RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
UBQLN1-201ENST00000257468 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
UBQLN1-201ENST00000257468 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
UBQLN1-201ENST00000257468 MED14O60244 1454 aa21.36■■□□□ 1.01
UBQLN1-201ENST00000257468 MYH16Q9H6N6 1097 aa21.35■■□□□ 1.01
UBQLN1-201ENST00000257468 TMPOP42166 694 aaKnown RBP21.35■■□□□ 1.01
UBQLN1-201ENST00000257468 NRXN3Q9Y4C0 1643 aa21.34■■□□□ 1.01
UBQLN1-201ENST00000257468 TRIM35Q9UPQ4 493 aa21.34■■□□□ 1.01
UBQLN1-201ENST00000257468 DLC1Q96QB1 1528 aa21.33■■□□□ 1.01
UBQLN1-201ENST00000257468 FAM161AQ3B820 660 aa21.33■■□□□ 1.01
UBQLN1-201ENST00000257468 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
UBQLN1-201ENST00000257468 METP08581 1390 aa21.32■■□□□ 1
UBQLN1-201ENST00000257468 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
UBQLN1-201ENST00000257468 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
UBQLN1-201ENST00000257468 NCBP3Q53F19 620 aaKnown RBP21.3■■□□□ 1
UBQLN1-201ENST00000257468 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
UBQLN1-201ENST00000257468 ZMYM3Q14202 1370 aa21.3■■□□□ 1
UBQLN1-201ENST00000257468 PNPLA6Q8IY17 1366 aa21.29■■□□□ 1
UBQLN1-201ENST00000257468 EXOSC9Q06265 439 aaKnown RBP21.29■■□□□ 1
UBQLN1-201ENST00000257468 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
UBQLN1-201ENST00000257468 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
UBQLN1-201ENST00000257468 PCDHB15Q9Y5E8 787 aa21.29■■□□□ 1
UBQLN1-201ENST00000257468 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
UBQLN1-201ENST00000257468 ATP7BP35670 1465 aa21.28■■□□□ 1
UBQLN1-201ENST00000257468 RIPK4P57078 832 aa21.27■■□□□ 1
UBQLN1-201ENST00000257468 POLKQ9UBT6 870 aa21.27■■□□□ 1
UBQLN1-201ENST00000257468 LRRC7Q96NW7 1537 aa21.26■□□□□ 0.99
UBQLN1-201ENST00000257468 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
UBQLN1-201ENST00000257468 PPIP5K1Q6PFW1 1433 aa21.26■□□□□ 0.99
UBQLN1-201ENST00000257468 WASLO00401 505 aaPredicted RBP21.25■□□□□ 0.99
UBQLN1-201ENST00000257468 NME9Q86XW9 330 aa21.24■□□□□ 0.99
UBQLN1-201ENST00000257468 MAP2P11137 1827 aaKnown RBP21.24■□□□□ 0.99
UBQLN1-201ENST00000257468 SLC4A3P48751 1232 aa21.24■□□□□ 0.99
UBQLN1-201ENST00000257468 SMC4Q9NTJ3 1288 aa21.24■□□□□ 0.99
UBQLN1-201ENST00000257468 EMILIN1Q9Y6C2 1016 aa21.24■□□□□ 0.99
UBQLN1-201ENST00000257468 PRKAR2BP31323 418 aa21.22■□□□□ 0.99
UBQLN1-201ENST00000257468 SSH1Q8WYL5 1049 aa21.22■□□□□ 0.99
UBQLN1-201ENST00000257468 HMOX1P09601 288 aa21.22■□□□□ 0.99
UBQLN1-201ENST00000257468 ZKSCAN2Q63HK3 967 aa21.22■□□□□ 0.99
UBQLN1-201ENST00000257468 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
UBQLN1-201ENST00000257468 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
UBQLN1-201ENST00000257468 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
UBQLN1-201ENST00000257468 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
UBQLN1-201ENST00000257468 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
UBQLN1-201ENST00000257468 MVPQ14764 893 aaKnown RBP21.21■□□□□ 0.99
UBQLN1-201ENST00000257468 FTSJ3Q8IY81 847 aaKnown RBP21.21■□□□□ 0.99
UBQLN1-201ENST00000257468 DZIP1LQ8IYY4 767 aaKnown RBP21.2■□□□□ 0.98
UBQLN1-201ENST00000257468 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
UBQLN1-201ENST00000257468 EDC4Q6P2E9 1401 aaKnown RBP21.2■□□□□ 0.98
UBQLN1-201ENST00000257468 DEKP35659 375 aaKnown RBP21.2■□□□□ 0.98
UBQLN1-201ENST00000257468 PMFBP1Q8TBY8 1022 aa21.2■□□□□ 0.98
UBQLN1-201ENST00000257468 TNRQ92752 1358 aa21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 FAM135BQ49AJ0 1406 aa21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 FCHSD2O94868 740 aa21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 TRIM27P14373 513 aa21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 CPS1P31327 1500 aa21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 VIRMAQ69YN4 1812 aaKnown RBP21.19■□□□□ 0.98
UBQLN1-201ENST00000257468 CT47B1P0C2W7 299 aaPredicted RBP21.18■□□□□ 0.98
UBQLN1-201ENST00000257468 IL16Q14005 1332 aa21.18■□□□□ 0.98
UBQLN1-201ENST00000257468 THUMPD2Q9BTF0 503 aaKnown RBP21.17■□□□□ 0.98
UBQLN1-201ENST00000257468 KNDC1Q76NI1 1749 aa21.17■□□□□ 0.98
UBQLN1-201ENST00000257468 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 NOB1Q9ULX3 412 aaKnown RBP21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 UBR1Q8IWV7 1749 aa21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 SEC24BO95487 1268 aa21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 RRS1Q15050 365 aaKnown RBP21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 PDZRN3Q9UPQ7 1066 aa21.16■□□□□ 0.98
UBQLN1-201ENST00000257468 AAMPQ13685 434 aa21.15■□□□□ 0.98
UBQLN1-201ENST00000257468 PRR36Q9H6K5 1346 aa21.15■□□□□ 0.98
UBQLN1-201ENST00000257468 TMEM2Q9UHN6 1383 aa21.15■□□□□ 0.98
UBQLN1-201ENST00000257468 TECPR2O15040 1411 aa21.14■□□□□ 0.97
UBQLN1-201ENST00000257468 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.97
UBQLN1-201ENST00000257468 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.97
UBQLN1-201ENST00000257468 MON2Q7Z3U7 1717 aa21.14■□□□□ 0.97
UBQLN1-201ENST00000257468 IL13P35225 146 aa21.13■□□□□ 0.97
UBQLN1-201ENST00000257468 ITPRIPQ8IWB1 547 aa21.13■□□□□ 0.97
UBQLN1-201ENST00000257468 ATF7IPQ6VMQ6 1270 aa21.13■□□□□ 0.97
UBQLN1-201ENST00000257468 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
UBQLN1-201ENST00000257468 USP19O94966 1318 aa21.12■□□□□ 0.97
UBQLN1-201ENST00000257468 NUTM2FA1L443 756 aa21.12■□□□□ 0.97
UBQLN1-201ENST00000257468 NEFMP07197 916 aa21.12■□□□□ 0.97
UBQLN1-201ENST00000257468 CDK12Q9NYV4 1490 aaPredicted RBP21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 COG3Q96JB2 828 aa21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 AKAP12Q02952 1782 aa21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 TMEM57Q8N5G2 664 aa21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 ADAMTS13Q76LX8 1427 aa21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
UBQLN1-201ENST00000257468 LTKP29376 864 aa21.1■□□□□ 0.97
UBQLN1-201ENST00000257468 CEBPAP49715 358 aaPredicted RBP21.1■□□□□ 0.97
UBQLN1-201ENST00000257468 C3P01024 1663 aa21.1■□□□□ 0.97
UBQLN1-201ENST00000257468 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.97
UBQLN1-201ENST00000257468 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.08■□□□□ 0.97
UBQLN1-201ENST00000257468 AATKQ6ZMQ8 1374 aa21.08■□□□□ 0.96
UBQLN1-201ENST00000257468 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.96
UBQLN1-201ENST00000257468 SIRT1Q96EB6 747 aa21.08■□□□□ 0.96
UBQLN1-201ENST00000257468 DDX19BQ9UMR2 479 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms