 aa27.81■■■□□ 2.04
CDR2-201ENST00000268383 MRPL50Q8N5N7 158 aaKnown RBP27.81■■■□□ 2.04
CDR2-201ENST00000268383 ZNF692Q9BU19 519 aaPredicted RBP27.81■■■□□ 2.04
CDR2-201ENST00000268383 PNNQ9H307 717 aaKnown RBP27.81■■■□□ 2.04
CDR2-201ENST00000268383 FAM135BQ49AJ0 1406 aa27.8■■■□□ 2.04
CDR2-201ENST00000268383 MED14O60244 1454 aa27.8■■■□□ 2.04
CDR2-201ENST00000268383 ALKQ9UM73 1620 aa27.8■■■□□ 2.04
CDR2-201ENST00000268383 NEO1Q92859 1461 aa27.8■■■□□ 2.04
CDR2-201ENST00000268383 DCTN1Q14203 1278 aa27.8■■■□□ 2.04
CDR2-201ENST00000268383 NFE2L2Q16236 605 aa27.8■■■□□ 2.04
CDR2-201ENST00000268383 TRAK2O60296 914 aa27.79■■■□□ 2.04
CDR2-201ENST00000268383 SIRT2Q8IXJ6 389 aa27.79■■■□□ 2.04
CDR2-201ENST00000268383 FAM43AQ8N2R8 423 aa27.79■■■□□ 2.04
CDR2-201ENST00000268383 RRAGDQ9NQL2 400 aaPredicted RBP27.79■■■□□ 2.04
CDR2-201ENST00000268383 MBIPQ9NS73 344 aa27.79■■■□□ 2.04
CDR2-201ENST00000268383 MAP2P11137 1827 aaKnown RBP27.79■■■□□ 2.04
CDR2-201ENST00000268383 EIF5BO60841 1220 aaKnown RBP27.78■■■□□ 2.04
CDR2-201ENST00000268383 CD2BP2O95400 341 aaKnown RBP27.78■■■□□ 2.04
CDR2-201ENST00000268383 RRS1Q15050 365 aaKnown RBP27.78■■■□□ 2.04
CDR2-201ENST00000268383 KIF20BQ96Q89 1820 aa27.78■■■□□ 2.04
CDR2-201ENST00000268383 RBM42Q9BTD8 480 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms