RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 CCDC27Q2M243 656 aa10.39□□□□□ -0.75
HMGXB4-201ENST00000216106 EDC4Q6P2E9 1401 aaKnown RBP10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 WDR63Q8IWG1 891 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 PLEKHG1Q9ULL1 1385 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 CDC42BPGQ6DT37 1551 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 DIAPH1O60610 1272 aaKnown RBP10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 PLEKHF1Q96S99 279 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 ITSN1Q15811 1721 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 MON2Q7Z3U7 1717 aa10.38□□□□□ -0.75
HMGXB4-201ENST00000216106 PNPLA6Q8IY17 1366 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 MSH5O43196 834 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 NME9Q86XW9 330 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 SIRT1Q96EB6 747 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 CCDC61Q9Y6R9 512 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 MAPK8IP3Q9UPT6 1336 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 SKAP1Q86WV1 359 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 AKAP12Q02952 1782 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 POLKQ9UBT6 870 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 ZRANB1Q9UGI0 708 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 PRR36Q9H6K5 1346 aa10.37□□□□□ -0.75
HMGXB4-201ENST00000216106 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
HMGXB4-201ENST00000216106 EID1Q9Y6B2 187 aa10.36□□□□□ -0.75
HMGXB4-201ENST00000216106 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
HMGXB4-201ENST00000216106 TMPOP42166 694 aaKnown RBP10.36□□□□□ -0.75
HMGXB4-201ENST00000216106 LRRC7Q96NW7 1537 aa10.36□□□□□ -0.75
HMGXB4-201ENST00000216106 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 PTPRUQ92729 1446 aa10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 SLIT1O75093 1534 aa10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 MYH16Q9H6N6 1097 aa10.35□□□□□ -0.75
HMGXB4-201ENST00000216106 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
HMGXB4-201ENST00000216106 TRIM35Q9UPQ4 493 aa10.34□□□□□ -0.75
HMGXB4-201ENST00000216106 NCBP3Q53F19 620 aaKnown RBP10.34□□□□□ -0.75
HMGXB4-201ENST00000216106 ARHGAP23Q9P227 1491 aa10.34□□□□□ -0.75
HMGXB4-201ENST00000216106 PANK1Q8TE04 598 aa10.34□□□□□ -0.75
HMGXB4-201ENST00000216106 TOPAZ1Q8N9V7 1692 aa10.33□□□□□ -0.76
HMGXB4-201ENST00000216106 COG3Q96JB2 828 aa10.33□□□□□ -0.76
HMGXB4-201ENST00000216106 RIPK4P57078 832 aa10.33□□□□□ -0.76
HMGXB4-201ENST00000216106 RRS1Q15050 365 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-201ENST00000216106 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
HMGXB4-201ENST00000216106 HMOX1P09601 288 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 PRKAR2BP31323 418 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 PDE3AQ14432 1141 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 RSPH6AQ9H0K4 717 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 NRKQ7Z2Y5 1582 aa10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-201ENST00000216106 FCHSD2O94868 740 aa10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 ACEP12821 1306 aa10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 THEMISQ8N1K5 641 aaPredicted RBP10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 TNNQ9UQP3 1299 aa10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 AATKQ6ZMQ8 1374 aa10.31□□□□□ -0.76
HMGXB4-201ENST00000216106 MS4A1P11836 297 aa10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 PDE4AP27815 886 aa10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 EXOSC9Q06265 439 aaKnown RBP10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 NEFMP07197 916 aa10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 RLBP1P12271 317 aa10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 IL13P35225 146 aa10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 TBX22Q9Y458 520 aa10.3□□□□□ -0.76
HMGXB4-201ENST00000216106 RGPD8O14715 1765 aaPredicted RBP10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 CLUAP1Q96AJ1 413 aa10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 PHACTR3Q96KR7 559 aa10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 PTCH1Q13635 1447 aa10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 RIMS1Q86UR5 1692 aaKnown RBP10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 TTC21BQ7Z4L5 1316 aa10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 USP6P35125 1406 aa10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 CEP170BQ9Y4F5 1589 aaPredicted RBP10.29□□□□□ -0.76
HMGXB4-201ENST00000216106 ANP32AP39687 249 aaKnown RBP10.28□□□□□ -0.76
HMGXB4-201ENST00000216106 BACH2Q9BYV9 841 aa10.28□□□□□ -0.76
HMGXB4-201ENST00000216106 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
HMGXB4-201ENST00000216106 PMFBP1Q8TBY8 1022 aa10.28□□□□□ -0.76
HMGXB4-201ENST00000216106 IL16Q14005 1332 aa10.28□□□□□ -0.76
HMGXB4-201ENST00000216106 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
HMGXB4-201ENST00000216106 XRN1Q8IZH2 1706 aaKnown RBP10.27□□□□□ -0.76
HMGXB4-201ENST00000216106 IGHDP01880 384 aa10.27□□□□□ -0.76
HMGXB4-201ENST00000216106 OVOS2A0A0J9YW53 1432 aa10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 OVOS2Q6IE36 1432 aa10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 SMC4Q9NTJ3 1288 aa10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 DLG5Q8TDM6 1919 aa10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 SOX12O15370 315 aa10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 CT47B1P0C2W7 299 aaPredicted RBP10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 THUMPD2Q9BTF0 503 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-201ENST00000216106 RGS3P49796 1198 aa10.26□□□□□ -0.77
HMGXB4-201ENST00000216106 NFE2L2Q16236 605 aa10.26□□□□□ -0.77
HMGXB4-201ENST00000216106 LAS1LQ9Y4W2 734 aaKnown RBP10.26□□□□□ -0.77
HMGXB4-201ENST00000216106 NALCNQ8IZF0 1738 aa10.26□□□□□ -0.77
HMGXB4-201ENST00000216106 SSH1Q8WYL5 1049 aa10.26□□□□□ -0.77
HMGXB4-201ENST00000216106 KCNA6P17658 529 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms