RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
SUGP1-201ENST00000247001 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.21
SUGP1-201ENST00000247001 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.21
SUGP1-201ENST00000247001 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
SUGP1-201ENST00000247001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.2
SUGP1-201ENST00000247001 IQSEC2Q5JU85 1478 aa16.32■□□□□ 0.2
SUGP1-201ENST00000247001 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
SUGP1-201ENST00000247001 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
SUGP1-201ENST00000247001 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
SUGP1-201ENST00000247001 USP32Q8NFA0 1604 aa16.3■□□□□ 0.2
SUGP1-201ENST00000247001 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
SUGP1-201ENST00000247001 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
SUGP1-201ENST00000247001 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
SUGP1-201ENST00000247001 CCDC61Q9Y6R9 512 aa16.29■□□□□ 0.2
SUGP1-201ENST00000247001 ATP7BP35670 1465 aa16.28■□□□□ 0.2
SUGP1-201ENST00000247001 ADGRB2O60241 1585 aa16.28■□□□□ 0.2
SUGP1-201ENST00000247001 RGPD8O14715 1765 aaPredicted RBP16.27■□□□□ 0.2
SUGP1-201ENST00000247001 PKNOX2Q96KN3 472 aa16.27■□□□□ 0.2
SUGP1-201ENST00000247001 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.19
SUGP1-201ENST00000247001 BRINP3Q76B58 766 aa16.27■□□□□ 0.19
SUGP1-201ENST00000247001 FYB1O15117 783 aa16.26■□□□□ 0.19
SUGP1-201ENST00000247001 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
SUGP1-201ENST00000247001 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
SUGP1-201ENST00000247001 NALCNQ8IZF0 1738 aa16.26■□□□□ 0.19
SUGP1-201ENST00000247001 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
SUGP1-201ENST00000247001 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
SUGP1-201ENST00000247001 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
SUGP1-201ENST00000247001 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
SUGP1-201ENST00000247001 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
SUGP1-201ENST00000247001 NSD2O96028 1365 aa16.24■□□□□ 0.19
SUGP1-201ENST00000247001 CDC42BPGQ6DT37 1551 aa16.24■□□□□ 0.19
SUGP1-201ENST00000247001 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
SUGP1-201ENST00000247001 MTHFSP49914 203 aa16.23■□□□□ 0.19
SUGP1-201ENST00000247001 ROBO1Q9Y6N7 1651 aa16.23■□□□□ 0.19
SUGP1-201ENST00000247001 MST1RQ04912 1400 aa16.23■□□□□ 0.19
SUGP1-201ENST00000247001 ANKRD26Q9UPS8 1709 aa16.22■□□□□ 0.19
SUGP1-201ENST00000247001 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
SUGP1-201ENST00000247001 ACEP12821 1306 aa16.22■□□□□ 0.19
SUGP1-201ENST00000247001 NME9Q86XW9 330 aa16.22■□□□□ 0.19
SUGP1-201ENST00000247001 AKAP12Q02952 1782 aa16.22■□□□□ 0.19
SUGP1-201ENST00000247001 TOPAZ1Q8N9V7 1692 aa16.22■□□□□ 0.19
SUGP1-201ENST00000247001 FBLN1P23142 703 aa16.21■□□□□ 0.19
SUGP1-201ENST00000247001 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.19
SUGP1-201ENST00000247001 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
SUGP1-201ENST00000247001 FOXO3O43524 673 aa16.21■□□□□ 0.19
SUGP1-201ENST00000247001 MON2Q7Z3U7 1717 aa16.21■□□□□ 0.18
SUGP1-201ENST00000247001 PODXL2Q9NZ53 605 aa16.2■□□□□ 0.18
SUGP1-201ENST00000247001 CCDC146Q8IYE0 955 aa16.2■□□□□ 0.18
SUGP1-201ENST00000247001 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
SUGP1-201ENST00000247001 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
SUGP1-201ENST00000247001 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
SUGP1-201ENST00000247001 NGDNQ8NEJ9 315 aaKnown RBP16.19■□□□□ 0.18
SUGP1-201ENST00000247001 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
SUGP1-201ENST00000247001 FMN2Q9NZ56 1722 aa16.17■□□□□ 0.18
SUGP1-201ENST00000247001 CFAP53Q96M91 514 aa16.17■□□□□ 0.18
SUGP1-201ENST00000247001 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
SUGP1-201ENST00000247001 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
SUGP1-201ENST00000247001 PLEKHG3A1L390 1219 aa16.16■□□□□ 0.18
SUGP1-201ENST00000247001 MAP2P11137 1827 aaKnown RBP16.15■□□□□ 0.18
SUGP1-201ENST00000247001 SHPRHQ149N8 1683 aa16.15■□□□□ 0.18
SUGP1-201ENST00000247001 COG3Q96JB2 828 aa16.15■□□□□ 0.18
SUGP1-201ENST00000247001 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
SUGP1-201ENST00000247001 SOX12O15370 315 aa16.14■□□□□ 0.17
SUGP1-201ENST00000247001 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
SUGP1-201ENST00000247001 USP6P35125 1406 aa16.14■□□□□ 0.17
SUGP1-201ENST00000247001 DCCP43146 1447 aa16.14■□□□□ 0.17
SUGP1-201ENST00000247001 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
SUGP1-201ENST00000247001 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
SUGP1-201ENST00000247001 NUTM2BA6NNL0 878 aaPredicted RBP16.11■□□□□ 0.17
SUGP1-201ENST00000247001 NUTM2EB1AL46 878 aaPredicted RBP16.11■□□□□ 0.17
SUGP1-201ENST00000247001 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
SUGP1-201ENST00000247001 NUTM2AQ8IVF1 878 aaPredicted RBP16.11■□□□□ 0.17
SUGP1-201ENST00000247001 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
SUGP1-201ENST00000247001 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
SUGP1-201ENST00000247001 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
SUGP1-201ENST00000247001 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
SUGP1-201ENST00000247001 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
SUGP1-201ENST00000247001 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
SUGP1-201ENST00000247001 APAF1O14727 1248 aa16.1■□□□□ 0.17
SUGP1-201ENST00000247001 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
SUGP1-201ENST00000247001 POLKQ9UBT6 870 aa16.09■□□□□ 0.17
SUGP1-201ENST00000247001 PHLPP1O60346 1717 aa16.09■□□□□ 0.17
SUGP1-201ENST00000247001 PHF8Q9UPP1 1060 aa16.09■□□□□ 0.17
SUGP1-201ENST00000247001 NEUROD2Q15784 382 aa16.08■□□□□ 0.17
SUGP1-201ENST00000247001 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.17
SUGP1-201ENST00000247001 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SUGP1-201ENST00000247001 INSRP06213 1382 aa16.07■□□□□ 0.16
SUGP1-201ENST00000247001 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
SUGP1-201ENST00000247001 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
SUGP1-201ENST00000247001 RRP7AQ9Y3A4 280 aaKnown RBP16.06■□□□□ 0.16
SUGP1-201ENST00000247001 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
SUGP1-201ENST00000247001 KRT28Q7Z3Y7 464 aa16.06■□□□□ 0.16
SUGP1-201ENST00000247001 CABLES1Q8TDN4 633 aa16.06■□□□□ 0.16
SUGP1-201ENST00000247001 COL16A1Q07092 1604 aaPredicted RBP16.06■□□□□ 0.16
SUGP1-201ENST00000247001 PSME1Q06323 249 aa16.05■□□□□ 0.16
SUGP1-201ENST00000247001 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
SUGP1-201ENST00000247001 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
SUGP1-201ENST00000247001 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
SUGP1-201ENST00000247001 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
SUGP1-201ENST00000247001 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms