RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Trim28Q62318 834 aa20.28■□□□□ 0.84
Ldb3-208ENSMUST00000228044 Tsen2Q6P7W5 460 aa20.28■□□□□ 0.84
Ldb3-208ENSMUST00000228044 Brwd3A2AHJ4 1799 aa20.28■□□□□ 0.84
Ldb3-208ENSMUST00000228044 Calr4Q3TQS0 420 aa20.27■□□□□ 0.84
Ldb3-208ENSMUST00000228044 Astn2Q80Z10 1352 aa20.27■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Erbb3Q61526 1339 aa20.26■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Pik3c2aQ61194 1686 aa20.25■□□□□ 0.83
Ldb3-208ENSMUST00000228044 U2af1Q9D883 239 aaKnown RBP20.25■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Hoxb7P09024 217 aa20.24■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Speer4f1Q9D5Q6 258 aa20.24■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Mdc1Q5PSV9 1707 aa20.24■□□□□ 0.83
Ldb3-208ENSMUST00000228044 NgefQ8CHT1 710 aa20.23■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Scn4aQ9ER60 1841 aa20.23■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Birc3O08863 600 aa20.22■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Sipa1l2Q80TE4 1722 aa20.22■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Ttc41Q692V3 1318 aa20.22■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Sox12Q04890 314 aa20.22■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Col16a1Q8BLX7 1580 aa20.21■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Upf2A2AT37 1269 aaKnown RBP20.21■□□□□ 0.83
Ldb3-208ENSMUST00000228044 Ralbp1Q62172 648 aa20.2■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Ubr1O70481 1757 aa20.2■□□□□ 0.82
Ldb3-208ENSMUST00000228044 CemipQ8BI06 1361 aa20.2■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Ppp1r15aP17564 657 aa20.2■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Ap3b2Q9JME5 1082 aa20.2■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Znf541Q0GGX2 1363 aa20.19■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Slc12a5Q91V14 1138 aa20.19■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Cdk12Q14AX6 1484 aaKnown RBP20.18■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Ccdc30Q8BVF4 654 aa20.18■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Scn7aB1AYL1 1681 aa20.18■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Tcerg1Q8CGF7 1100 aaKnown RBP20.17■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Uhrf1bp1lA2RSJ4 1457 aa20.17■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Neurod2Q62414 383 aa20.16■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Ncbp3Q8BZR9 615 aaKnown RBP20.16■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Map2P20357 1828 aa20.16■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Fam135bQ9DAI6 1403 aa20.16■□□□□ 0.82
Ldb3-208ENSMUST00000228044 SafbD3YXK2 937 aaKnown RBP20.16■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Apaf1O88879 1249 aa20.16■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Tmem2Q5FWI3 1383 aa20.15■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Plekhh1Q80TI1 1356 aa20.15■□□□□ 0.82
Ldb3-208ENSMUST00000228044 Col18a1P39061 1774 aa20.14■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Spef2Q8C9J3 1734 aa20.13■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Frmpd2A0A140LI67 1392 aa20.13■□□□□ 0.81
Ldb3-208ENSMUST00000228044 PalmQ9Z0P4 383 aa20.12■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Fchsd2Q3USJ8 740 aa20.11■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Camta1A2A891 1682 aa20.11■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Ltbp4Q8K4G1 1666 aa20.11■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Aplp2Q06335 707 aa20.11■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Rsph6aQ8CDR2 708 aa20.11■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Mapk8ip3Q9ESN9 1337 aa20.1■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Slain2Q8CI08 581 aa20.1■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Rapgef3Q8VCC8 918 aa20.1■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Uhrf1bp1B2KF50 1429 aa20.1■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Dennd6aQ8BH65 605 aa20.09■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Ciz1Q8VEH2 845 aa20.09■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Wnk3Q80XP9 1757 aa20.08■□□□□ 0.81
Ldb3-208ENSMUST00000228044 Nlgn1Q99K10 843 aa20.07■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Atxn3Q9CVD2 355 aa20.07■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Cavin4A2AMM0 362 aa20.07■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Q4VA45 678 aa20.07■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Dusp27Q148W8 1138 aa20.06■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Slc35g1Q8BY79 368 aa20.06■□□□□ 0.8
Ldb3-208ENSMUST00000228044 FancaQ9JL70 1439 aa20.05■□□□□ 0.8
Ldb3-208ENSMUST00000228044 PtprvP70289 1705 aa20.05■□□□□ 0.8
Ldb3-208ENSMUST00000228044 PaskQ8CEE6 1383 aa20.05■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Eif4a2P10630 407 aa20.04■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Gas2l2Q5SSG4 860 aa20.04■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Gm21190A0A0G2JGJ6 266 aa20.03■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Scaf1Q5U4C3 1256 aaKnown RBP20.03■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Evi5lH3BKQ3 813 aa20.02■□□□□ 0.8
Ldb3-208ENSMUST00000228044 Wdr17E9Q271 1322 aa20.01■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Nckap5lQ6GQX2 1323 aa20.01■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Atp7bQ64446 1462 aa20.01■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Cabp4Q8VHC5 271 aa20.01■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Rwdd1Q9CQK7 243 aa20.01■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Parp14Q2EMV9 1817 aa20.01■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Pip4k2bQ80XI4 416 aa20■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Ncapd2Q8K2Z4 1392 aa19.99■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Gm38655A0A286YDK6 273 aa19.99■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Rad17Q6NXW6 688 aa19.99■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Robo1O89026 1612 aa19.98■□□□□ 0.79
Ldb3-208ENSMUST00000228044 1700123L14RikQ3V2K7 440 aa19.98■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Kcna6Q61923 529 aa19.98■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Ano8Q6PB70 1060 aa19.98■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Fyb1O35601 819 aa19.97■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Swt1Q9DBQ9 907 aa19.97■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Ncoa4Q5U4H9 625 aa19.96■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Nfat5Q9WV30 1534 aa19.96■□□□□ 0.79
Ldb3-208ENSMUST00000228044 TimelessQ9R1X4 1197 aa19.96■□□□□ 0.79
Ldb3-208ENSMUST00000228044 Mcm10Q0VBD2 885 aa19.95■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Slit2Q9R1B9 1521 aa19.95■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Ptpn23Q6PB44 1692 aa19.95■□□□□ 0.78
Ldb3-208ENSMUST00000228044 MpripP97434 1024 aa19.94■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Gimap6Q8K349 305 aa19.94■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Siglec1Q62230 1695 aa19.94■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Ttc21aQ8C0S4 1314 aa19.94■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Ksr2Q3UVC0 959 aa19.94■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Farp2Q91VS8 1065 aa19.94■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Zfp777B9EKF4 885 aa19.92■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Atf3Q60765 181 aa19.92■□□□□ 0.78
Ldb3-208ENSMUST00000228044 Amigo3Q8C2S7 508 aa19.92■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 122.4 ms