RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Cdk19Q8BWD8 501 aa22.42■■□□□ 1.18
Msh3-205ENSMUST00000187424 Cadps2Q8BYR5 1297 aa22.41■■□□□ 1.18
Msh3-205ENSMUST00000187424 Tnrc6bQ8BKI2 1810 aaKnown RBP22.4■■□□□ 1.18
Msh3-205ENSMUST00000187424 Col16a1Q8BLX7 1580 aa22.39■■□□□ 1.18
Msh3-205ENSMUST00000187424 Psrc1Q9D0P7 329 aa22.39■■□□□ 1.17
Msh3-205ENSMUST00000187424 Nfat5Q9WV30 1534 aa22.39■■□□□ 1.17
Msh3-205ENSMUST00000187424 Adamtsl1Q8BLI0 1745 aa22.39■■□□□ 1.17
Msh3-205ENSMUST00000187424 Wdr17E9Q271 1322 aa22.38■■□□□ 1.17
Msh3-205ENSMUST00000187424 Sgsm1Q8BPQ7 1093 aa22.38■■□□□ 1.17
Msh3-205ENSMUST00000187424 Sirt1Q923E4 737 aa22.38■■□□□ 1.17
Msh3-205ENSMUST00000187424 Cacna1sQ02789 1880 aa22.38■■□□□ 1.17
Msh3-205ENSMUST00000187424 Mon2Q80TL7 1715 aa22.36■■□□□ 1.17
Msh3-205ENSMUST00000187424 InsrP15208 1372 aa22.35■■□□□ 1.17
Msh3-205ENSMUST00000187424 Bcl9lQ67FY2 1494 aa22.34■■□□□ 1.17
Msh3-205ENSMUST00000187424 Sox12Q04890 314 aa22.34■■□□□ 1.17
Msh3-205ENSMUST00000187424 Sin3aQ60520 1274 aaKnown RBP22.34■■□□□ 1.17
Msh3-205ENSMUST00000187424 Znf316Q6PGE4 1016 aa22.33■■□□□ 1.17
Msh3-205ENSMUST00000187424 Nup153E9Q3G8 1462 aaKnown RBP22.32■■□□□ 1.16
Msh3-205ENSMUST00000187424 Fer1l6E0CZ42 1862 aa22.32■■□□□ 1.16
Msh3-205ENSMUST00000187424 Gsto1O09131 240 aa22.31■■□□□ 1.16
Msh3-205ENSMUST00000187424 Cdhr2E9Q7P9 1308 aa22.31■■□□□ 1.16
Msh3-205ENSMUST00000187424 Las1lA2BE28 776 aaKnown RBP22.3■■□□□ 1.16
Msh3-205ENSMUST00000187424 Tet3Q8BG87 1668 aa22.3■■□□□ 1.16
Msh3-205ENSMUST00000187424 NgefQ8CHT1 710 aa22.27■■□□□ 1.16
Msh3-205ENSMUST00000187424 Slc35g1Q8BY79 368 aa22.26■■□□□ 1.15
Msh3-205ENSMUST00000187424 Map3k19E9Q3S4 1311 aa22.26■■□□□ 1.15
Msh3-205ENSMUST00000187424 Zmym3Q9JLM4 1370 aa22.25■■□□□ 1.15
Msh3-205ENSMUST00000187424 Cwc22Q8C5N3 908 aaKnown RBP22.25■■□□□ 1.15
Msh3-205ENSMUST00000187424 Mast2Q60592 1734 aa22.25■■□□□ 1.15
Msh3-205ENSMUST00000187424 Dixdc1Q80Y83 711 aa22.24■■□□□ 1.15
Msh3-205ENSMUST00000187424 Idi2Q8BFZ6 227 aa22.24■■□□□ 1.15
Msh3-205ENSMUST00000187424 Exosc9Q9JHI7 438 aaKnown RBP22.24■■□□□ 1.15
Msh3-205ENSMUST00000187424 Ap3b2Q9JME5 1082 aa22.24■■□□□ 1.15
Msh3-205ENSMUST00000187424 FanciQ8K368 1330 aa22.24■■□□□ 1.15
Msh3-205ENSMUST00000187424 Ncapd2Q8K2Z4 1392 aa22.22■■□□□ 1.15
Msh3-205ENSMUST00000187424 Cnga1P29974 684 aa22.21■■□□□ 1.15
Msh3-205ENSMUST00000187424 Ccdc129Q14B48 1034 aa22.18■■□□□ 1.14
Msh3-205ENSMUST00000187424 Kiaa0319Q5SZV5 1081 aa22.18■■□□□ 1.14
Msh3-205ENSMUST00000187424 Txnrd1Q9JMH6 613 aa22.18■■□□□ 1.14
Msh3-205ENSMUST00000187424 CatipB9EKE5 520 aa22.17■■□□□ 1.14
Msh3-205ENSMUST00000187424 Sf3b2Q3UJB0 878 aaKnown RBP22.15■■□□□ 1.14
Msh3-205ENSMUST00000187424 Kat6bQ8BRB7 1872 aa22.15■■□□□ 1.14
Msh3-205ENSMUST00000187424 PaskQ8CEE6 1383 aa22.14■■□□□ 1.14
Msh3-205ENSMUST00000187424 OscarQ8VBT3 265 aa22.14■■□□□ 1.13
Msh3-205ENSMUST00000187424 Sugp2Q8CH09 1067 aa22.13■■□□□ 1.13
Msh3-205ENSMUST00000187424 Sbno1Q689Z5 1390 aa22.12■■□□□ 1.13
Msh3-205ENSMUST00000187424 Pard3Q99NH2 1333 aa22.12■■□□□ 1.13
Msh3-205ENSMUST00000187424 Rtl5Q5DTT4 599 aa22.11■■□□□ 1.13
Msh3-205ENSMUST00000187424 Slc4a1apE9PX68 744 aa22.1■■□□□ 1.13
Msh3-205ENSMUST00000187424 Nid2O88322 1403 aa22.1■■□□□ 1.13
Msh3-205ENSMUST00000187424 Fyb1O35601 819 aa22.08■■□□□ 1.13
Msh3-205ENSMUST00000187424 ZgpatQ8VDM1 511 aa22.08■■□□□ 1.13
Msh3-205ENSMUST00000187424 Slc24a1Q91WD8 1130 aa22.08■■□□□ 1.13
Msh3-205ENSMUST00000187424 Znf335A2A5K6 1337 aa22.07■■□□□ 1.12
Msh3-205ENSMUST00000187424 Frmpd2A0A140LI67 1392 aa22.06■■□□□ 1.12
Msh3-205ENSMUST00000187424 PrxO55103 1391 aa22.05■■□□□ 1.12
Msh3-205ENSMUST00000187424 Kif16bB1AVY7 1312 aa22.05■■□□□ 1.12
Msh3-205ENSMUST00000187424 TimelessQ9R1X4 1197 aa22.04■■□□□ 1.12
Msh3-205ENSMUST00000187424 Fam184bQ0KK56 942 aa22.03■■□□□ 1.12
Msh3-205ENSMUST00000187424 Dzip1Q8BMD2 852 aa22.03■■□□□ 1.12
Msh3-205ENSMUST00000187424 Aebp2Q9Z248 504 aaKnown RBP22.03■■□□□ 1.12
Msh3-205ENSMUST00000187424 Nwd2Q6P5U7 1742 aa22.02■■□□□ 1.12
Msh3-205ENSMUST00000187424 Plekhg5Q66T02 1073 aa22.01■■□□□ 1.11
Msh3-205ENSMUST00000187424 Chd4Q6PDQ2 1915 aaKnown RBP22■■□□□ 1.11
Msh3-205ENSMUST00000187424 Pank3Q8R2W9 370 aa22■■□□□ 1.11
Msh3-205ENSMUST00000187424 Slc34a2Q9DBP0 697 aa22■■□□□ 1.11
Msh3-205ENSMUST00000187424 Mdc1Q5PSV9 1707 aa22■■□□□ 1.11
Msh3-205ENSMUST00000187424 Slx1bQ8BX32 270 aa21.99■■□□□ 1.11
Msh3-205ENSMUST00000187424 Akap11E9Q777 1895 aa21.98■■□□□ 1.11
Msh3-205ENSMUST00000187424 Ppp6r1Q7TSI3 856 aa21.98■■□□□ 1.11
Msh3-205ENSMUST00000187424 Taok3Q8BYC6 898 aa21.98■■□□□ 1.11
Msh3-205ENSMUST00000187424 Tmf1B9EKI3 1091 aa21.96■■□□□ 1.11
Msh3-205ENSMUST00000187424 Apba2P98084 750 aa21.96■■□□□ 1.11
Msh3-205ENSMUST00000187424 4930523C07RikE9Q2T4 99 aa21.95■■□□□ 1.1
Msh3-205ENSMUST00000187424 Prdm10Q3UTQ7 1184 aa21.95■■□□□ 1.1
Msh3-205ENSMUST00000187424 Inpp5dQ9ES52 1191 aa21.95■■□□□ 1.1
Msh3-205ENSMUST00000187424 HdgfP51859 237 aaKnown RBP21.94■■□□□ 1.1
Msh3-205ENSMUST00000187424 Pm20d1Q8C165 503 aa21.94■■□□□ 1.1
Msh3-205ENSMUST00000187424 Ubap1lG3UW59 384 aa21.93■■□□□ 1.1
Msh3-205ENSMUST00000187424 Ubr1O70481 1757 aa21.93■■□□□ 1.1
Msh3-205ENSMUST00000187424 Ncoa4Q5U4H9 625 aa21.93■■□□□ 1.1
Msh3-205ENSMUST00000187424 Astn2Q80Z10 1352 aa21.93■■□□□ 1.1
Msh3-205ENSMUST00000187424 Gimap6Q8K349 305 aa21.91■■□□□ 1.1
Msh3-205ENSMUST00000187424 Nlgn1Q99K10 843 aa21.91■■□□□ 1.1
Msh3-205ENSMUST00000187424 ClspnQ80YR7 1315 aa21.9■■□□□ 1.1
Msh3-205ENSMUST00000187424 Dennd6aQ8BH65 605 aa21.9■■□□□ 1.1
Msh3-205ENSMUST00000187424 Cdk12Q14AX6 1484 aaKnown RBP21.9■■□□□ 1.1
Msh3-205ENSMUST00000187424 Rab3gap2Q8BMG7 1366 aa21.89■■□□□ 1.1
Msh3-205ENSMUST00000187424 Smg6P61406 1418 aaKnown RBP21.89■■□□□ 1.09
Msh3-205ENSMUST00000187424 Scn7aB1AYL1 1681 aa21.88■■□□□ 1.09
Msh3-205ENSMUST00000187424 Nckap5lQ6GQX2 1323 aa21.88■■□□□ 1.09
Msh3-205ENSMUST00000187424 Gm21190A0A0G2JGJ6 266 aa21.88■■□□□ 1.09
Msh3-205ENSMUST00000187424 Zscan10Q3URR7 782 aa21.88■■□□□ 1.09
Msh3-205ENSMUST00000187424 CemipQ8BI06 1361 aa21.87■■□□□ 1.09
Msh3-205ENSMUST00000187424 Map2P20357 1828 aa21.87■■□□□ 1.09
Msh3-205ENSMUST00000187424 Ezh2Q61188 746 aaKnown RBP21.86■■□□□ 1.09
Msh3-205ENSMUST00000187424 Gm21698A0A087WQP8 267 aa21.85■■□□□ 1.09
Msh3-205ENSMUST00000187424 Gm21671G3UY31 267 aa21.85■■□□□ 1.09
Msh3-205ENSMUST00000187424 Dcaf11Q91VU6 549 aa21.85■■□□□ 1.09
Msh3-205ENSMUST00000187424 Gprasp1Q5U4C1 1347 aa21.84■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms