RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Commd10Q8JZY2 202 aa14.77□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Pabpn1Q8CCS6 302 aaKnown RBP14.77□□□□□ -0.04
Ssh1-202ENSMUST00000112298 Ehmt1Q5DW34 1296 aa14.77□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Zfp444Q3TDV8 331 aaKnown RBP14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 NefhP19246 1090 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Cd109Q8R422 1442 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Stim1P70302 685 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 TnmdQ9EP64 317 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Kcnh8P59111 1102 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Bag1Q60739 355 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Tango6Q8C3S2 1079 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Sirt1Q923E4 737 aa14.76□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Gm10471E9Q1C7 252 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Shroom4Q1W617 1475 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Efcab5A0JP43 1406 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Lrrc45Q8CIM1 670 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 TxlnbQ8VBT1 685 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Stard3nlQ9DCI3 235 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Krt85Q9Z2T6 507 aa14.75□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Atf3Q60765 181 aa14.74□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Gps2Q921N8 327 aa14.74□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Olfml1Q8BSH2 233 aa14.74□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Fmnl2A2APV2 1086 aa14.74□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Erc1Q99MI1 1120 aa14.74□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Fam184aE9PW83 1143 aa14.73□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Bcl2l13P59017 434 aa14.73□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Med4Q9CQA5 270 aa14.73□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Cdc45Q9Z1X9 566 aa14.73□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Plekhg5Q66T02 1073 aa14.73□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Slc4a2P13808 1237 aaKnown RBP14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 IbspQ61711 324 aa14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Q7TT23 1179 aa14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Smg7Q5RJH6 1138 aaKnown RBP14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Cdkl5Q3UTQ8 938 aa14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Fchsd2Q3USJ8 740 aa14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Cep57l1Q8VDS7 400 aa14.72□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Sptbn5F6UCX4 1208 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Dnaaf4Q8R368 420 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Abl1P00520 1123 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 CenpqQ9CPQ5 267 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Cep89Q9CZX2 791 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Q9D9H8 365 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Cnnm1Q0GA42 951 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Gtf2a1Q99PM3 378 aa14.71□□□□□ -0.05
Ssh1-202ENSMUST00000112298 Prpf4bQ61136 1007 aaKnown RBP14.71□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Ppp6r1Q7TSI3 856 aa14.71□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Kif20aP97329 887 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Sel1lQ9Z2G6 790 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Arhgap5P97393 1501 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Map9Q3TRR0 646 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Pmfbp1Q9WVQ0 1022 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Cnnm3Q32NY4 713 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Plcd4Q8K3R3 807 aa14.7□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Cyp26c1B2RXA7 518 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Ccdc102aQ3TMW1 549 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Washc4Q3UMB9 1173 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Rsph6aQ8CDR2 708 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Cfap58B2RW38 873 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Kif18aQ91WD7 886 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Cfap45Q9D9U9 551 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Gimap6Q8K349 305 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Washc2Q6PGL7 1334 aa14.69□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Cavin1O54724 392 aa14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Abcd1P48410 736 aa14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Nup88Q8CEC0 753 aaKnown RBP14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Mrvi1Q9WUX5 899 aaKnown RBP14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Zranb3Q6NZP1 1069 aa14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Cog6Q8R3I3 657 aa14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Lmbr1Q9JIT0 490 aa14.68□□□□□ -0.06
Ssh1-202ENSMUST00000112298 TbcaP48428 108 aaKnown RBP14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Jakmip1Q8BVL9 626 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Hdgfl1Q2VPR5 283 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Tmc1Q8R4P5 757 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Mctp1E9PV86 951 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Ubap1lG3UW59 384 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 CastP51125 788 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Adck5Q80V03 582 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Znf771Q8BJ90 317 aa14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Ncbp3Q8BZR9 615 aaKnown RBP14.67□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Wasf1Q8R5H6 559 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Naip1Q9QWK5 1403 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 MpripP97434 1024 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Rbm10Q99KG3 930 aaKnown RBP14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Ssh1Q76I79 1042 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Otud6bQ8K2H2 294 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Krt84Q99M73 603 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Jakmip2D3YXK0 820 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Trim55G3X8Y1 545 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Apaf1O88879 1249 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Top1mtQ8R4U6 593 aa14.66□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Plekhd1B2RPU2 505 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Fkbp4P30416 458 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Lrrfip1Q3UZ39 729 aaKnown RBP14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Slc13a4Q8BZ82 625 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Chrna2Q91X60 512 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 CenphQ9QYM8 241 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Stk11ipQ3TAA7 1072 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 ItpripQ3TNL8 555 aa14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Ncbp1Q3UYV9 790 aaKnown RBP14.65□□□□□ -0.06
Ssh1-202ENSMUST00000112298 Gbp4Q61107 620 aa14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 87.4 ms