RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 POGKQ9P215 609 aa15.3■□□□□ 0.04
SEC61A1-201ENST00000243253 NUTM2FA1L443 756 aa15.28■□□□□ 0.04
SEC61A1-201ENST00000243253 DDIT3P35638 169 aa15.28■□□□□ 0.04
SEC61A1-201ENST00000243253 CT47B1P0C2W7 299 aaPredicted RBP15.28■□□□□ 0.04
SEC61A1-201ENST00000243253 RAPGEF3O95398 923 aa15.27■□□□□ 0.04
SEC61A1-201ENST00000243253 HDAC1Q13547 482 aaPredicted RBP15.27■□□□□ 0.04
SEC61A1-201ENST00000243253 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
SEC61A1-201ENST00000243253 FBLN1P23142 703 aa15.27■□□□□ 0.03
SEC61A1-201ENST00000243253 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
SEC61A1-201ENST00000243253 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
SEC61A1-201ENST00000243253 SRPK2P78362 688 aaKnown RBP15.26■□□□□ 0.03
SEC61A1-201ENST00000243253 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
SEC61A1-201ENST00000243253 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
SEC61A1-201ENST00000243253 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
SEC61A1-201ENST00000243253 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
SEC61A1-201ENST00000243253 U2AF1L5P0DN76 240 aaPredicted RBP15.25■□□□□ 0.03
SEC61A1-201ENST00000243253 TRIM27P14373 513 aa15.25■□□□□ 0.03
SEC61A1-201ENST00000243253 U2AF1Q01081 240 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEC61A1-201ENST00000243253 ARHGEF40Q8TER5 1519 aa15.25■□□□□ 0.03
SEC61A1-201ENST00000243253 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
SEC61A1-201ENST00000243253 MAP2P11137 1827 aaKnown RBP15.24■□□□□ 0.03
SEC61A1-201ENST00000243253 KNDC1Q76NI1 1749 aa15.24■□□□□ 0.03
SEC61A1-201ENST00000243253 FSD2A1L4K1 749 aa15.24■□□□□ 0.03
SEC61A1-201ENST00000243253 SMC5Q8IY18 1101 aa15.24■□□□□ 0.03
SEC61A1-201ENST00000243253 IL16Q14005 1332 aa15.23■□□□□ 0.03
SEC61A1-201ENST00000243253 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
SEC61A1-201ENST00000243253 EVC2Q86UK5 1308 aa15.23■□□□□ 0.03
SEC61A1-201ENST00000243253 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
SEC61A1-201ENST00000243253 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
SEC61A1-201ENST00000243253 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
SEC61A1-201ENST00000243253 TMPOP42166 694 aaKnown RBP15.22■□□□□ 0.03
SEC61A1-201ENST00000243253 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
SEC61A1-201ENST00000243253 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
SEC61A1-201ENST00000243253 ZBTB40Q9NUA8 1239 aa15.22■□□□□ 0.03
SEC61A1-201ENST00000243253 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
SEC61A1-201ENST00000243253 ZKSCAN2Q63HK3 967 aa15.21■□□□□ 0.03
SEC61A1-201ENST00000243253 DZIP1LQ8IYY4 767 aaKnown RBP15.21■□□□□ 0.03
SEC61A1-201ENST00000243253 SLKQ9H2G2 1235 aaPredicted RBP15.21■□□□□ 0.03
SEC61A1-201ENST00000243253 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
SEC61A1-201ENST00000243253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
SEC61A1-201ENST00000243253 FAM135BQ49AJ0 1406 aa15.21■□□□□ 0.02
SEC61A1-201ENST00000243253 ALKQ9UM73 1620 aa15.21■□□□□ 0.02
SEC61A1-201ENST00000243253 NEO1Q92859 1461 aa15.2■□□□□ 0.02
SEC61A1-201ENST00000243253 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
SEC61A1-201ENST00000243253 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
SEC61A1-201ENST00000243253 GGNBP2Q9H3C7 697 aa15.2■□□□□ 0.02
SEC61A1-201ENST00000243253 FYB1O15117 783 aa15.2■□□□□ 0.02
SEC61A1-201ENST00000243253 BECN1Q14457 450 aa15.2■□□□□ 0.02
SEC61A1-201ENST00000243253 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
SEC61A1-201ENST00000243253 YEATS2Q9ULM3 1422 aa15.18■□□□□ 0.02
SEC61A1-201ENST00000243253 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
SEC61A1-201ENST00000243253 CFAP53Q96M91 514 aa15.18■□□□□ 0.02
SEC61A1-201ENST00000243253 KIF2CQ99661 725 aa15.17■□□□□ 0.02
SEC61A1-201ENST00000243253 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
SEC61A1-201ENST00000243253 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
SEC61A1-201ENST00000243253 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
SEC61A1-201ENST00000243253 RBM25P49756 843 aaKnown RBP15.17■□□□□ 0.02
SEC61A1-201ENST00000243253 PRKCSHP14314 528 aaPredicted RBP15.16■□□□□ 0.02
SEC61A1-201ENST00000243253 DLC1Q96QB1 1528 aa15.16■□□□□ 0.02
SEC61A1-201ENST00000243253 MON2Q7Z3U7 1717 aa15.16■□□□□ 0.02
SEC61A1-201ENST00000243253 NOB1Q9ULX3 412 aaKnown RBP15.16■□□□□ 0.02
SEC61A1-201ENST00000243253 PTCH1Q13635 1447 aa15.16■□□□□ 0.02
SEC61A1-201ENST00000243253 NUCB1Q02818 461 aa15.16■□□□□ 0.02
SEC61A1-201ENST00000243253 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 IDI1Q13907 227 aa15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 TMEM57Q8N5G2 664 aa15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 C22orf23Q9BZE7 217 aa15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 RRAGDQ9NQL2 400 aaPredicted RBP15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
SEC61A1-201ENST00000243253 MCM4P33991 863 aa15.14■□□□□ 0.01
SEC61A1-201ENST00000243253 AKAP12Q02952 1782 aa15.14■□□□□ 0.01
SEC61A1-201ENST00000243253 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
SEC61A1-201ENST00000243253 XRCC6P12956 609 aaKnown RBP eCLIP15.13■□□□□ 0.01
SEC61A1-201ENST00000243253 ATAD2Q6PL18 1390 aa15.13■□□□□ 0.01
SEC61A1-201ENST00000243253 C3P01024 1663 aa15.13■□□□□ 0.01
SEC61A1-201ENST00000243253 ALDH1L2Q3SY69 923 aa15.12■□□□□ 0.01
SEC61A1-201ENST00000243253 NRKQ7Z2Y5 1582 aa15.12■□□□□ 0.01
SEC61A1-201ENST00000243253 FTSJ3Q8IY81 847 aaKnown RBP15.12■□□□□ 0.01
SEC61A1-201ENST00000243253 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
SEC61A1-201ENST00000243253 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
SEC61A1-201ENST00000243253 SNX21Q969T3 373 aa15.11■□□□□ 0.01
SEC61A1-201ENST00000243253 ATP7BP35670 1465 aa15.11■□□□□ 0.01
SEC61A1-201ENST00000243253 APBB1O00213 710 aa15.11■□□□□ 0.01
SEC61A1-201ENST00000243253 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
SEC61A1-201ENST00000243253 CPSF1Q10570 1443 aaKnown RBP15.1■□□□□ 0.01
SEC61A1-201ENST00000243253 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
SEC61A1-201ENST00000243253 ZNF853P0CG23 659 aa15.09■□□□□ 0.01
SEC61A1-201ENST00000243253 UPF2Q9HAU5 1272 aaKnown RBP15.09■□□□□ 0.01
SEC61A1-201ENST00000243253 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
SEC61A1-201ENST00000243253 HMOX1P09601 288 aa15.09■□□□□ 0.01
SEC61A1-201ENST00000243253 RIPK4P57078 832 aa15.08■□□□□ 0
SEC61A1-201ENST00000243253 KIF16BQ96L93 1317 aa15.08■□□□□ 0
SEC61A1-201ENST00000243253 THUMPD2Q9BTF0 503 aaKnown RBP15.07■□□□□ 0
SEC61A1-201ENST00000243253 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
SEC61A1-201ENST00000243253 ITPRIPQ8IWB1 547 aa15.07■□□□□ 0
SEC61A1-201ENST00000243253 SLC52A1Q9NWF4 448 aa15.07■□□□□ 0
SEC61A1-201ENST00000243253 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
SEC61A1-201ENST00000243253 CDK12Q9NYV4 1490 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms