RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Plekhg1F6S200 1446 aa10.67□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Gli2Q0VGT2 1544 aa10.67□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Slit2Q9R1B9 1521 aa10.67□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Q4VA45 678 aa10.66□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Nsd2Q8BVE8 1365 aa10.65□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Rad21Q61550 635 aaKnown RBP10.65□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 D430041D05RikF6ZGR6 1678 aa10.65□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Phlpp2Q8BXA7 1320 aa10.65□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Ttc21aQ8C0S4 1314 aa10.65□□□□□ -0.7
Pcdh9-201ENSMUST00000068992 Gli3Q61602 1583 aa10.65□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Ptch1Q61115 1434 aa10.64□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Als2Q920R0 1651 aa10.64□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Rwdd1Q9CQK7 243 aa10.63□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Chmp5Q9D7S9 219 aa10.62□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Ncapd2Q8K2Z4 1392 aa10.62□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Rbm25B2RY56 838 aaKnown RBP10.62□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Terf2O35144 541 aa10.62□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Rrp7aQ9D1C9 280 aaKnown RBP10.62□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Mon2Q80TL7 1715 aa10.62□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Ppp2r3aB2RXC8 1150 aa10.61□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Ankrd50F7BE84 1390 aa10.61□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Srcin1Q9QWI6 1250 aa10.61□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Tnpo1Q8BFY9 898 aaKnown RBP10.6□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Cps1Q8C196 1500 aa10.6□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Adamtsl3G3UXC7 1706 aa10.6□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Topaz1E5FYH1 1653 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Aplp1Q03157 653 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Mapk8ip3Q9ESN9 1337 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Mknk2Q8CDB0 459 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 CanxP35564 591 aaKnown RBP10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Pknox2Q8BG99 474 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Pnma3Q8JZW8 466 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 C5P06684 1680 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 Ptpn23Q6PB44 1692 aa10.59□□□□□ -0.71
Pcdh9-201ENSMUST00000068992 AampJ3QN89 436 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 KarsQ99MN1 595 aaKnown RBP10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Speer4f1Q9D5Q6 258 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Nup153E9Q3G8 1462 aaKnown RBP10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Tjp1P39447 1745 aaKnown RBP10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Arap3Q8R5G7 1538 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Casz1Q9CWL2 1761 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Pdcl3Q8BVF2 240 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Rnf123Q5XPI3 1314 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Ipo8Q7TMY7 1010 aa10.58□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Zranb1Q7M760 708 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Gtf2a1Q99PM3 378 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Znf692Q3U381 531 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Irf5P56477 497 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Ripk4Q9ERK0 786 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Nsd3Q6P2L6 1439 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Ercc6l2Q9JIM3 1537 aa10.57□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Ube2uB1AUC4 352 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Zdhhc9P59268 364 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Parp14Q2EMV9 1817 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Wnk3Q80XP9 1757 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Gemin5Q8BX17 1502 aaKnown RBP10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Mcm4P49717 862 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Brd1E9PZ26 1189 aaKnown RBP10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Tbc1d30Q69ZT9 766 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Apbb1Q9QXJ1 710 aa10.56□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 CastP51125 788 aa10.55□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Trim58Q5NCC9 485 aa10.55□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 FanciQ8K368 1330 aa10.55□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Ralbp1Q62172 648 aa10.55□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Kif20aP97329 887 aa10.54□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 C3P01027 1663 aa10.54□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Gm6268A2A3U9 297 aa10.54□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Yeats2Q3TUF7 1407 aa10.54□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Msh6P54276 1358 aaKnown RBP10.54□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Cald1E9QA15 768 aaKnown RBP10.53□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Usp40Q8BWR4 1235 aa10.53□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Uhrf1bp1lA2RSJ4 1457 aa10.52□□□□□ -0.72
Pcdh9-201ENSMUST00000068992 Gm10093D3YYI8 482 aa10.52□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Dhx16G3X8X0 1044 aaKnown RBP10.52□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Hdac1O09106 482 aaKnown RBP10.52□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Trim28Q62318 834 aa10.52□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Ythdc2B2RR83 1445 aaKnown RBP10.52□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 IghaA0A0A6YXW6 389 aa10.51□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Apaf1O88879 1249 aa10.51□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Phf14Q9D4H9 881 aa10.51□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Col16a1Q8BLX7 1580 aa10.51□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Gm9992B2RWK3 458 aa10.51□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Unc93aQ710D3 458 aa10.51□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Kdm4cQ8VCD7 1054 aa10.5□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 4930567H17RikQ3V0K5 233 aa10.5□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Ssh1Q76I79 1042 aa10.5□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 MarsQ68FL6 902 aaKnown RBP10.5□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Igf1rQ60751 1373 aa10.5□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Zbtb4Q5F293 982 aa10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Golga2Q921M4 999 aa10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Kif24Q6NWW5 1356 aa10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Rabep1O35551 862 aa10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Hs1bp3Q3TC93 395 aa10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Ppm1gQ61074 542 aa10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Pelp1Q9DBD5 1123 aaKnown RBP10.49□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Paxip1Q6NZQ4 1056 aa10.48□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Slit3Q9WVB4 1523 aa10.48□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Maco1Q7TQE6 664 aaKnown RBP10.47□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Abcc10Q8R4P9 1501 aa10.47□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Neurod2Q62414 383 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms