RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 BCAR3O75815 825 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 RNF20Q5VTR2 975 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 PRAM1Q96QH2 718 aa14.03□□□□□ -0.16
NOD1-201ENST00000222823 COL17A1Q9UMD9 1497 aaPredicted RBP14.03□□□□□ -0.16
NOD1-201ENST00000222823 ATF3P18847 181 aa14.03□□□□□ -0.16
NOD1-201ENST00000222823 FANCAO15360 1455 aa14.03□□□□□ -0.16
NOD1-201ENST00000222823 ABCA8O94911 1581 aa14.03□□□□□ -0.16
NOD1-201ENST00000222823 GOLGA6L19H0YKK7 550 aa14.02□□□□□ -0.16
NOD1-201ENST00000222823 TXNDC2Q86VQ3 553 aa14.02□□□□□ -0.16
NOD1-201ENST00000222823 WDR63Q8IWG1 891 aa14.02□□□□□ -0.16
NOD1-201ENST00000222823 APPP05067 770 aa14.02□□□□□ -0.16
NOD1-201ENST00000222823 EXOSC9Q06265 439 aaKnown RBP14.02□□□□□ -0.17
NOD1-201ENST00000222823 DUSP27Q5VZP5 1158 aa14.02□□□□□ -0.17
NOD1-201ENST00000222823 A2MP01023 1474 aa14.02□□□□□ -0.17
NOD1-201ENST00000222823 ADGRF5Q8IZF2 1346 aa14.02□□□□□ -0.17
NOD1-201ENST00000222823 CPLX1O14810 134 aa14.02□□□□□ -0.17
NOD1-201ENST00000222823 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
NOD1-201ENST00000222823 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
NOD1-201ENST00000222823 RNF123Q5XPI4 1314 aa14.01□□□□□ -0.17
NOD1-201ENST00000222823 UBTFL1P0CB47 393 aaPredicted RBP14.01□□□□□ -0.17
NOD1-201ENST00000222823 ERC2O15083 957 aa14.01□□□□□ -0.17
NOD1-201ENST00000222823 AIMP1Q12904 312 aaKnown RBP14.01□□□□□ -0.17
NOD1-201ENST00000222823 RIC3Q7Z5B4 369 aa14.01□□□□□ -0.17
NOD1-201ENST00000222823 SLC52A1Q9NWF4 448 aa14.01□□□□□ -0.17
NOD1-201ENST00000222823 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
NOD1-201ENST00000222823 NSD3Q9BZ95 1437 aa14.01□□□□□ -0.17
NOD1-201ENST00000222823 ABCC2Q92887 1545 aa14□□□□□ -0.17
NOD1-201ENST00000222823 MBD5Q9P267 1494 aa14□□□□□ -0.17
NOD1-201ENST00000222823 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
NOD1-201ENST00000222823 LRRIQ1Q96JM4 1722 aa14□□□□□ -0.17
NOD1-201ENST00000222823 TRDNQ13061 729 aa14□□□□□ -0.17
NOD1-201ENST00000222823 ABTB2Q8N961 1025 aa14□□□□□ -0.17
NOD1-201ENST00000222823 KDM5CP41229 1560 aa14□□□□□ -0.17
NOD1-201ENST00000222823 NUCB2P80303 420 aa14□□□□□ -0.17
NOD1-201ENST00000222823 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 NKTRP30414 1462 aaKnown RBP13.99□□□□□ -0.17
NOD1-201ENST00000222823 TPM3P06753 285 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 GNAI3P08754 354 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 ASXL1Q8IXJ9 1541 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 KDM5BQ9UGL1 1544 aa13.99□□□□□ -0.17
NOD1-201ENST00000222823 PES1O00541 588 aaKnown RBP13.98□□□□□ -0.17
NOD1-201ENST00000222823 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
NOD1-201ENST00000222823 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
NOD1-201ENST00000222823 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
NOD1-201ENST00000222823 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
NOD1-201ENST00000222823 CDC45O75419 566 aa13.98□□□□□ -0.17
NOD1-201ENST00000222823 TRIM29Q14134 588 aa13.98□□□□□ -0.17
NOD1-201ENST00000222823 VPS53Q5VIR6 699 aa13.98□□□□□ -0.17
NOD1-201ENST00000222823 SMC3Q9UQE7 1217 aa13.98□□□□□ -0.17
NOD1-201ENST00000222823 CT47B1P0C2W7 299 aaPredicted RBP13.97□□□□□ -0.17
NOD1-201ENST00000222823 TPD52L1Q16890 204 aaPredicted RBP13.97□□□□□ -0.17
NOD1-201ENST00000222823 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
NOD1-201ENST00000222823 NOC3LQ8WTT2 800 aaKnown RBP13.97□□□□□ -0.17
NOD1-201ENST00000222823 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
NOD1-201ENST00000222823 CABP1Q9NZU7 370 aa13.97□□□□□ -0.17
NOD1-201ENST00000222823 VPS37DQ86XT2 251 aa13.97□□□□□ -0.17
NOD1-201ENST00000222823 CLASRPQ8N2M8 674 aaKnown RBP13.97□□□□□ -0.17
NOD1-201ENST00000222823 INSRP06213 1382 aa13.97□□□□□ -0.17
NOD1-201ENST00000222823 CCDC30Q5VVM6 783 aa13.96□□□□□ -0.17
NOD1-201ENST00000222823 SURF6O75683 361 aaKnown RBP13.96□□□□□ -0.17
NOD1-201ENST00000222823 BICD2Q8TD16 824 aa13.96□□□□□ -0.17
NOD1-201ENST00000222823 TSR2Q969E8 191 aaKnown RBP13.96□□□□□ -0.17
NOD1-201ENST00000222823 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.17
NOD1-201ENST00000222823 NFKBIBQ15653 356 aa13.96□□□□□ -0.18
NOD1-201ENST00000222823 MAST1Q9Y2H9 1570 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 ADCY10Q96PN6 1610 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 AMOTL1Q8IY63 956 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 CDK19Q9BWU1 502 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
NOD1-201ENST00000222823 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
NOD1-201ENST00000222823 ESCO1Q5FWF5 840 aa13.94□□□□□ -0.18
NOD1-201ENST00000222823 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
NOD1-201ENST00000222823 NOS1P29475 1434 aa13.94□□□□□ -0.18
NOD1-201ENST00000222823 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
NOD1-201ENST00000222823 ATAD2Q6PL18 1390 aa13.94□□□□□ -0.18
NOD1-201ENST00000222823 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
NOD1-201ENST00000222823 C14orf93Q9H972 538 aaKnown RBP13.94□□□□□ -0.18
NOD1-201ENST00000222823 PIK3C2GO75747 1445 aa13.93□□□□□ -0.18
NOD1-201ENST00000222823 PLEKHO1Q53GL0 409 aaPredicted RBP13.93□□□□□ -0.18
NOD1-201ENST00000222823 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
NOD1-201ENST00000222823 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
NOD1-201ENST00000222823 RALYLQ86SE5 291 aaKnown RBP13.92□□□□□ -0.18
NOD1-201ENST00000222823 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
NOD1-201ENST00000222823 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
NOD1-201ENST00000222823 WASHC4Q2M389 1173 aa13.92□□□□□ -0.18
NOD1-201ENST00000222823 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
NOD1-201ENST00000222823 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
NOD1-201ENST00000222823 TPM1P09493 284 aa13.91□□□□□ -0.18
NOD1-201ENST00000222823 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
NOD1-201ENST00000222823 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
NOD1-201ENST00000222823 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
NOD1-201ENST00000222823 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
NOD1-201ENST00000222823 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
NOD1-201ENST00000222823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.18
NOD1-201ENST00000222823 CNTROBQ8N137 903 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms