RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 MINK1Q8N4C8 1332 aaPredicted RBP22.59■■□□□ 1.21
TRAF4-201ENST00000262395 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
TRAF4-201ENST00000262395 NEURL4Q96JN8 1562 aa22.58■■□□□ 1.21
TRAF4-201ENST00000262395 NAP1L5Q96NT1 182 aaPredicted RBP22.58■■□□□ 1.2
TRAF4-201ENST00000262395 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
TRAF4-201ENST00000262395 ZNF692Q9BU19 519 aaPredicted RBP22.57■■□□□ 1.2
TRAF4-201ENST00000262395 SETBP1Q9Y6X0 1596 aa22.57■■□□□ 1.2
TRAF4-201ENST00000262395 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
TRAF4-201ENST00000262395 THUMPD2Q9BTF0 503 aaKnown RBP22.56■■□□□ 1.2
TRAF4-201ENST00000262395 ZC3H13Q5T200 1668 aaKnown RBP22.56■■□□□ 1.2
TRAF4-201ENST00000262395 ARAP3Q8WWN8 1544 aa22.56■■□□□ 1.2
TRAF4-201ENST00000262395 HSP90AB1P08238 724 aaKnown RBP22.56■■□□□ 1.2
TRAF4-201ENST00000262395 ABCA9Q8IUA7 1624 aa22.56■■□□□ 1.2
TRAF4-201ENST00000262395 ANKRD45Q5TZF3 282 aa22.55■■□□□ 1.2
TRAF4-201ENST00000262395 FYB1O15117 783 aa22.55■■□□□ 1.2
TRAF4-201ENST00000262395 CT47B1P0C2W7 299 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-201ENST00000262395 NUCB1Q02818 461 aa22.54■■□□□ 1.2
TRAF4-201ENST00000262395 CHD1LQ86WJ1 897 aa22.54■■□□□ 1.2
TRAF4-201ENST00000262395 TNPO1Q92973 898 aaKnown RBP22.54■■□□□ 1.2
TRAF4-201ENST00000262395 RBM42Q9BTD8 480 aaKnown RBP22.54■■□□□ 1.2
TRAF4-201ENST00000262395 CD2BP2O95400 341 aaKnown RBP22.54■■□□□ 1.2
TRAF4-201ENST00000262395 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
TRAF4-201ENST00000262395 HSP90AA1P07900 732 aaKnown RBP22.53■■□□□ 1.2
TRAF4-201ENST00000262395 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
TRAF4-201ENST00000262395 GRPEL1Q9HAV7 217 aa22.52■■□□□ 1.2
TRAF4-201ENST00000262395 PPLO60437 1756 aa22.52■■□□□ 1.2
TRAF4-201ENST00000262395 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
TRAF4-201ENST00000262395 PKNOX2Q96KN3 472 aa22.52■■□□□ 1.2
TRAF4-201ENST00000262395 IPO8O15397 1037 aaKnown RBP22.51■■□□□ 1.19
TRAF4-201ENST00000262395 ADGRB2O60241 1585 aa22.51■■□□□ 1.19
TRAF4-201ENST00000262395 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
TRAF4-201ENST00000262395 GLI2P10070 1586 aa22.5■■□□□ 1.19
TRAF4-201ENST00000262395 HMOX1P09601 288 aa22.5■■□□□ 1.19
TRAF4-201ENST00000262395 MRE11P49959 708 aa22.5■■□□□ 1.19
TRAF4-201ENST00000262395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.5■■□□□ 1.19
TRAF4-201ENST00000262395 NSD2O96028 1365 aa22.5■■□□□ 1.19
TRAF4-201ENST00000262395 DDX11L8A8MPP1 907 aa22.5■■□□□ 1.19
TRAF4-201ENST00000262395 KIF16BQ96L93 1317 aa22.5■■□□□ 1.19
TRAF4-201ENST00000262395 GAS2L3Q86XJ1 694 aa22.49■■□□□ 1.19
TRAF4-201ENST00000262395 PRKAR2BP31323 418 aa22.48■■□□□ 1.19
TRAF4-201ENST00000262395 RBM25P49756 843 aaKnown RBP22.48■■□□□ 1.19
TRAF4-201ENST00000262395 TSPYL6Q8N831 410 aa22.48■■□□□ 1.19
TRAF4-201ENST00000262395 PRAM1Q96QH2 718 aa22.48■■□□□ 1.19
TRAF4-201ENST00000262395 USP32Q8NFA0 1604 aa22.48■■□□□ 1.19
TRAF4-201ENST00000262395 ASXL2Q76L83 1435 aa22.48■■□□□ 1.19
TRAF4-201ENST00000262395 RPGRIP1LQ68CZ1 1315 aa22.47■■□□□ 1.19
TRAF4-201ENST00000262395 ABCC11Q96J66 1382 aa22.47■■□□□ 1.19
TRAF4-201ENST00000262395 DDIT3P35638 169 aa22.46■■□□□ 1.19
TRAF4-201ENST00000262395 IDI1Q13907 227 aa22.46■■□□□ 1.19
TRAF4-201ENST00000262395 KIF2CQ99661 725 aa22.46■■□□□ 1.19
TRAF4-201ENST00000262395 PHACTR3Q96KR7 559 aa22.45■■□□□ 1.18
TRAF4-201ENST00000262395 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
TRAF4-201ENST00000262395 TERF2IPQ9NYB0 399 aa22.45■■□□□ 1.18
TRAF4-201ENST00000262395 ERBB4Q15303 1308 aa22.44■■□□□ 1.18
TRAF4-201ENST00000262395 RAPGEF3O95398 923 aa22.44■■□□□ 1.18
TRAF4-201ENST00000262395 TBC1D9Q6ZT07 1266 aa22.44■■□□□ 1.18
TRAF4-201ENST00000262395 CABP1Q9NZU7 370 aa22.44■■□□□ 1.18
TRAF4-201ENST00000262395 CLCN1P35523 988 aa22.44■■□□□ 1.18
TRAF4-201ENST00000262395 LMTK2Q8IWU2 1503 aa22.43■■□□□ 1.18
TRAF4-201ENST00000262395 IL16Q14005 1332 aa22.43■■□□□ 1.18
TRAF4-201ENST00000262395 ZBTB7BO15156 539 aaPredicted RBP22.43■■□□□ 1.18
TRAF4-201ENST00000262395 COL3A1P02461 1466 aaPredicted RBP22.43■■□□□ 1.18
TRAF4-201ENST00000262395 CAMSAP1Q5T5Y3 1602 aa22.43■■□□□ 1.18
TRAF4-201ENST00000262395 ARHGEF28Q8N1W1 1705 aaKnown RBP22.43■■□□□ 1.18
TRAF4-201ENST00000262395 SNX21Q969T3 373 aa22.43■■□□□ 1.18
TRAF4-201ENST00000262395 PPIP5K1Q6PFW1 1433 aa22.42■■□□□ 1.18
TRAF4-201ENST00000262395 SSFA2P28290 1259 aa22.42■■□□□ 1.18
TRAF4-201ENST00000262395 BMP2KLQ5H9B9 411 aa22.42■■□□□ 1.18
TRAF4-201ENST00000262395 SIRT2Q8IXJ6 389 aa22.41■■□□□ 1.18
TRAF4-201ENST00000262395 ATAD2Q6PL18 1390 aa22.41■■□□□ 1.18
TRAF4-201ENST00000262395 NCOA3Q9Y6Q9 1424 aa22.41■■□□□ 1.18
TRAF4-201ENST00000262395 GAS2L2Q8NHY3 880 aa22.41■■□□□ 1.18
TRAF4-201ENST00000262395 GBP4Q96PP9 640 aa22.41■■□□□ 1.18
TRAF4-201ENST00000262395 PUS7Q96PZ0 661 aaKnown RBP22.41■■□□□ 1.18
TRAF4-201ENST00000262395 RAB3GAP1Q15042 981 aa22.4■■□□□ 1.18
TRAF4-201ENST00000262395 ALDH1L2Q3SY69 923 aa22.4■■□□□ 1.18
TRAF4-201ENST00000262395 VSIG10Q8N0Z9 540 aa22.39■■□□□ 1.18
TRAF4-201ENST00000262395 ESPNB1AK53 854 aa22.39■■□□□ 1.17
TRAF4-201ENST00000262395 VAMP4O75379 141 aa22.39■■□□□ 1.17
TRAF4-201ENST00000262395 CDK19Q9BWU1 502 aa22.39■■□□□ 1.17
TRAF4-201ENST00000262395 GLIPR1L2Q4G1C9 344 aa22.38■■□□□ 1.17
TRAF4-201ENST00000262395 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
TRAF4-201ENST00000262395 MRPL50Q8N5N7 158 aaKnown RBP22.38■■□□□ 1.17
TRAF4-201ENST00000262395 TRIM44Q96DX7 344 aaPredicted RBP22.38■■□□□ 1.17
TRAF4-201ENST00000262395 K7ELQ4 463 aaPredicted RBP22.37■■□□□ 1.17
TRAF4-201ENST00000262395 FRMPD1Q5SYB0 1578 aa22.37■■□□□ 1.17
TRAF4-201ENST00000262395 FCHSD2O94868 740 aa22.37■■□□□ 1.17
TRAF4-201ENST00000262395 APBB1O00213 710 aa22.36■■□□□ 1.17
TRAF4-201ENST00000262395 POLKQ9UBT6 870 aa22.36■■□□□ 1.17
TRAF4-201ENST00000262395 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
TRAF4-201ENST00000262395 ABCC3O15438 1527 aa22.35■■□□□ 1.17
TRAF4-201ENST00000262395 SIGLEC1Q9BZZ2 1709 aa22.35■■□□□ 1.17
TRAF4-201ENST00000262395 C16orf71Q8IYS4 520 aaPredicted RBP22.35■■□□□ 1.17
TRAF4-201ENST00000262395 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
TRAF4-201ENST00000262395 GCC1Q96CN9 775 aa22.34■■□□□ 1.17
TRAF4-201ENST00000262395 MBIPQ9NS73 344 aa22.34■■□□□ 1.17
TRAF4-201ENST00000262395 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
TRAF4-201ENST00000262395 DCTN1Q14203 1278 aa22.34■■□□□ 1.17
TRAF4-201ENST00000262395 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
TRAF4-201ENST00000262395 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms