RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Ncbp3Q8BZR9 615 aaKnown RBP14.06□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Topaz1E5FYH1 1653 aa14.05□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 GphnQ8BUV3 769 aaKnown RBP14.05□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Rwdd1Q9CQK7 243 aa14.05□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Slc12a5Q91V14 1138 aa14.04□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Atxn3Q9CVD2 355 aa14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Prkrip1Q9CWV6 186 aaKnown RBP14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 C5P06684 1680 aa14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Als2Q920R0 1651 aa14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Znf541Q0GGX2 1363 aa14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 MyclP10166 368 aa14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 TnikP83510 1323 aa14.03□□□□□ -0.16
Ttc39a-202ENSMUST00000106618 Birc3O08863 600 aa14.01□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Ppp1r15aP17564 657 aa14.01□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Mbd3Q9Z2D8 285 aaKnown RBP14□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Abcc10Q8R4P9 1501 aa14□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Alpk3Q924C5 1678 aa14□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Mon2Q80TL7 1715 aa14□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Hoxb7P09024 217 aa14□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Dusp27Q148W8 1138 aa14□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Uhrf1bp1B2KF50 1429 aa13.99□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Znf335A2A5K6 1337 aa13.99□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 NeflP08551 543 aa13.99□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Fchsd2Q3USJ8 740 aa13.99□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 PalmQ9Z0P4 383 aa13.99□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Slc4a3P16283 1227 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Rims2Q9EQZ7 1530 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Uhrf1bp1lA2RSJ4 1457 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Astn2Q80Z10 1352 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Q4VA45 678 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Mdc1Q5PSV9 1707 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 NalcnQ8BXR5 1738 aa13.98□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Spef2Q8C9J3 1734 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Mapk8ip3Q9ESN9 1337 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Cavin4A2AMM0 362 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Idi1P58044 227 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Ciz1Q8VEH2 845 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Apbb1Q9QXJ1 710 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Pik3c2aQ61194 1686 aa13.97□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Med1Q925J9 1575 aa13.96□□□□□ -0.17
Ttc39a-202ENSMUST00000106618 Fam71e1A1L3C1 212 aa13.96□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Supt16hQ920B9 1047 aa13.96□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Rimbp3Q3V0F0 1606 aa13.95□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Gm10563F6WIE4 79 aa13.95□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Rsph6aQ8CDR2 708 aa13.95□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Ubr1O70481 1757 aa13.95□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Map2P20357 1828 aa13.95□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Thsd7aQ69ZU6 1645 aa13.94□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 CemipQ8BI06 1361 aa13.94□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 PaskQ8CEE6 1383 aa13.94□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Ksr2Q3UVC0 959 aa13.94□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Liat1Q810M6 228 aa13.94□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 NgefQ8CHT1 710 aa13.94□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Col16a1Q8BLX7 1580 aa13.93□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Tmem94Q7TSH8 1360 aa13.93□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 C3P01027 1663 aa13.93□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Fam135bQ9DAI6 1403 aa13.93□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 MlecQ6ZQI3 291 aaKnown RBP13.92□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Atp7bQ64446 1462 aa13.92□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Cdk12Q14AX6 1484 aaKnown RBP13.92□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Ttc21aQ8C0S4 1314 aa13.92□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Sox12Q04890 314 aa13.91□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Ccar1Q8CH18 1146 aaKnown RBP13.91□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Kdm2bQ6P1G2 1309 aa13.91□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Col14a1Q80X19 1797 aa13.91□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Scn7aB1AYL1 1681 aa13.91□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Swt1Q9DBQ9 907 aa13.91□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Camta1A2A891 1682 aa13.9□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Znf521Q6KAS7 1311 aa13.9□□□□□ -0.18
Ttc39a-202ENSMUST00000106618 Ankrd50F7BE84 1390 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Eif4a2P10630 407 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 CastP51125 788 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Trim58Q5NCC9 485 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Pank1Q8K4K6 548 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Tns3Q5SSZ5 1440 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Sipa1l2Q80TE4 1722 aa13.89□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Tspyl2Q7TQI8 677 aa13.88□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Mcm10Q0VBD2 885 aa13.87□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Ap3b2Q9JME5 1082 aa13.87□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Unc13bQ9Z1N9 1602 aa13.87□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Ecm2Q5FW85 670 aa13.87□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Polr3glQ8R0C0 218 aa13.87□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Frmpd2A0A140LI67 1392 aa13.86□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Phlpp1Q8CHE4 1687 aa13.86□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Dennd6aQ8BH65 605 aa13.86□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Nlgn1Q99K10 843 aa13.86□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Trim26Q99PN3 545 aa13.86□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Parp14Q2EMV9 1817 aa13.86□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Nrxn3Q6P9K9 1571 aa13.85□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Rbm25B2RY56 838 aaKnown RBP13.85□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 PtprvP70289 1705 aa13.85□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Zmym3Q9JLM4 1370 aa13.85□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 FancaQ9JL70 1439 aa13.84□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 MpripP97434 1024 aa13.83□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Cabp2Q9JLK4 216 aa13.83□□□□□ -0.19
Ttc39a-202ENSMUST00000106618 Tmem2Q5FWI3 1383 aa13.83□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Nckap5lQ6GQX2 1323 aa13.83□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Slc35g1Q8BY79 368 aa13.83□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 NudcO35685 332 aaKnown RBP13.82□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Pak3Q61036 559 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 205.3 ms