RNA–Protein interactions for RNA: ENSMUST00000072699.12

Hmgb3-202, Transcript of High mobility group protein B3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb3, Length 1,571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3-202ENSMUST00000072699 Ddx54Q8K4L0 874 aaKnown RBP23.29■■□□□ 1.32
Hmgb3-202ENSMUST00000072699 Kif16bB1AVY7 1312 aa23.28■■□□□ 1.32
Hmgb3-202ENSMUST00000072699 Arhgef1Q61210 920 aaKnown RBP23.27■■□□□ 1.32
Hmgb3-202ENSMUST00000072699 Siglec1Q62230 1695 aa23.27■■□□□ 1.32
Hmgb3-202ENSMUST00000072699 Prdm10Q3UTQ7 1184 aa23.27■■□□□ 1.32
Hmgb3-202ENSMUST00000072699 Gimap6Q8K349 305 aa23.27■■□□□ 1.32
Hmgb3-202ENSMUST00000072699 NinlQ6ZQ12 1394 aa23.26■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 MypopQ8R4U1 393 aa23.26■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Cypt2Q6P924 180 aa23.25■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Fam184bQ0KK56 942 aa23.24■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Lrrc59Q922Q8 307 aaKnown RBP23.24■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Slit2Q9R1B9 1521 aa23.24■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Dzip1Q8BMD2 852 aa23.23■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Emilin2Q8K482 1074 aa23.23■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 PaskQ8CEE6 1383 aa23.23■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Tex14Q7M6U3 1450 aa23.22■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Chd4Q6PDQ2 1915 aaKnown RBP23.21■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Tmf1B9EKI3 1091 aa23.21■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 ZgpatQ8VDM1 511 aa23.21■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 Lrp6O88572 1613 aa23.21■■□□□ 1.31
Hmgb3-202ENSMUST00000072699 PrxO55103 1391 aa23.2■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 HdgfP51859 237 aaKnown RBP23.2■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Pank3Q8R2W9 370 aa23.2■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Zmym3Q9JLM4 1370 aa23.2■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Tet3Q8BG87 1668 aa23.19■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 GapdhsQ64467 440 aa23.19■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Col16a1Q8BLX7 1580 aa23.19■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Gm21190A0A0G2JGJ6 266 aa23.18■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Ncoa4Q5U4H9 625 aa23.18■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Dmrt2Q8BG36 561 aa23.18■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Dennd6aQ8BH65 605 aa23.18■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 ClspnQ80YR7 1315 aa23.18■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Cdhr2E9Q7P9 1308 aa23.17■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Astn2Q80Z10 1352 aa23.17■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Plekhg5Q66T02 1073 aa23.15■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Bcl9lQ67FY2 1494 aa23.15■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Txnrd1Q9JMH6 613 aa23.14■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Ncapd2Q8K2Z4 1392 aa23.14■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Nid2O88322 1403 aa23.14■■□□□ 1.3
Hmgb3-202ENSMUST00000072699 Inpp5dQ9ES52 1191 aa23.14■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Nlgn1Q99K10 843 aa23.13■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Gm21698A0A087WQP8 267 aa23.12■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Gm21671G3UY31 267 aa23.12■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Cabp4Q8VHC5 271 aa23.12■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Kcnh5Q920E3 988 aa23.1■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Nfat5Q9WV30 1534 aa23.1■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Rtl5Q5DTT4 599 aa23.1■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Dcaf11Q91VU6 549 aa23.1■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Ubr1O70481 1757 aa23.09■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Cdk12Q14AX6 1484 aaKnown RBP23.09■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Wdr66E9Q743 1299 aa23.08■■□□□ 1.29
Hmgb3-202ENSMUST00000072699 Mdc1Q5PSV9 1707 aa23.08■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Nckap5lQ6GQX2 1323 aa23.07■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Map2P20357 1828 aa23.06■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Zscan10Q3URR7 782 aa23.06■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Eno4Q8C042 619 aa23.06■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Aebp2Q9Z248 504 aaKnown RBP23.06■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 CemipQ8BI06 1361 aa23.05■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 InhbeO08717 350 aa23.05■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 TatQ8QZR1 454 aa23.04■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Scn7aB1AYL1 1681 aa23.03■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Fmnl2A2APV2 1086 aa23.03■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Kif7B7ZNG0 1348 aa23.03■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 Psrc1Q9D0P7 329 aa23.02■■□□□ 1.28
Hmgb3-202ENSMUST00000072699 IbtkQ6ZPR6 1352 aaKnown RBP23.01■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Birc3O08863 600 aa23.01■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Dnajc10Q9DC23 793 aa23.01■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Card10P58660 1021 aa23.01■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Scaf1Q5U4C3 1256 aaKnown RBP23.01■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Smg6P61406 1418 aaKnown RBP23■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 TnrQ8BYI9 1358 aa22.99■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 FancaQ9JL70 1439 aa22.99■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Sf3b2Q3UJB0 878 aaKnown RBP22.98■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Ano8Q6PB70 1060 aa22.98■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Amotl2Q8K371 772 aa22.98■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Tnrc6cQ3UHC0 1690 aaKnown RBP22.97■■□□□ 1.27
Hmgb3-202ENSMUST00000072699 Mapk8ip2Q9ERE9 830 aa22.95■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Hoxb7P09024 217 aa22.94■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Gprasp1Q5U4C1 1347 aa22.94■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Pard3Q99NH2 1333 aa22.94■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Robo1O89026 1612 aa22.94■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Nol11Q8BJW5 723 aaKnown RBP22.93■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Slx1bQ8BX32 270 aa22.93■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Zeb2Q9R0G7 1215 aa22.93■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Shank2Q80Z38 1476 aa22.93■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Cacna1sQ02789 1880 aa22.89■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Tmem132eQ6IEE6 982 aa22.89■■□□□ 1.26
Hmgb3-202ENSMUST00000072699 Kat6bQ8BRB7 1872 aa22.88■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Sgsm1Q8BPQ7 1093 aa22.88■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Ccdc129Q14B48 1034 aa22.87■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Hoxc9P09633 260 aa22.86■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 RgmbQ7TQ33 436 aa22.84■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Fer1l6E0CZ42 1862 aa22.83■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Rad17Q6NXW6 688 aa22.83■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Pm20d1Q8C165 503 aa22.83■■□□□ 1.25
Hmgb3-202ENSMUST00000072699 Ltbp1Q8CG19 1712 aa22.83■■□□□ 1.24
Hmgb3-202ENSMUST00000072699 CrklP47941 303 aa22.82■■□□□ 1.24
Hmgb3-202ENSMUST00000072699 Pak3Q61036 559 aa22.82■■□□□ 1.24
Hmgb3-202ENSMUST00000072699 OptnQ8K3K8 584 aa22.82■■□□□ 1.24
Hmgb3-202ENSMUST00000072699 Akap11E9Q777 1895 aa22.82■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms