RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 FAM43AQ8N2R8 423 aa28.81■■■□□ 2.2
THRA-201ENST00000264637 DDX19BQ9UMR2 479 aa28.81■■■□□ 2.2
THRA-201ENST00000264637 ABCC3O15438 1527 aa28.8■■■□□ 2.2
THRA-201ENST00000264637 ABCC11Q96J66 1382 aa28.8■■■□□ 2.2
THRA-201ENST00000264637 SIGLEC1Q9BZZ2 1709 aa28.79■■■□□ 2.2
THRA-201ENST00000264637 CAMSAP1Q5T5Y3 1602 aa28.79■■■□□ 2.2
THRA-201ENST00000264637 RIPK4P57078 832 aa28.79■■■□□ 2.2
THRA-201ENST00000264637 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
THRA-201ENST00000264637 POGZQ7Z3K3 1410 aa28.78■■■□□ 2.2
THRA-201ENST00000264637 GZF1Q9H116 711 aaPredicted RBP28.78■■■□□ 2.2
THRA-201ENST00000264637 FYB1O15117 783 aa28.77■■■□□ 2.2
THRA-201ENST00000264637 COL3A1P02461 1466 aaPredicted RBP28.77■■■□□ 2.2
THRA-201ENST00000264637 MCM4P33991 863 aa28.77■■■□□ 2.2
THRA-201ENST00000264637 NEXMIFQ5QGS0 1516 aa28.77■■■□□ 2.2
THRA-201ENST00000264637 SMC5Q8IY18 1101 aa28.76■■■□□ 2.19
THRA-201ENST00000264637 ZBTB40Q9NUA8 1239 aa28.75■■■□□ 2.19
THRA-201ENST00000264637 MINK1Q8N4C8 1332 aaPredicted RBP28.75■■■□□ 2.19
THRA-201ENST00000264637 IDI1Q13907 227 aa28.74■■■□□ 2.19
THRA-201ENST00000264637 MLH3Q9UHC1 1453 aa28.74■■■□□ 2.19
THRA-201ENST00000264637 L1TD1Q5T7N2 865 aaKnown RBP28.73■■■□□ 2.19
THRA-201ENST00000264637 RAPGEF3O95398 923 aa28.71■■■□□ 2.19
THRA-201ENST00000264637 CHMP5Q9NZZ3 219 aa28.71■■■□□ 2.19
THRA-201ENST00000264637 LNPKQ9C0E8 428 aa28.7■■■□□ 2.19
THRA-201ENST00000264637 RRAGDQ9NQL2 400 aaPredicted RBP28.7■■■□□ 2.19
THRA-201ENST00000264637 EIF5BO60841 1220 aaKnown RBP28.7■■■□□ 2.18
THRA-201ENST00000264637 RSPH6AQ9H0K4 717 aa28.7■■■□□ 2.18
THRA-201ENST00000264637 IL16Q14005 1332 aa28.69■■■□□ 2.18
THRA-201ENST00000264637 XRCC6P12956 609 aaKnown RBP eCLIP28.69■■■□□ 2.18
THRA-201ENST00000264637 DIAPH1O60610 1272 aaKnown RBP28.69■■■□□ 2.18
THRA-201ENST00000264637 FBLN1P23142 703 aa28.69■■■□□ 2.18
THRA-201ENST00000264637 PRAM1Q96QH2 718 aa28.68■■■□□ 2.18
THRA-201ENST00000264637 PIK3C2BO00750 1634 aa28.68■■■□□ 2.18
THRA-201ENST00000264637 CD163L1Q9NR16 1453 aa28.66■■■□□ 2.18
THRA-201ENST00000264637 NUCB1Q02818 461 aa28.66■■■□□ 2.18
THRA-201ENST00000264637 TERF2IPQ9NYB0 399 aa28.66■■■□□ 2.18
THRA-201ENST00000264637 GOLGA6L3A6NEY3 463 aa28.66■■■□□ 2.18
THRA-201ENST00000264637 PANK2Q9BZ23 570 aa28.66■■■□□ 2.18
THRA-201ENST00000264637 KIF16BQ96L93 1317 aa28.65■■■□□ 2.18
THRA-201ENST00000264637 NPM1P06748 294 aaKnown RBP eCLIP28.65■■■□□ 2.18
THRA-201ENST00000264637 HSCBQ8IWL3 235 aa28.65■■■□□ 2.18
THRA-201ENST00000264637 TRAK2O60296 914 aa28.65■■■□□ 2.18
THRA-201ENST00000264637 ZNF692Q9BU19 519 aaPredicted RBP28.65■■■□□ 2.18
THRA-201ENST00000264637 FSD2A1L4K1 749 aa28.64■■■□□ 2.18
THRA-201ENST00000264637 IPO8O15397 1037 aaKnown RBP28.64■■■□□ 2.18
THRA-201ENST00000264637 PTPRMP28827 1452 aa28.62■■■□□ 2.17
THRA-201ENST00000264637 CHD1LQ86WJ1 897 aa28.62■■■□□ 2.17
THRA-201ENST00000264637 ATAD2Q6PL18 1390 aa28.61■■■□□ 2.17
THRA-201ENST00000264637 THUMPD2Q9BTF0 503 aaKnown RBP28.61■■■□□ 2.17
THRA-201ENST00000264637 C1orf115Q9H7X2 142 aa28.61■■■□□ 2.17
THRA-201ENST00000264637 CABP1Q9NZU7 370 aa28.6■■■□□ 2.17
THRA-201ENST00000264637 PRKAR2BP31323 418 aa28.6■■■□□ 2.17
THRA-201ENST00000264637 RBM25P49756 843 aaKnown RBP28.59■■■□□ 2.17
THRA-201ENST00000264637 ALDH1L2Q3SY69 923 aa28.59■■■□□ 2.17
THRA-201ENST00000264637 PNPLA6Q8IY17 1366 aa28.59■■■□□ 2.17
THRA-201ENST00000264637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.58■■■□□ 2.16
THRA-201ENST00000264637 CDK19Q9BWU1 502 aa28.58■■■□□ 2.16
THRA-201ENST00000264637 MYO5BQ9ULV0 1848 aa28.56■■■□□ 2.16
THRA-201ENST00000264637 ANKRD45Q5TZF3 282 aa28.56■■■□□ 2.16
THRA-201ENST00000264637 HDGFL2Q7Z4V5 671 aaPredicted RBP28.56■■■□□ 2.16
THRA-201ENST00000264637 PHACTR3Q96KR7 559 aa28.56■■■□□ 2.16
THRA-201ENST00000264637 FCHSD2O94868 740 aa28.56■■■□□ 2.16
THRA-201ENST00000264637 HMOX1P09601 288 aa28.56■■■□□ 2.16
THRA-201ENST00000264637 DDIT3P35638 169 aa28.56■■■□□ 2.16
THRA-201ENST00000264637 ANKRD26Q9UPS8 1709 aa28.55■■■□□ 2.16
THRA-201ENST00000264637 LRRC7Q96NW7 1537 aa28.55■■■□□ 2.16
THRA-201ENST00000264637 MED14O60244 1454 aa28.55■■■□□ 2.16
THRA-201ENST00000264637 TSPYL6Q8N831 410 aa28.54■■■□□ 2.16
THRA-201ENST00000264637 CFAP74Q9C0B2 1584 aa28.54■■■□□ 2.16
THRA-201ENST00000264637 ZFYVE9O95405 1425 aa28.54■■■□□ 2.16
THRA-201ENST00000264637 YTHDC2Q9H6S0 1430 aaKnown RBP28.54■■■□□ 2.16
THRA-201ENST00000264637 ELL2O00472 640 aaPredicted RBP28.54■■■□□ 2.16
THRA-201ENST00000264637 ZBTB7BO15156 539 aaPredicted RBP28.54■■■□□ 2.16
THRA-201ENST00000264637 PNNQ9H307 717 aaKnown RBP28.54■■■□□ 2.16
THRA-201ENST00000264637 PPIP5K1Q6PFW1 1433 aa28.54■■■□□ 2.16
THRA-201ENST00000264637 NCOA3Q9Y6Q9 1424 aa28.54■■■□□ 2.16
THRA-201ENST00000264637 SLC52A1Q9NWF4 448 aa28.53■■■□□ 2.16
THRA-201ENST00000264637 POLKQ9UBT6 870 aa28.52■■■□□ 2.16
THRA-201ENST00000264637 SNX21Q969T3 373 aa28.51■■■□□ 2.16
THRA-201ENST00000264637 KIF2CQ99661 725 aa28.51■■■□□ 2.16
THRA-201ENST00000264637 VAMP4O75379 141 aa28.51■■■□□ 2.15
THRA-201ENST00000264637 CD2BP2O95400 341 aaKnown RBP28.51■■■□□ 2.15
THRA-201ENST00000264637 BMP2KLQ5H9B9 411 aa28.51■■■□□ 2.15
THRA-201ENST00000264637 MRPL50Q8N5N7 158 aaKnown RBP28.5■■■□□ 2.15
THRA-201ENST00000264637 TNPO1Q92973 898 aaKnown RBP28.5■■■□□ 2.15
THRA-201ENST00000264637 FOXD4L1Q9NU39 408 aa28.5■■■□□ 2.15
THRA-201ENST00000264637 ARHGAP31Q2M1Z3 1444 aa28.49■■■□□ 2.15
THRA-201ENST00000264637 FAM135BQ49AJ0 1406 aa28.49■■■□□ 2.15
THRA-201ENST00000264637 HSP90AB1P08238 724 aaKnown RBP28.49■■■□□ 2.15
THRA-201ENST00000264637 DIP2CQ9Y2E4 1556 aa28.49■■■□□ 2.15
THRA-201ENST00000264637 DDX11L8A8MPP1 907 aa28.48■■■□□ 2.15
THRA-201ENST00000264637 SIRT2Q8IXJ6 389 aa28.48■■■□□ 2.15
THRA-201ENST00000264637 FBXO31Q5XUX0 539 aaPredicted RBP28.47■■■□□ 2.15
THRA-201ENST00000264637 RBM42Q9BTD8 480 aaKnown RBP28.46■■■□□ 2.15
THRA-201ENST00000264637 BRPF1P55201 1214 aaPredicted RBP28.46■■■□□ 2.15
THRA-201ENST00000264637 NFE2L2Q16236 605 aa28.46■■■□□ 2.15
THRA-201ENST00000264637 CLTCQ00610 1675 aaKnown RBP28.45■■■□□ 2.15
THRA-201ENST00000264637 TBC1D9Q6ZT07 1266 aa28.45■■■□□ 2.15
THRA-201ENST00000264637 ARHGEF40Q8TER5 1519 aa28.45■■■□□ 2.14
THRA-201ENST00000264637 WAPLQ7Z5K2 1190 aa28.44■■■□□ 2.14
THRA-201ENST00000264637 EMILIN1Q9Y6C2 1016 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms