RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Crybg2B7ZCC2 1516 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Tmc1Q8R4P5 757 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Pip4k2aO70172 405 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 PdcQ9QW08 244 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Atp2b2Q9R0K7 1198 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gimap6Q8K349 305 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gnai2P08752 355 aaKnown RBP14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Q9D9H8 365 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Slc13a4Q8BZ82 625 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 SkilQ60665 675 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 ArsiQ32KI9 573 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nek4Q9Z1J2 792 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Plekhh1Q80TI1 1356 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Sugp2Q8CH09 1067 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Pank1Q8K4K6 548 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Zkscan2G3X952 960 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Dennd6aQ8BH65 605 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Themis2Q91YX0 663 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Speer4bQ9D9F7 267 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 PsapQ61207 557 aaKnown RBP14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nol7Q9D7Z3 254 aaKnown RBP14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Mcm2P97310 904 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Trim34aQ99PP6 485 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Ripk4Q9ERK0 786 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Lrrfip2Q91WK0 415 aa14.84□□□□□ -0.03
Col6a3-208ENSMUST00000188587 IbspQ61711 324 aa14.84□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Washc2Q6PGL7 1334 aa14.84□□□□□ -0.03
Col6a3-208ENSMUST00000188587 NefhP19246 1090 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Kif20aP97329 887 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Pde4bB1AWC9 736 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gtf3c3Q3TMP1 882 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nol8Q3UHX0 1147 aaKnown RBP14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Ccdc141E9Q8Q6 1531 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cyp26c1B2RXA7 518 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cdkn1cP49919 348 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Fkbp4P30416 458 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 MpripP97434 1024 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Atad2bE9Q166 1460 aaKnown RBP14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Nolc1E9Q5C9 702 aaKnown RBP14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Wdhd1P59328 1117 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Egfem1Q8C088 590 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Znf710Q3U288 666 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Stk38Q91VJ4 465 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ankrd36D3Z4K0 1415 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Flad1Q8R123 492 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm21663A0A0G2JE01 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm7361D3Z6R1 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 5031410I06RikE9Q4E0 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm1979E9QAN3 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm5862K7N5V5 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm10220K7N660 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ppm1eQ80TL0 749 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ssr1Q9CY50 286 aaKnown RBP14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ttc19Q8CC21 365 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Jph4Q80WT0 628 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ercc6lQ8BHK9 1240 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Tango6Q8C3S2 1079 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Puf60Q3UEB3 564 aaKnown RBP14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cavin4A2AMM0 362 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Prpf4bQ61136 1007 aaKnown RBP14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Golim4Q8BXA1 655 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cecr2E9Q2Z1 1453 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Hs1bp3Q3TC93 395 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Rapgef4Q9EQZ6 1011 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Abcd1P48410 736 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 TkfcQ8VC30 578 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Larp1Q6ZQ58 1072 aaKnown RBP14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 GlmnQ8BZM1 596 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Dhx8A2A4P0 1244 aaKnown RBP14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gsdma2Q32M21 443 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Tmco3Q8BH01 678 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Q9D9S1 216 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cep131Q62036 1060 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Tubb6Q922F4 447 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Zscan20B2KFW1 1030 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cdkl5Q3UTQ8 938 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Bag1Q60739 355 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Rnf214Q8BFU3 668 aaKnown RBP14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 ZgpatQ8VDM1 511 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Zeb2Q9R0G7 1215 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Rpgrip1lQ8CG73 1264 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Krt84Q99M73 603 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Arhgef18Q6P9R4 1021 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Galntl5Q9D4M9 431 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Vps37dQ810I0 261 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Hmgb2P30681 210 aaKnown RBP14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Babam1Q3UI43 333 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Nup133Q8R0G9 1155 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm21680A0A0G2JGR8 267 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Phldb2Q8K1N2 1249 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ccdc178Q8CDV0 866 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Mipol1Q9D9F8 279 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Btbd11Q6GQW0 1109 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Cfap69Q8BH53 942 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Riok1Q922Q2 567 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Rhot2Q8JZN7 620 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Nphp1Q9QY53 687 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Ccar2Q8VDP4 922 aaKnown RBP14.76□□□□□ -0.05
Col6a3-208ENSMUST00000188587 TnmdQ9EP64 317 aa14.76□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Srgap3Q812A2 1099 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms