RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
CACTIN-202ENST00000248420 ELL2O00472 640 aaPredicted RBP25.25■■□□□ 1.63
CACTIN-202ENST00000248420 CD2BP2O95400 341 aaKnown RBP25.25■■□□□ 1.63
CACTIN-202ENST00000248420 ADGRB3O60242 1522 aa25.24■■□□□ 1.63
CACTIN-202ENST00000248420 UBE2Q2Q8WVN8 375 aa25.24■■□□□ 1.63
CACTIN-202ENST00000248420 TNPO1Q92973 898 aaKnown RBP25.24■■□□□ 1.63
CACTIN-202ENST00000248420 RBM42Q9BTD8 480 aaKnown RBP25.24■■□□□ 1.63
CACTIN-202ENST00000248420 THUMPD2Q9BTF0 503 aaKnown RBP25.24■■□□□ 1.63
CACTIN-202ENST00000248420 MINK1Q8N4C8 1332 aaPredicted RBP25.24■■□□□ 1.63
CACTIN-202ENST00000248420 ANKRD45Q5TZF3 282 aa25.24■■□□□ 1.63
CACTIN-202ENST00000248420 NEURL4Q96JN8 1562 aa25.23■■□□□ 1.63
CACTIN-202ENST00000248420 HSP90AB1P08238 724 aaKnown RBP25.23■■□□□ 1.63
CACTIN-202ENST00000248420 NUCB1Q02818 461 aa25.23■■□□□ 1.63
CACTIN-202ENST00000248420 FYB1O15117 783 aa25.22■■□□□ 1.63
CACTIN-202ENST00000248420 CHD1LQ86WJ1 897 aa25.22■■□□□ 1.63
CACTIN-202ENST00000248420 TULP4Q9NRJ4 1543 aa25.22■■□□□ 1.63
CACTIN-202ENST00000248420 CT47B1P0C2W7 299 aaPredicted RBP25.22■■□□□ 1.63
CACTIN-202ENST00000248420 GRPEL1Q9HAV7 217 aa25.22■■□□□ 1.63
CACTIN-202ENST00000248420 SETBP1Q9Y6X0 1596 aa25.22■■□□□ 1.63
CACTIN-202ENST00000248420 PNNQ9H307 717 aaKnown RBP25.21■■□□□ 1.63
CACTIN-202ENST00000248420 GAS2L3Q86XJ1 694 aa25.2■■□□□ 1.63
CACTIN-202ENST00000248420 HSP90AA1P07900 732 aaKnown RBP25.2■■□□□ 1.62
CACTIN-202ENST00000248420 MRE11P49959 708 aa25.19■■□□□ 1.62
CACTIN-202ENST00000248420 ARAP3Q8WWN8 1544 aa25.19■■□□□ 1.62
CACTIN-202ENST00000248420 ZC3H13Q5T200 1668 aaKnown RBP25.19■■□□□ 1.62
CACTIN-202ENST00000248420 ABCA9Q8IUA7 1624 aa25.18■■□□□ 1.62
CACTIN-202ENST00000248420 DDX11L8A8MPP1 907 aa25.18■■□□□ 1.62
CACTIN-202ENST00000248420 DIAPH1O60610 1272 aaKnown RBP25.18■■□□□ 1.62
CACTIN-202ENST00000248420 RBM25P49756 843 aaKnown RBP25.18■■□□□ 1.62
CACTIN-202ENST00000248420 IPO8O15397 1037 aaKnown RBP25.17■■□□□ 1.62
CACTIN-202ENST00000248420 ADGRB2O60241 1585 aa25.17■■□□□ 1.62
CACTIN-202ENST00000248420 HMOX1P09601 288 aa25.17■■□□□ 1.62
CACTIN-202ENST00000248420 DDIT3P35638 169 aa25.17■■□□□ 1.62
CACTIN-202ENST00000248420 KIF2CQ99661 725 aa25.17■■□□□ 1.62
CACTIN-202ENST00000248420 KIDINS220Q9ULH0 1771 aa25.16■■□□□ 1.62
CACTIN-202ENST00000248420 ERBB4Q15303 1308 aa25.16■■□□□ 1.62
CACTIN-202ENST00000248420 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
CACTIN-202ENST00000248420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.16■■□□□ 1.62
CACTIN-202ENST00000248420 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
CACTIN-202ENST00000248420 KIF16BQ96L93 1317 aa25.15■■□□□ 1.62
CACTIN-202ENST00000248420 NSD2O96028 1365 aa25.15■■□□□ 1.62
CACTIN-202ENST00000248420 PRKAR2BP31323 418 aa25.14■■□□□ 1.62
CACTIN-202ENST00000248420 PPLO60437 1756 aa25.14■■□□□ 1.62
CACTIN-202ENST00000248420 GLI2P10070 1586 aa25.14■■□□□ 1.61
CACTIN-202ENST00000248420 CLCN1P35523 988 aa25.14■■□□□ 1.61
CACTIN-202ENST00000248420 ABCC11Q96J66 1382 aa25.13■■□□□ 1.61
CACTIN-202ENST00000248420 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
CACTIN-202ENST00000248420 PHACTR3Q96KR7 559 aa25.13■■□□□ 1.61
CACTIN-202ENST00000248420 IDI1Q13907 227 aa25.12■■□□□ 1.61
CACTIN-202ENST00000248420 NCBP3Q53F19 620 aaKnown RBP25.12■■□□□ 1.61
CACTIN-202ENST00000248420 TBC1D9Q6ZT07 1266 aa25.12■■□□□ 1.61
CACTIN-202ENST00000248420 RPGRIP1LQ68CZ1 1315 aa25.11■■□□□ 1.61
CACTIN-202ENST00000248420 ZBTB7BO15156 539 aaPredicted RBP25.11■■□□□ 1.61
CACTIN-202ENST00000248420 SNX21Q969T3 373 aa25.11■■□□□ 1.61
CACTIN-202ENST00000248420 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
CACTIN-202ENST00000248420 ASXL2Q76L83 1435 aa25.1■■□□□ 1.61
CACTIN-202ENST00000248420 CABP1Q9NZU7 370 aa25.1■■□□□ 1.61
CACTIN-202ENST00000248420 PPIP5K1Q6PFW1 1433 aa25.1■■□□□ 1.61
CACTIN-202ENST00000248420 SIRT2Q8IXJ6 389 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 SSFA2P28290 1259 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 BMP2KLQ5H9B9 411 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 NCOA3Q9Y6Q9 1424 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 IL16Q14005 1332 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 COL3A1P02461 1466 aaPredicted RBP25.09■■□□□ 1.61
CACTIN-202ENST00000248420 RAPGEF3O95398 923 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 RAB3GAP1Q15042 981 aa25.09■■□□□ 1.61
CACTIN-202ENST00000248420 ATAD2Q6PL18 1390 aa25.08■■□□□ 1.61
CACTIN-202ENST00000248420 TERF2IPQ9NYB0 399 aa25.08■■□□□ 1.61
CACTIN-202ENST00000248420 GAS2L2Q8NHY3 880 aa25.08■■□□□ 1.6
CACTIN-202ENST00000248420 ESPNB1AK53 854 aa25.07■■□□□ 1.6
CACTIN-202ENST00000248420 GBP4Q96PP9 640 aa25.07■■□□□ 1.6
CACTIN-202ENST00000248420 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
CACTIN-202ENST00000248420 ALDH1L2Q3SY69 923 aa25.06■■□□□ 1.6
CACTIN-202ENST00000248420 CAMSAP1Q5T5Y3 1602 aa25.05■■□□□ 1.6
CACTIN-202ENST00000248420 VAMP4O75379 141 aa25.05■■□□□ 1.6
CACTIN-202ENST00000248420 PUS7Q96PZ0 661 aaKnown RBP25.05■■□□□ 1.6
CACTIN-202ENST00000248420 TRIM44Q96DX7 344 aaPredicted RBP25.05■■□□□ 1.6
CACTIN-202ENST00000248420 ARHGEF28Q8N1W1 1705 aaKnown RBP25.04■■□□□ 1.6
CACTIN-202ENST00000248420 K7ELQ4 463 aaPredicted RBP25.04■■□□□ 1.6
CACTIN-202ENST00000248420 MRPL50Q8N5N7 158 aaKnown RBP25.04■■□□□ 1.6
CACTIN-202ENST00000248420 CDK19Q9BWU1 502 aa25.03■■□□□ 1.6
CACTIN-202ENST00000248420 C16orf71Q8IYS4 520 aaPredicted RBP25.02■■□□□ 1.6
CACTIN-202ENST00000248420 FCHSD2O94868 740 aa25.01■■□□□ 1.59
CACTIN-202ENST00000248420 APBB1O00213 710 aa25.01■■□□□ 1.59
CACTIN-202ENST00000248420 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
CACTIN-202ENST00000248420 FAM83GA6ND36 823 aa25■■□□□ 1.59
CACTIN-202ENST00000248420 HDGFL2Q7Z4V5 671 aaPredicted RBP25■■□□□ 1.59
CACTIN-202ENST00000248420 DCTN1Q14203 1278 aa25■■□□□ 1.59
CACTIN-202ENST00000248420 GCC1Q96CN9 775 aa25■■□□□ 1.59
CACTIN-202ENST00000248420 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
CACTIN-202ENST00000248420 FRMPD1Q5SYB0 1578 aa25■■□□□ 1.59
CACTIN-202ENST00000248420 MBIPQ9NS73 344 aa24.99■■□□□ 1.59
CACTIN-202ENST00000248420 GSPT1P15170 499 aaKnown RBP24.99■■□□□ 1.59
CACTIN-202ENST00000248420 CIZ1Q9ULV3 898 aaPredicted RBP24.99■■□□□ 1.59
CACTIN-202ENST00000248420 CD163L1Q9NR16 1453 aa24.99■■□□□ 1.59
CACTIN-202ENST00000248420 C8orf58Q8NAV2 365 aa24.99■■□□□ 1.59
CACTIN-202ENST00000248420 ZRANB1Q9UGI0 708 aa24.98■■□□□ 1.59
CACTIN-202ENST00000248420 NCLP19338 710 aaKnown RBP24.97■■□□□ 1.59
CACTIN-202ENST00000248420 DDX49Q9Y6V7 483 aaKnown RBP24.97■■□□□ 1.59
CACTIN-202ENST00000248420 ABCC3O15438 1527 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms