RNA–Protein interactions for RNA: ENSMUST00000107344.7

Chtop-206, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 2,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-206ENSMUST00000107344 Sptbn5F6UCX4 1208 aa17.58■□□□□ 0.4
Chtop-206ENSMUST00000107344 Plcb2A3KGF7 1181 aa17.58■□□□□ 0.4
Chtop-206ENSMUST00000107344 Ttc21bQ0HA38 1315 aa17.57■□□□□ 0.4
Chtop-206ENSMUST00000107344 Aplp1Q03157 653 aa17.57■□□□□ 0.4
Chtop-206ENSMUST00000107344 Atp10dQ8K2X1 1416 aa17.56■□□□□ 0.4
Chtop-206ENSMUST00000107344 Rnf17Q99MV7 1640 aa17.56■□□□□ 0.4
Chtop-206ENSMUST00000107344 Cald1E9QA15 768 aaKnown RBP17.55■□□□□ 0.4
Chtop-206ENSMUST00000107344 ShprhQ7TPQ3 1674 aa17.55■□□□□ 0.4
Chtop-206ENSMUST00000107344 Ylpm1Q9R0I7 1386 aaKnown RBP17.55■□□□□ 0.4
Chtop-206ENSMUST00000107344 Chd1P40201 1711 aa17.54■□□□□ 0.4
Chtop-206ENSMUST00000107344 Ythdc2B2RR83 1445 aaKnown RBP17.54■□□□□ 0.4
Chtop-206ENSMUST00000107344 Myo3aQ8K3H5 1613 aa17.54■□□□□ 0.4
Chtop-206ENSMUST00000107344 AU019823E9PUQ3 292 aa17.53■□□□□ 0.4
Chtop-206ENSMUST00000107344 Nectin2P32507 530 aa17.53■□□□□ 0.4
Chtop-206ENSMUST00000107344 Exosc9Q9JHI7 438 aaKnown RBP17.53■□□□□ 0.4
Chtop-206ENSMUST00000107344 Q8BT18 775 aa17.52■□□□□ 0.4
Chtop-206ENSMUST00000107344 Bms1Q6PGF5 1284 aaKnown RBP17.52■□□□□ 0.4
Chtop-206ENSMUST00000107344 Plin1Q8CGN5 517 aa17.52■□□□□ 0.4
Chtop-206ENSMUST00000107344 Pola1P33609 1465 aa17.52■□□□□ 0.4
Chtop-206ENSMUST00000107344 Cfap74Q3UY96 1578 aa17.51■□□□□ 0.39
Chtop-206ENSMUST00000107344 Rfx1P48377 963 aa17.51■□□□□ 0.39
Chtop-206ENSMUST00000107344 Gzf1Q4VBD9 706 aa17.51■□□□□ 0.39
Chtop-206ENSMUST00000107344 Prdm4Q80V63 803 aa17.51■□□□□ 0.39
Chtop-206ENSMUST00000107344 Rabep1O35551 862 aa17.51■□□□□ 0.39
Chtop-206ENSMUST00000107344 Tmco5bQ80X59 307 aa17.51■□□□□ 0.39
Chtop-206ENSMUST00000107344 Robo2Q7TPD3 1470 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Catsper2A2ARP9 588 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Kcnj4P52189 445 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Pdcl2Q78Y63 240 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Znf521Q6KAS7 1311 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 FanciQ8K368 1330 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Igf1rQ60751 1373 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Ccdc60Q8C4J0 545 aa17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Ccar1Q8CH18 1146 aaKnown RBP17.5■□□□□ 0.39
Chtop-206ENSMUST00000107344 Ercc6lQ8BHK9 1240 aa17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 Becn1O88597 448 aa17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 Map4k4P97820 1233 aaKnown RBP17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 Lemd3Q9WU40 921 aa17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 Itsn2Q9Z0R6 1659 aa17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 Cfap65Q3V0B4 1847 aa17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 IbtkQ6ZPR6 1352 aaKnown RBP17.49■□□□□ 0.39
Chtop-206ENSMUST00000107344 Chrm1P12657 460 aa17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 Kank4Q6P9J5 1016 aa17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 Arhgap4B1AUY3 965 aa17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 Isy1Q69ZQ2 285 aaKnown RBP17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 GorabQ8BRM2 368 aa17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 Tmc1Q8R4P5 757 aa17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 Pdcd11Q6NS46 1862 aaKnown RBP17.48■□□□□ 0.39
Chtop-206ENSMUST00000107344 Atp2b3Q0VF55 1220 aa17.47■□□□□ 0.39
Chtop-206ENSMUST00000107344 AatkQ80YE4 1365 aa17.47■□□□□ 0.39
Chtop-206ENSMUST00000107344 Cog6Q8R3I3 657 aa17.46■□□□□ 0.39
Chtop-206ENSMUST00000107344 Maco1Q7TQE6 664 aaKnown RBP17.46■□□□□ 0.39
Chtop-206ENSMUST00000107344 Pabpn1Q8CCS6 302 aaKnown RBP17.46■□□□□ 0.39
Chtop-206ENSMUST00000107344 IqubQ8CDK3 788 aa17.46■□□□□ 0.39
Chtop-206ENSMUST00000107344 NhsB1AV60 1647 aa17.46■□□□□ 0.39
Chtop-206ENSMUST00000107344 Abcc3B2RX12 1523 aa17.46■□□□□ 0.39
Chtop-206ENSMUST00000107344 Mkrn3Q60764 544 aa17.46■□□□□ 0.38
Chtop-206ENSMUST00000107344 MsnP26041 577 aaKnown RBP17.45■□□□□ 0.38
Chtop-206ENSMUST00000107344 Tbc1d32Q3URV1 1296 aa17.45■□□□□ 0.38
Chtop-206ENSMUST00000107344 Xrn1P97789 1719 aaKnown RBP17.44■□□□□ 0.38
Chtop-206ENSMUST00000107344 Zmym3Q9JLM4 1370 aa17.44■□□□□ 0.38
Chtop-206ENSMUST00000107344 Pank2Q3U4S0 443 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 Rps6ka5Q8C050 863 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 Scaf11E9PZM7 1456 aaKnown RBP17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 PtprtQ99M80 1454 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 1700017N19RikA0A087WPJ1 469 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 Stk11ipQ3TAA7 1072 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 Hecw1Q8K4P8 1604 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 Pnma3Q8JZW8 466 aa17.43■□□□□ 0.38
Chtop-206ENSMUST00000107344 Kif18aQ91WD7 886 aa17.42■□□□□ 0.38
Chtop-206ENSMUST00000107344 Nsfl1cQ9CZ44 370 aaKnown RBP17.42■□□□□ 0.38
Chtop-206ENSMUST00000107344 Nphp4P59240 1425 aa17.42■□□□□ 0.38
Chtop-206ENSMUST00000107344 Mrvi1Q9WUX5 899 aaKnown RBP17.42■□□□□ 0.38
Chtop-206ENSMUST00000107344 Kidins220E9Q9B7 1793 aa17.41■□□□□ 0.38
Chtop-206ENSMUST00000107344 Myom1Q62234 1667 aaKnown RBP17.41■□□□□ 0.38
Chtop-206ENSMUST00000107344 Gtpbp4Q99ME9 634 aaKnown RBP17.41■□□□□ 0.38
Chtop-206ENSMUST00000107344 Uggt2E9Q4X2 1504 aa17.41■□□□□ 0.38
Chtop-206ENSMUST00000107344 Sh3bp1P55194 680 aa17.4■□□□□ 0.38
Chtop-206ENSMUST00000107344 Rbm25B2RY56 838 aaKnown RBP17.4■□□□□ 0.38
Chtop-206ENSMUST00000107344 Dmrtc1Q9D9R7 182 aa17.4■□□□□ 0.38
Chtop-206ENSMUST00000107344 Abca6Q8K441 1624 aa17.39■□□□□ 0.38
Chtop-206ENSMUST00000107344 AnkarA2RT91 1465 aa17.39■□□□□ 0.37
Chtop-206ENSMUST00000107344 Myom2Q14BI5 1463 aa17.39■□□□□ 0.37
Chtop-206ENSMUST00000107344 MycnP03966 462 aaKnown RBP17.39■□□□□ 0.37
Chtop-206ENSMUST00000107344 Fam135bQ9DAI6 1403 aa17.39■□□□□ 0.37
Chtop-206ENSMUST00000107344 Wdr78E9PYY5 807 aa17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 Ncbp3Q8BZR9 615 aaKnown RBP17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 Fez1Q8K0X8 392 aa17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 AU022751B1B0V2 589 aa17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 Terf2O35144 541 aa17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 Cep152A2AUM9 1736 aaKnown RBP17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 Myo5cE9Q1F5 1742 aa17.38■□□□□ 0.37
Chtop-206ENSMUST00000107344 Atl3Q91YH5 541 aa17.37■□□□□ 0.37
Chtop-206ENSMUST00000107344 Kif2cQ922S8 721 aa17.37■□□□□ 0.37
Chtop-206ENSMUST00000107344 Phlpp2Q8BXA7 1320 aa17.37■□□□□ 0.37
Chtop-206ENSMUST00000107344 Tfip11Q9ERA6 838 aaKnown RBP17.37■□□□□ 0.37
Chtop-206ENSMUST00000107344 G3bp1P97855 465 aaKnown RBP17.37■□□□□ 0.37
Chtop-206ENSMUST00000107344 Zmynd15Q8C0R7 736 aa17.37■□□□□ 0.37
Chtop-206ENSMUST00000107344 Cdk5rap2Q8K389 1822 aa17.36■□□□□ 0.37
Chtop-206ENSMUST00000107344 Abca8bQ8K440 1620 aa17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms