RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 CrbnQ8C7D2 445 aa20.64■□□□□ 0.9
Ubp1-206ENSMUST00000216558 Idi1P58044 227 aa20.64■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Mdc1Q5PSV9 1707 aa20.63■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Tsen2Q6P7W5 460 aa20.63■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Rad21Q61550 635 aaKnown RBP20.62■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Ncbp3Q8BZR9 615 aaKnown RBP20.62■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Ttc41Q692V3 1318 aa20.62■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Upf2A2AT37 1269 aaKnown RBP20.61■□□□□ 0.89
Ubp1-206ENSMUST00000216558 CemipQ8BI06 1361 aa20.6■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Znf541Q0GGX2 1363 aa20.59■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Calr4Q3TQS0 420 aa20.59■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Pik3c2aQ61194 1686 aa20.59■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Ppp1r15aP17564 657 aa20.58■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Ralbp1Q62172 648 aa20.58■□□□□ 0.89
Ubp1-206ENSMUST00000216558 U2af1Q9D883 239 aaKnown RBP20.58■□□□□ 0.89
Ubp1-206ENSMUST00000216558 Col16a1Q8BLX7 1580 aa20.57■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Speer4f1Q9D5Q6 258 aa20.57■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Sipa1l2Q80TE4 1722 aa20.57■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Fam135bQ9DAI6 1403 aa20.57■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Erbb3Q61526 1339 aa20.57■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Ap3b2Q9JME5 1082 aa20.56■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Cdk12Q14AX6 1484 aaKnown RBP20.56■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Scn4aQ9ER60 1841 aa20.54■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Ubr1O70481 1757 aa20.54■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Birc3O08863 600 aa20.54■□□□□ 0.88
Ubp1-206ENSMUST00000216558 NgefQ8CHT1 710 aa20.54■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Slc12a5Q91V14 1138 aa20.54■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Scaf1Q5U4C3 1256 aaKnown RBP20.53■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Tmem2Q5FWI3 1383 aa20.52■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Col18a1P39061 1774 aa20.52■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Sox12Q04890 314 aa20.52■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Fchsd2Q3USJ8 740 aa20.52■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Ccdc30Q8BVF4 654 aa20.52■□□□□ 0.88
Ubp1-206ENSMUST00000216558 Ciz1Q8VEH2 845 aa20.51■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Scn7aB1AYL1 1681 aa20.51■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Camta1A2A891 1682 aa20.5■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Map2P20357 1828 aa20.5■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Apaf1O88879 1249 aa20.49■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Rapgef3Q8VCC8 918 aa20.49■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Spef2Q8C9J3 1734 aa20.49■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Plekhh1Q80TI1 1356 aa20.49■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Uhrf1bp1lA2RSJ4 1457 aa20.48■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Frmpd2A0A140LI67 1392 aa20.48■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Slain2Q8CI08 581 aa20.47■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Uhrf1bp1B2KF50 1429 aa20.46■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Neurod2Q62414 383 aa20.46■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Rsph6aQ8CDR2 708 aa20.46■□□□□ 0.87
Ubp1-206ENSMUST00000216558 PalmQ9Z0P4 383 aa20.46■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Ltbp4Q8K4G1 1666 aa20.46■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Wnk3Q80XP9 1757 aa20.46■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Tcerg1Q8CGF7 1100 aaKnown RBP20.45■□□□□ 0.87
Ubp1-206ENSMUST00000216558 Dennd6aQ8BH65 605 aa20.45■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Mapk8ip3Q9ESN9 1337 aa20.45■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Aplp2Q06335 707 aa20.44■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Nlgn1Q99K10 843 aa20.44■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Cavin4A2AMM0 362 aa20.43■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Q4VA45 678 aa20.43■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Rad17Q6NXW6 688 aa20.43■□□□□ 0.86
Ubp1-206ENSMUST00000216558 PaskQ8CEE6 1383 aa20.43■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Dusp27Q148W8 1138 aa20.41■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Ano8Q6PB70 1060 aa20.4■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Slc35g1Q8BY79 368 aa20.4■□□□□ 0.86
Ubp1-206ENSMUST00000216558 SafbD3YXK2 937 aaKnown RBP20.39■□□□□ 0.86
Ubp1-206ENSMUST00000216558 Eif4a2P10630 407 aa20.38■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Atxn3Q9CVD2 355 aa20.38■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Wdr17E9Q271 1322 aa20.38■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Gm21190A0A0G2JGJ6 266 aa20.38■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Zfp777B9EKF4 885 aa20.38■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Ncoa4Q5U4H9 625 aa20.38■□□□□ 0.85
Ubp1-206ENSMUST00000216558 FancaQ9JL70 1439 aa20.37■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Ncapd2Q8K2Z4 1392 aa20.37■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Kcna6Q61923 529 aa20.37■□□□□ 0.85
Ubp1-206ENSMUST00000216558 PtprvP70289 1705 aa20.37■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Gimap6Q8K349 305 aa20.36■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Rwdd1Q9CQK7 243 aa20.36■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Atp7bQ64446 1462 aa20.35■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Evi5lH3BKQ3 813 aa20.35■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Cabp4Q8VHC5 271 aa20.35■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Swt1Q9DBQ9 907 aa20.35■□□□□ 0.85
Ubp1-206ENSMUST00000216558 TimelessQ9R1X4 1197 aa20.35■□□□□ 0.85
Ubp1-206ENSMUST00000216558 Fyb1O35601 819 aa20.33■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Nckap5lQ6GQX2 1323 aa20.32■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Gas2l2Q5SSG4 860 aa20.32■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Pip4k2bQ80XI4 416 aa20.32■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Parp14Q2EMV9 1817 aa20.32■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Slit2Q9R1B9 1521 aa20.32■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Robo1O89026 1612 aa20.32■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Farp2Q91VS8 1065 aa20.31■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Nfat5Q9WV30 1534 aa20.31■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Ptpn23Q6PB44 1692 aa20.31■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Atf3Q60765 181 aa20.3■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Ttc21aQ8C0S4 1314 aa20.29■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Iqcf3Q9D498 203 aa20.29■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Mbd3Q9Z2D8 285 aaKnown RBP20.29■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Siglec1Q62230 1695 aa20.28■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Hoxc9P09633 260 aa20.27■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Ksr2Q3UVC0 959 aa20.27■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Amigo3Q8C2S7 508 aa20.27■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Ankrd50F7BE84 1390 aa20.27■□□□□ 0.84
Ubp1-206ENSMUST00000216558 Ccar1Q8CH18 1146 aaKnown RBP20.27■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms