RNA–Protein interactions for RNA: ENST00000261489.6

TSC22D1-201, Transcript of TSC22 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-201ENST00000261489 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
TSC22D1-201ENST00000261489 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
TSC22D1-201ENST00000261489 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
TSC22D1-201ENST00000261489 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.51
TSC22D1-201ENST00000261489 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
TSC22D1-201ENST00000261489 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
TSC22D1-201ENST00000261489 CPS1P31327 1500 aa11.86□□□□□ -0.51
TSC22D1-201ENST00000261489 LTV1Q96GA3 475 aaPredicted RBP11.86□□□□□ -0.51
TSC22D1-201ENST00000261489 POLKQ9UBT6 870 aa11.86□□□□□ -0.51
TSC22D1-201ENST00000261489 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
TSC22D1-201ENST00000261489 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
TSC22D1-201ENST00000261489 HMOX1P09601 288 aa11.85□□□□□ -0.51
TSC22D1-201ENST00000261489 GTF3C3Q9Y5Q9 886 aa11.85□□□□□ -0.51
TSC22D1-201ENST00000261489 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
TSC22D1-201ENST00000261489 APAF1O14727 1248 aa11.84□□□□□ -0.51
TSC22D1-201ENST00000261489 NINLQ9Y2I6 1382 aa11.83□□□□□ -0.51
TSC22D1-201ENST00000261489 HSP90AB2PQ58FF8 381 aa11.83□□□□□ -0.52
TSC22D1-201ENST00000261489 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
TSC22D1-201ENST00000261489 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
TSC22D1-201ENST00000261489 CFAP53Q96M91 514 aa11.83□□□□□ -0.52
TSC22D1-201ENST00000261489 DIP2AQ14689 1571 aa11.82□□□□□ -0.52
TSC22D1-201ENST00000261489 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
TSC22D1-201ENST00000261489 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
TSC22D1-201ENST00000261489 ADGRL3Q9HAR2 1447 aa11.82□□□□□ -0.52
TSC22D1-201ENST00000261489 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
TSC22D1-201ENST00000261489 ZC3H6P61129 1189 aaKnown RBP11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 SLAIN2Q9P270 581 aa11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 RGPD8O14715 1765 aaPredicted RBP11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 NPC1L1Q9UHC9 1359 aa11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 USP6P35125 1406 aa11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 EDC4Q6P2E9 1401 aaKnown RBP11.81□□□□□ -0.52
TSC22D1-201ENST00000261489 MSH6P52701 1360 aa11.8□□□□□ -0.52
TSC22D1-201ENST00000261489 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
TSC22D1-201ENST00000261489 AMPHP49418 695 aa11.8□□□□□ -0.52
TSC22D1-201ENST00000261489 DIAPH1O60610 1272 aaKnown RBP11.8□□□□□ -0.52
TSC22D1-201ENST00000261489 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
TSC22D1-201ENST00000261489 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
TSC22D1-201ENST00000261489 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
TSC22D1-201ENST00000261489 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
TSC22D1-201ENST00000261489 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
TSC22D1-201ENST00000261489 STRCQ7RTU9 1775 aa11.77□□□□□ -0.52
TSC22D1-201ENST00000261489 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
TSC22D1-201ENST00000261489 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
TSC22D1-201ENST00000261489 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
TSC22D1-201ENST00000261489 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
TSC22D1-201ENST00000261489 KNDC1Q76NI1 1749 aa11.76□□□□□ -0.53
TSC22D1-201ENST00000261489 C1orf167Q5SNV9 1468 aa11.76□□□□□ -0.53
TSC22D1-201ENST00000261489 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
TSC22D1-201ENST00000261489 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
TSC22D1-201ENST00000261489 POLR3AO14802 1390 aaPredicted RBP11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 NSD2O96028 1365 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 STRCP1A6NGW2 1772 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 GCP02774 474 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 PHACTR3Q96KR7 559 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
TSC22D1-201ENST00000261489 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
TSC22D1-201ENST00000261489 EIF4A2Q14240 407 aaKnown RBP11.74□□□□□ -0.53
TSC22D1-201ENST00000261489 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
TSC22D1-201ENST00000261489 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
TSC22D1-201ENST00000261489 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
TSC22D1-201ENST00000261489 LRRC59Q96AG4 307 aaKnown RBP11.73□□□□□ -0.53
TSC22D1-201ENST00000261489 MST1RQ04912 1400 aa11.72□□□□□ -0.53
TSC22D1-201ENST00000261489 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
TSC22D1-201ENST00000261489 IL13P35225 146 aa11.72□□□□□ -0.53
TSC22D1-201ENST00000261489 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
TSC22D1-201ENST00000261489 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
TSC22D1-201ENST00000261489 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 SSH2Q76I76 1423 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 FKBP8Q14318 412 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 RUNDC1Q96C34 613 aa11.71□□□□□ -0.53
TSC22D1-201ENST00000261489 ADGRB2O60241 1585 aa11.71□□□□□ -0.54
TSC22D1-201ENST00000261489 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
TSC22D1-201ENST00000261489 HOXC9P31274 260 aa11.7□□□□□ -0.54
TSC22D1-201ENST00000261489 RIPK4P57078 832 aa11.7□□□□□ -0.54
TSC22D1-201ENST00000261489 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
TSC22D1-201ENST00000261489 UBAP1LF5GYI3 381 aa11.69□□□□□ -0.54
TSC22D1-201ENST00000261489 EYA1Q99502 592 aa11.69□□□□□ -0.54
TSC22D1-201ENST00000261489 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
TSC22D1-201ENST00000261489 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
TSC22D1-201ENST00000261489 NEFMP07197 916 aa11.68□□□□□ -0.54
TSC22D1-201ENST00000261489 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
TSC22D1-201ENST00000261489 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 PLIN1O60240 522 aa11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 TMPOP42166 694 aaKnown RBP11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
TSC22D1-201ENST00000261489 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms