RNA–Protein interactions for RNA: ENSMUST00000164661.3

Trim43a-201, Transcript of Tripartite motif-containing protein 43A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim43a, Length 1,981 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43a-201ENSMUST00000164661 Fgd1P52734 960 aa11.85□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Lrrc7Q80TE7 1490 aa11.85□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Uhrf1bp1B2KF50 1429 aa11.85□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Tnpo1Q8BFY9 898 aaKnown RBP11.85□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Chmp4bQ9D8B3 224 aaKnown RBP11.85□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Ttc37F8VPK0 1563 aa11.84□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Amer1Q7TS75 1132 aa11.84□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Pdcl3Q8BVF2 240 aa11.84□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Antxr1Q9CZ52 562 aa11.84□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Phf14Q9D4H9 881 aa11.84□□□□□ -0.51
Trim43a-201ENSMUST00000164661 Ttc21aQ8C0S4 1314 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Gm6268A2A3U9 297 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Cavin4A2AMM0 362 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Apaf1O88879 1249 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Kif20aP97329 887 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Dusp27Q148W8 1138 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Fchsd2Q3USJ8 740 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Pcdh10E9PXQ7 1057 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 CastP51125 788 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Wwc1Q5SXA9 1104 aa11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Isy1Q69ZQ2 285 aaKnown RBP11.83□□□□□ -0.52
Trim43a-201ENSMUST00000164661 FanciQ8K368 1330 aa11.82□□□□□ -0.52
Trim43a-201ENSMUST00000164661 KnstrnQ9D9Z1 312 aaKnown RBP11.82□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Gli2Q0VGT2 1544 aa11.82□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Polr3glQ8R0C0 218 aa11.81□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Mroh1E0CZ22 1640 aa11.81□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Ift172Q6VH22 1749 aa11.81□□□□□ -0.52
Trim43a-201ENSMUST00000164661 SkilQ60665 675 aa11.81□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Exosc9Q9JHI7 438 aaKnown RBP11.81□□□□□ -0.52
Trim43a-201ENSMUST00000164661 AglF8VPN4 1532 aa11.8□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Rbm25B2RY56 838 aaKnown RBP11.79□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Ankrd50F7BE84 1390 aa11.79□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Ncapd2Q8K2Z4 1392 aa11.79□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Kiaa0556Q8C753 1610 aa11.79□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Cetn4Q8K4K1 168 aa11.79□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Terf2O35144 541 aa11.78□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Kif18aQ91WD7 886 aa11.78□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Pik3r4Q8VD65 1358 aa11.77□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Arhgap23Q69ZH9 1483 aa11.77□□□□□ -0.52
Trim43a-201ENSMUST00000164661 Gm10093D3YYI8 482 aa11.77□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Hdac1O09106 482 aaKnown RBP11.77□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Gtf2a1Q99PM3 378 aa11.77□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Armcx1Q9CX83 456 aa11.77□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Swt1Q9DBQ9 907 aa11.77□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Adamts7Q68SA9 1657 aa11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Brd1E9PZ26 1189 aaKnown RBP11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Gsto1O09131 240 aa11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 G3bp1P97855 465 aaKnown RBP11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 PtprtQ99M80 1454 aa11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Mfap1aC0HKD8 439 aaKnown RBP11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Mfap1bC0HKD9 439 aaKnown RBP11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Mcm4P49717 862 aa11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Ripply1Q2WG77 201 aa11.76□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Arid3cA6PWV5 409 aa11.75□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Maco1Q7TQE6 664 aaKnown RBP11.75□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Rsph4aQ8BYM7 716 aa11.75□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Trim26Q99PN3 545 aa11.75□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Atp7bQ64446 1462 aa11.75□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Usp32F8VPZ3 1604 aa11.75□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Ccdc60Q8C4J0 545 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Aldh1l1Q8R0Y6 902 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Kif2cQ922S8 721 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Catsper2A2ARP9 588 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 LifrP42703 1092 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Rsph3aQ3UFY4 516 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Trim28Q62318 834 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Tshz2Q68FE9 1030 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Q8BT18 775 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Dnttip2Q8R2M2 758 aaKnown RBP11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Cluap1Q8R3P7 413 aa11.74□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Plekhg1F6S200 1446 aa11.73□□□□□ -0.53
Trim43a-201ENSMUST00000164661 AU019823E9PUQ3 292 aa11.73□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Cavin2Q63918 418 aaKnown RBP11.73□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Cgnl1Q6AW69 1298 aa11.73□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Pabpn1Q8CCS6 302 aaKnown RBP11.73□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Naip7Q9JIB3 1402 aa11.73□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Kdm4cQ8VCD7 1054 aa11.72□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Q4VA45 678 aa11.72□□□□□ -0.53
Trim43a-201ENSMUST00000164661 MvpQ9EQK5 861 aa11.72□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Ppp1r3fQ9JIG4 799 aa11.72□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Knl1Q66JQ7 1612 aa11.72□□□□□ -0.53
Trim43a-201ENSMUST00000164661 CltcQ68FD5 1675 aaKnown RBP11.72□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Pnmal2G3X9N3 661 aa11.71□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Ssh1Q76I79 1042 aa11.71□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Rrp9Q91WM3 475 aaKnown RBP11.71□□□□□ -0.53
Trim43a-201ENSMUST00000164661 Ptch1Q61115 1434 aa11.7□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Prrc2bQ7TPM1 1486 aaKnown RBP11.7□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Gnai1B2RSH2 354 aa11.7□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Plekhm2Q80TQ5 1018 aa11.7□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Cog6Q8R3I3 657 aa11.7□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Gnai3Q9DC51 354 aa11.7□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Ankrd44B2RXR6 993 aa11.69□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Ppp1r15aP17564 657 aa11.69□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Q3UPC7 1272 aa11.69□□□□□ -0.54
Trim43a-201ENSMUST00000164661 HnrnpuQ8VEK3 800 aaKnown RBP11.69□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Sos1Q62245 1319 aa11.69□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Prdm2A2A7B5 1709 aaKnown RBP11.69□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Wdr63B2RY71 923 aa11.68□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Slc12a5Q91V14 1138 aa11.68□□□□□ -0.54
Trim43a-201ENSMUST00000164661 Vamp4O70480 141 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms