RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 KIF3BO15066 747 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 SPC24Q8NBT2 197 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 RRBP1Q9P2E9 1410 aaKnown RBP9.76□□□□□ -0.85
APOB-201ENST00000233242 GIMAP7Q8NHV1 300 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 WDR63Q8IWG1 891 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 PRM3Q9NNZ6 103 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 MAGEC2Q9UBF1 373 aaPredicted RBP9.75□□□□□ -0.85
APOB-201ENST00000233242 CT47A1Q5JQC4 288 aaPredicted RBP9.75□□□□□ -0.85
APOB-201ENST00000233242 CFAP45Q9UL16 551 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 C1orf141Q5JVX7 400 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 EPS15P42566 896 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 TEFQ10587 303 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 FILIP1Q7Z7B0 1213 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 LRRCC1Q9C099 1032 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 ERC1Q8IUD2 1116 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 TRAK1Q9UPV9 953 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 CAVIN2O95810 425 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 SART3Q15020 963 aaKnown RBP9.75□□□□□ -0.85
APOB-201ENST00000233242 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
APOB-201ENST00000233242 UBTFL1P0CB47 393 aaPredicted RBP9.75□□□□□ -0.85
APOB-201ENST00000233242 STK38Q15208 465 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 CYP46A1Q9Y6A2 500 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 SERPINC1P01008 464 aa9.75□□□□□ -0.85
APOB-201ENST00000233242 ERCC6Q03468 1493 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 MSH5O43196 834 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 NOL10Q9BSC4 688 aaKnown RBP9.74□□□□□ -0.85
APOB-201ENST00000233242 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 TXLNAP40222 546 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 CLCN1P35523 988 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
APOB-201ENST00000233242 NUP62CLQ9H1M0 184 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 PDS5BQ9NTI5 1447 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 SMTNL1A8MU46 457 aa9.74□□□□□ -0.85
APOB-201ENST00000233242 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 STIM1Q13586 685 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 C11orf95C9JLR9 678 aaPredicted RBP9.73□□□□□ -0.85
APOB-201ENST00000233242 SFPQP23246 707 aaKnown RBP eCLIP9.73□□□□□ -0.85
APOB-201ENST00000233242 MICALCLQ6ZW33 695 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
APOB-201ENST00000233242 ANKRD18AQ8IVF6 992 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 PTPN14Q15678 1187 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 MAP3K11Q16584 847 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 CCDC183Q5T5S1 534 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 ZSCAN12O43309 604 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.85
APOB-201ENST00000233242 DYDC1Q8WWB3 177 aa9.73□□□□□ -0.85
APOB-201ENST00000233242 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
APOB-201ENST00000233242 TCP11L2Q8N4U5 519 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 FYCO1Q9BQS8 1478 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 TCEAL9Q9UHQ7 104 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 ODF2Q5BJF6 829 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 CCDC27Q2M243 656 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 ERICH4A6NGS2 130 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 TIGD1Q96MW7 591 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 DHX29Q7Z478 1369 aaKnown RBP9.72□□□□□ -0.85
APOB-201ENST00000233242 EID1Q9Y6B2 187 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 WIZO95785 1651 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 LRRC9Q6ZRR7 1453 aa9.72□□□□□ -0.85
APOB-201ENST00000233242 PPP2R1AP30153 589 aa9.71□□□□□ -0.85
APOB-201ENST00000233242 HS1BP3Q53T59 392 aa9.71□□□□□ -0.85
APOB-201ENST00000233242 GTPBP4Q9BZE4 634 aaKnown RBP9.71□□□□□ -0.85
APOB-201ENST00000233242 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.85
APOB-201ENST00000233242 CRACR2AQ9BSW2 395 aa9.71□□□□□ -0.85
APOB-201ENST00000233242 TTC5Q8N0Z6 440 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 SPATA32Q96LK8 384 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 FSD1Q9BTV5 496 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 KIF21BO75037 1637 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 SCAND2PQ9GZW5 306 aaPredicted RBP9.71□□□□□ -0.86
APOB-201ENST00000233242 EZRP15311 586 aaKnown RBP9.71□□□□□ -0.86
APOB-201ENST00000233242 ME1P48163 572 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 CCDC181Q5TID7 509 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 UPF3BQ9BZI7 483 aaKnown RBP9.71□□□□□ -0.86
APOB-201ENST00000233242 CHD1LQ86WJ1 897 aa9.71□□□□□ -0.86
APOB-201ENST00000233242 GSDMDP57764 484 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 LARP1BQ659C4 914 aaKnown RBP9.7□□□□□ -0.86
APOB-201ENST00000233242 UVSSAQ2YD98 709 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 CTAGE5O15320 804 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 CCDC148Q8NFR7 591 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 CCT4P50991 539 aaKnown RBP9.7□□□□□ -0.86
APOB-201ENST00000233242 SYCE3A1L190 88 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 ARHGAP29Q52LW3 1261 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 DNAJC2Q99543 621 aaKnown RBP9.7□□□□□ -0.86
APOB-201ENST00000233242 GNAI2P04899 355 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 KRT32Q14532 448 aa9.7□□□□□ -0.86
APOB-201ENST00000233242 TSPYL4Q9UJ04 414 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 HFM1A2PYH4 1435 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
APOB-201ENST00000233242 ATF7IPQ6VMQ6 1270 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 CTR9Q6PD62 1173 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 TTLL5Q6EMB2 1281 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms