RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Sbno1Q689Z5 1390 aa22.47■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Siglec1Q62230 1695 aa22.47■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Cadps2Q8BYR5 1297 aa22.47■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Abca15E9PWH4 1668 aa22.47■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Dmrt2Q8BG36 561 aa22.45■■□□□ 1.19
Tpm1-215ENSMUST00000113705 Frmpd2A0A140LI67 1392 aa22.45■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Prdm10Q3UTQ7 1184 aa22.45■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Arhgef1Q61210 920 aaKnown RBP22.45■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Cwc22Q8C5N3 908 aaKnown RBP22.43■■□□□ 1.18
Tpm1-215ENSMUST00000113705 TimelessQ9R1X4 1197 aa22.43■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Kif16bB1AVY7 1312 aa22.43■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Tex14Q7M6U3 1450 aa22.43■■□□□ 1.18
Tpm1-215ENSMUST00000113705 PaskQ8CEE6 1383 aa22.42■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Kif7B7ZNG0 1348 aa22.41■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Dzip1Q8BMD2 852 aa22.4■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Slc4a1apE9PX68 744 aa22.4■■□□□ 1.18
Tpm1-215ENSMUST00000113705 NinlQ6ZQ12 1394 aa22.39■■□□□ 1.18
Tpm1-215ENSMUST00000113705 Lrrc59Q922Q8 307 aaKnown RBP22.39■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Col16a1Q8BLX7 1580 aa22.39■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Tet3Q8BG87 1668 aa22.37■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Emilin2Q8K482 1074 aa22.37■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Txnrd1Q9JMH6 613 aa22.37■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Eno4Q8C042 619 aa22.36■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Znf335A2A5K6 1337 aa22.36■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Cdhr2E9Q7P9 1308 aa22.35■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Gm21190A0A0G2JGJ6 266 aa22.33■■□□□ 1.17
Tpm1-215ENSMUST00000113705 Gimap6Q8K349 305 aa22.32■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Nid2O88322 1403 aa22.31■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Bcl9lQ67FY2 1494 aa22.3■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Zmym3Q9JLM4 1370 aa22.29■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Nfat5Q9WV30 1534 aa22.29■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Dennd6aQ8BH65 605 aa22.29■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Nckap5lQ6GQX2 1323 aa22.28■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Gm21698A0A087WQP8 267 aa22.28■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Gm21671G3UY31 267 aa22.28■■□□□ 1.16
Tpm1-215ENSMUST00000113705 Psrc1Q9D0P7 329 aa22.28■■□□□ 1.16
Tpm1-215ENSMUST00000113705 ZgpatQ8VDM1 511 aa22.27■■□□□ 1.16
Tpm1-215ENSMUST00000113705 HdgfP51859 237 aaKnown RBP22.26■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Fam184bQ0KK56 942 aa22.26■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Ncapd2Q8K2Z4 1392 aa22.26■■□□□ 1.15
Tpm1-215ENSMUST00000113705 PrxO55103 1391 aa22.25■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Chd4Q6PDQ2 1915 aaKnown RBP22.25■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Astn2Q80Z10 1352 aa22.25■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Rtl5Q5DTT4 599 aa22.25■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Pank3Q8R2W9 370 aa22.25■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Nlgn1Q99K10 843 aa22.25■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Ncoa4Q5U4H9 625 aa22.24■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Tmf1B9EKI3 1091 aa22.22■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Cabp4Q8VHC5 271 aa22.22■■□□□ 1.15
Tpm1-215ENSMUST00000113705 Inpp5dQ9ES52 1191 aa22.21■■□□□ 1.15
Tpm1-215ENSMUST00000113705 InhbeO08717 350 aa22.2■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Cdk12Q14AX6 1484 aaKnown RBP22.2■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Sgsm1Q8BPQ7 1093 aa22.2■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Ubr1O70481 1757 aa22.19■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Tnrc6cQ3UHC0 1690 aaKnown RBP22.18■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Sf3b2Q3UJB0 878 aaKnown RBP22.18■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Dnajc10Q9DC23 793 aa22.18■■□□□ 1.14
Tpm1-215ENSMUST00000113705 FancaQ9JL70 1439 aa22.17■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Kcnh5Q920E3 988 aa22.17■■□□□ 1.14
Tpm1-215ENSMUST00000113705 TnrQ8BYI9 1358 aa22.16■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Birc3O08863 600 aa22.15■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Scn7aB1AYL1 1681 aa22.15■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Shank2Q80Z38 1476 aa22.15■■□□□ 1.14
Tpm1-215ENSMUST00000113705 MpndQ3TV65 487 aa22.15■■□□□ 1.14
Tpm1-215ENSMUST00000113705 TatQ8QZR1 454 aa22.15■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Dcaf11Q91VU6 549 aa22.15■■□□□ 1.14
Tpm1-215ENSMUST00000113705 Mdc1Q5PSV9 1707 aa22.14■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Map2P20357 1828 aa22.13■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Fmnl2A2APV2 1086 aa22.12■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Card10P58660 1021 aa22.12■■□□□ 1.13
Tpm1-215ENSMUST00000113705 CemipQ8BI06 1361 aa22.12■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Pard3Q99NH2 1333 aa22.12■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Amotl2Q8K371 772 aa22.11■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Ccdc129Q14B48 1034 aa22.1■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Ltbp1Q8CG19 1712 aa22.09■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Zscan10Q3URR7 782 aa22.09■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Plekhg5Q66T02 1073 aa22.09■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Tmem132eQ6IEE6 982 aa22.09■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Robo1O89026 1612 aa22.09■■□□□ 1.13
Tpm1-215ENSMUST00000113705 Aebp2Q9Z248 504 aaKnown RBP22.07■■□□□ 1.12
Tpm1-215ENSMUST00000113705 Smg6P61406 1418 aaKnown RBP22.07■■□□□ 1.12
Tpm1-215ENSMUST00000113705 Cacna1sQ02789 1880 aa22.06■■□□□ 1.12
Tpm1-215ENSMUST00000113705 ClspnQ80YR7 1315 aa22.06■■□□□ 1.12
Tpm1-215ENSMUST00000113705 IbtkQ6ZPR6 1352 aaKnown RBP22.06■■□□□ 1.12
Tpm1-215ENSMUST00000113705 Slx1bQ8BX32 270 aa22.06■■□□□ 1.12
Tpm1-215ENSMUST00000113705 Ano8Q6PB70 1060 aa22.04■■□□□ 1.12
Tpm1-215ENSMUST00000113705 Nol11Q8BJW5 723 aaKnown RBP22.04■■□□□ 1.12
Tpm1-215ENSMUST00000113705 RgmbQ7TQ33 436 aa22.02■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Wdr66E9Q743 1299 aa22.01■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Kcna4Q61423 654 aa22.01■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Zeb2Q9R0G7 1215 aa22.01■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Fer1l6E0CZ42 1862 aa22■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Ubap1lG3UW59 384 aa21.99■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Hoxc9P09633 260 aa21.99■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Pak3Q61036 559 aa21.98■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Sugp2Q8CH09 1067 aa21.98■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Mast2Q60592 1734 aa21.98■■□□□ 1.11
Tpm1-215ENSMUST00000113705 OptnQ8K3K8 584 aa21.97■■□□□ 1.11
Tpm1-215ENSMUST00000113705 Gprasp1Q5U4C1 1347 aa21.97■■□□□ 1.11
Tpm1-215ENSMUST00000113705 CrklP47941 303 aa21.97■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms