RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ADGRL1O94910 1474 aa23.39■■□□□ 1.33
PPFIA1-201ENST00000253925 ERC2O15083 957 aa23.39■■□□□ 1.33
PPFIA1-201ENST00000253925 A0A0U1RQG5 324 aaPredicted RBP23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 MCM2P49736 904 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 NFE2L2Q16236 605 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 SULT6B1Q6IMI4 303 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 FAM184AQ8NB25 1140 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 TXNDC2Q86VQ3 553 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 CIZ1Q9ULV3 898 aaPredicted RBP23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 NASPP49321 788 aaPredicted RBP23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 NLRP6P59044 892 aa23.38■■□□□ 1.33
PPFIA1-201ENST00000253925 RNF20Q5VTR2 975 aa23.37■■□□□ 1.33
PPFIA1-201ENST00000253925 SMC3Q9UQE7 1217 aa23.37■■□□□ 1.33
PPFIA1-201ENST00000253925 MCM4P33991 863 aa23.37■■□□□ 1.33
PPFIA1-201ENST00000253925 SSH1Q8WYL5 1049 aa23.37■■□□□ 1.33
PPFIA1-201ENST00000253925 PZPP20742 1482 aa23.36■■□□□ 1.33
PPFIA1-201ENST00000253925 G3BP1Q13283 466 aaKnown RBP eCLIP23.36■■□□□ 1.33
PPFIA1-201ENST00000253925 DNMT1P26358 1616 aaKnown RBP23.36■■□□□ 1.33
PPFIA1-201ENST00000253925 K7ELQ4 463 aaPredicted RBP23.36■■□□□ 1.33
PPFIA1-201ENST00000253925 SHANK2Q9UPX8 1470 aa23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 SF3A1Q15459 793 aaKnown RBP23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 GNAI2P04899 355 aa23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 PSME1Q06323 249 aa23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 ALDH1L2Q3SY69 923 aa23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 CCDC34Q96HJ3 373 aa23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 TESK2Q96S53 571 aa23.35■■□□□ 1.33
PPFIA1-201ENST00000253925 SLC4A2P04920 1241 aa23.34■■□□□ 1.33
PPFIA1-201ENST00000253925 NEK4P51957 841 aa23.34■■□□□ 1.33
PPFIA1-201ENST00000253925 NSD2O96028 1365 aa23.34■■□□□ 1.33
PPFIA1-201ENST00000253925 CCT4P50991 539 aaKnown RBP23.34■■□□□ 1.33
PPFIA1-201ENST00000253925 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
PPFIA1-201ENST00000253925 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.33■■□□□ 1.33
PPFIA1-201ENST00000253925 MBD3O95983 291 aa23.33■■□□□ 1.33
PPFIA1-201ENST00000253925 TEX14Q8IWB6 1497 aa23.33■■□□□ 1.32
PPFIA1-201ENST00000253925 TTC5Q8N0Z6 440 aa23.33■■□□□ 1.32
PPFIA1-201ENST00000253925 ASXL1Q8IXJ9 1541 aa23.32■■□□□ 1.32
PPFIA1-201ENST00000253925 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
PPFIA1-201ENST00000253925 CWC22Q9HCG8 908 aaKnown RBP23.32■■□□□ 1.32
PPFIA1-201ENST00000253925 UHRF1BP1Q6BDS2 1440 aa23.32■■□□□ 1.32
PPFIA1-201ENST00000253925 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
PPFIA1-201ENST00000253925 SURF6O75683 361 aaKnown RBP23.31■■□□□ 1.32
PPFIA1-201ENST00000253925 RPAP2Q8IXW5 612 aaPredicted RBP23.31■■□□□ 1.32
PPFIA1-201ENST00000253925 NOS1P29475 1434 aa23.3■■□□□ 1.32
PPFIA1-201ENST00000253925 GOLGA6L19H0YKK7 550 aa23.3■■□□□ 1.32
PPFIA1-201ENST00000253925 LRRFIP1Q32MZ4 808 aaKnown RBP23.3■■□□□ 1.32
PPFIA1-201ENST00000253925 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
PPFIA1-201ENST00000253925 CAVIN1Q6NZI2 390 aaKnown RBP23.3■■□□□ 1.32
PPFIA1-201ENST00000253925 CNTROBQ8N137 903 aa23.3■■□□□ 1.32
PPFIA1-201ENST00000253925 VPS37CA5D8V6 355 aaPredicted RBP23.29■■□□□ 1.32
PPFIA1-201ENST00000253925 PLCH2O75038 1416 aa23.29■■□□□ 1.32
PPFIA1-201ENST00000253925 CLASRPQ8N2M8 674 aaKnown RBP23.29■■□□□ 1.32
PPFIA1-201ENST00000253925 PER1O15534 1290 aaPredicted RBP23.28■■□□□ 1.32
PPFIA1-201ENST00000253925 CCDC61Q9Y6R9 512 aa23.28■■□□□ 1.32
PPFIA1-201ENST00000253925 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.28■■□□□ 1.32
PPFIA1-201ENST00000253925 SYCP2Q9BX26 1530 aa23.28■■□□□ 1.32
PPFIA1-201ENST00000253925 CD109Q6YHK3 1445 aa23.28■■□□□ 1.32
PPFIA1-201ENST00000253925 BECN2A8MW95 431 aa23.27■■□□□ 1.32
PPFIA1-201ENST00000253925 FANCAO15360 1455 aa23.27■■□□□ 1.32
PPFIA1-201ENST00000253925 IGHDP01880 384 aa23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 ADGRL2O95490 1459 aa23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 PODXL2Q9NZ53 605 aa23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 TRIM27P14373 513 aa23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 RRS1Q15050 365 aaKnown RBP23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 CCDC9Q9Y3X0 531 aaKnown RBP23.26■■□□□ 1.31
PPFIA1-201ENST00000253925 PRPF40AO75400 957 aaKnown RBP23.25■■□□□ 1.31
PPFIA1-201ENST00000253925 LRRCC1Q9C099 1032 aa23.25■■□□□ 1.31
PPFIA1-201ENST00000253925 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
PPFIA1-201ENST00000253925 CCDC173Q0VFZ6 552 aa23.24■■□□□ 1.31
PPFIA1-201ENST00000253925 ABTB2Q8N961 1025 aa23.23■■□□□ 1.31
PPFIA1-201ENST00000253925 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
PPFIA1-201ENST00000253925 NUDT16Q96DE0 195 aaKnown RBP23.23■■□□□ 1.31
PPFIA1-201ENST00000253925 ZNF771Q7L3S4 317 aaPredicted RBP23.23■■□□□ 1.31
PPFIA1-201ENST00000253925 THUMPD2Q9BTF0 503 aaKnown RBP23.23■■□□□ 1.31
PPFIA1-201ENST00000253925 TBC1D2Q9BYX2 928 aa23.23■■□□□ 1.31
PPFIA1-201ENST00000253925 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
PPFIA1-201ENST00000253925 BICD2Q8TD16 824 aa23.22■■□□□ 1.31
PPFIA1-201ENST00000253925 IDI1Q13907 227 aa23.22■■□□□ 1.31
PPFIA1-201ENST00000253925 RAPGEF4Q8WZA2 1011 aa23.22■■□□□ 1.31
PPFIA1-201ENST00000253925 CCDC39Q9UFE4 941 aa23.22■■□□□ 1.31
PPFIA1-201ENST00000253925 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
PPFIA1-201ENST00000253925 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
PPFIA1-201ENST00000253925 IL16Q14005 1332 aa23.21■■□□□ 1.31
PPFIA1-201ENST00000253925 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
PPFIA1-201ENST00000253925 DISP1Q96F81 1524 aa23.21■■□□□ 1.31
PPFIA1-201ENST00000253925 SRCIN1Q9C0H9 1055 aa23.21■■□□□ 1.31
PPFIA1-201ENST00000253925 PSMA5P28066 241 aa23.2■■□□□ 1.31
PPFIA1-201ENST00000253925 CPLX2Q6PUV4 134 aaKnown RBP23.2■■□□□ 1.31
PPFIA1-201ENST00000253925 RNF123Q5XPI4 1314 aa23.2■■□□□ 1.3
PPFIA1-201ENST00000253925 COL17A1Q9UMD9 1497 aaPredicted RBP23.2■■□□□ 1.3
PPFIA1-201ENST00000253925 RNF214Q8ND24 703 aa23.19■■□□□ 1.3
PPFIA1-201ENST00000253925 POLR3AO14802 1390 aaPredicted RBP23.19■■□□□ 1.3
PPFIA1-201ENST00000253925 TOMM22Q9NS69 142 aa23.19■■□□□ 1.3
PPFIA1-201ENST00000253925 GCC2Q8IWJ2 1684 aa23.18■■□□□ 1.3
PPFIA1-201ENST00000253925 TBC1D32Q96NH3 1257 aa23.18■■□□□ 1.3
PPFIA1-201ENST00000253925 CCDC27Q2M243 656 aa23.18■■□□□ 1.3
PPFIA1-201ENST00000253925 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms