RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Pik3r4Q8VD65 1358 aa20.74■□□□□ 0.91
Trim50-201ENSMUST00000065785 Neurod2Q62414 383 aa20.74■□□□□ 0.91
Trim50-201ENSMUST00000065785 Arap3Q8R5G7 1538 aa20.73■□□□□ 0.91
Trim50-201ENSMUST00000065785 PtpruB1AUH1 1446 aa20.72■□□□□ 0.91
Trim50-201ENSMUST00000065785 Ciz1Q8VEH2 845 aa20.71■□□□□ 0.91
Trim50-201ENSMUST00000065785 Thsd7aQ69ZU6 1645 aa20.71■□□□□ 0.91
Trim50-201ENSMUST00000065785 Idi2Q8BFZ6 227 aa20.71■□□□□ 0.91
Trim50-201ENSMUST00000065785 U2af1Q9D883 239 aaKnown RBP20.71■□□□□ 0.91
Trim50-201ENSMUST00000065785 Usp32F8VPZ3 1604 aa20.7■□□□□ 0.9
Trim50-201ENSMUST00000065785 Liat1Q810M6 228 aa20.69■□□□□ 0.9
Trim50-201ENSMUST00000065785 Sirt1Q923E4 737 aa20.69■□□□□ 0.9
Trim50-201ENSMUST00000065785 Zmym3Q9JLM4 1370 aa20.68■□□□□ 0.9
Trim50-201ENSMUST00000065785 Trim28Q62318 834 aa20.68■□□□□ 0.9
Trim50-201ENSMUST00000065785 Pip4k2bQ80XI4 416 aa20.67■□□□□ 0.9
Trim50-201ENSMUST00000065785 Rapgef3Q8VCC8 918 aa20.64■□□□□ 0.9
Trim50-201ENSMUST00000065785 Kif1aP33173 1695 aa20.64■□□□□ 0.9
Trim50-201ENSMUST00000065785 Pik3c2bE9QAN8 1632 aa20.64■□□□□ 0.9
Trim50-201ENSMUST00000065785 Fchsd2Q3USJ8 740 aa20.64■□□□□ 0.89
Trim50-201ENSMUST00000065785 Apaf1O88879 1249 aa20.63■□□□□ 0.89
Trim50-201ENSMUST00000065785 Uhrf1bp1B2KF50 1429 aa20.63■□□□□ 0.89
Trim50-201ENSMUST00000065785 Slc4a3P16283 1227 aa20.62■□□□□ 0.89
Trim50-201ENSMUST00000065785 Myt1Q8CFC2 1127 aa20.62■□□□□ 0.89
Trim50-201ENSMUST00000065785 Tnrc6bQ8BKI2 1810 aaKnown RBP20.62■□□□□ 0.89
Trim50-201ENSMUST00000065785 CatipB9EKE5 520 aa20.62■□□□□ 0.89
Trim50-201ENSMUST00000065785 Hoxb7P09024 217 aa20.62■□□□□ 0.89
Trim50-201ENSMUST00000065785 Kdm2bQ6P1G2 1309 aa20.61■□□□□ 0.89
Trim50-201ENSMUST00000065785 AampJ3QN89 436 aa20.61■□□□□ 0.89
Trim50-201ENSMUST00000065785 PaskQ8CEE6 1383 aa20.61■□□□□ 0.89
Trim50-201ENSMUST00000065785 Ppp1r15aP17564 657 aa20.6■□□□□ 0.89
Trim50-201ENSMUST00000065785 Mapk8ip3Q9ESN9 1337 aa20.59■□□□□ 0.89
Trim50-201ENSMUST00000065785 Cavin4A2AMM0 362 aa20.59■□□□□ 0.89
Trim50-201ENSMUST00000065785 Gas2l2Q5SSG4 860 aa20.59■□□□□ 0.89
Trim50-201ENSMUST00000065785 Atxn3Q9CVD2 355 aa20.59■□□□□ 0.89
Trim50-201ENSMUST00000065785 HnrnpmQ9D0E1 729 aaKnown RBP20.59■□□□□ 0.89
Trim50-201ENSMUST00000065785 Znf335A2A5K6 1337 aa20.58■□□□□ 0.89
Trim50-201ENSMUST00000065785 Dusp27Q148W8 1138 aa20.58■□□□□ 0.89
Trim50-201ENSMUST00000065785 Rtl5Q5DTT4 599 aa20.58■□□□□ 0.89
Trim50-201ENSMUST00000065785 Slc12a5Q91V14 1138 aa20.57■□□□□ 0.88
Trim50-201ENSMUST00000065785 Gli3Q61602 1583 aa20.56■□□□□ 0.88
Trim50-201ENSMUST00000065785 Fam135bQ9DAI6 1403 aa20.56■□□□□ 0.88
Trim50-201ENSMUST00000065785 Trim58Q5NCC9 485 aa20.55■□□□□ 0.88
Trim50-201ENSMUST00000065785 Ccar1Q8CH18 1146 aaKnown RBP20.55■□□□□ 0.88
Trim50-201ENSMUST00000065785 Rreb1Q3UH06 1700 aaKnown RBP20.55■□□□□ 0.88
Trim50-201ENSMUST00000065785 Znf521Q6KAS7 1311 aa20.55■□□□□ 0.88
Trim50-201ENSMUST00000065785 Kif20bQ80WE4 1774 aaKnown RBP20.55■□□□□ 0.88
Trim50-201ENSMUST00000065785 N4bp2F8VQG7 1678 aaKnown RBP20.54■□□□□ 0.88
Trim50-201ENSMUST00000065785 Mdc1Q5PSV9 1707 aa20.54■□□□□ 0.88
Trim50-201ENSMUST00000065785 Q3UJC8 639 aa20.54■□□□□ 0.88
Trim50-201ENSMUST00000065785 Col18a1P39061 1774 aa20.53■□□□□ 0.88
Trim50-201ENSMUST00000065785 Unc13bQ9Z1N9 1602 aa20.53■□□□□ 0.88
Trim50-201ENSMUST00000065785 Tns3Q5SSZ5 1440 aa20.53■□□□□ 0.88
Trim50-201ENSMUST00000065785 Apbb1Q9QXJ1 710 aa20.53■□□□□ 0.88
Trim50-201ENSMUST00000065785 Astn2Q80Z10 1352 aa20.52■□□□□ 0.88
Trim50-201ENSMUST00000065785 Ksr2Q3UVC0 959 aa20.52■□□□□ 0.88
Trim50-201ENSMUST00000065785 Q4VA45 678 aa20.52■□□□□ 0.88
Trim50-201ENSMUST00000065785 Atp7bQ64446 1462 aa20.51■□□□□ 0.87
Trim50-201ENSMUST00000065785 Znf316Q6PGE4 1016 aa20.5■□□□□ 0.87
Trim50-201ENSMUST00000065785 PalmQ9Z0P4 383 aa20.5■□□□□ 0.87
Trim50-201ENSMUST00000065785 Ttc21aQ8C0S4 1314 aa20.5■□□□□ 0.87
Trim50-201ENSMUST00000065785 Swt1Q9DBQ9 907 aa20.49■□□□□ 0.87
Trim50-201ENSMUST00000065785 D430041D05RikF6ZGR6 1678 aa20.49■□□□□ 0.87
Trim50-201ENSMUST00000065785 Col14a1Q80X19 1797 aa20.48■□□□□ 0.87
Trim50-201ENSMUST00000065785 Birc3O08863 600 aa20.48■□□□□ 0.87
Trim50-201ENSMUST00000065785 Pak3Q61036 559 aa20.48■□□□□ 0.87
Trim50-201ENSMUST00000065785 Egfem1Q8C088 590 aa20.48■□□□□ 0.87
Trim50-201ENSMUST00000065785 Spef2Q8C9J3 1734 aa20.48■□□□□ 0.87
Trim50-201ENSMUST00000065785 Ankrd50F7BE84 1390 aa20.47■□□□□ 0.87
Trim50-201ENSMUST00000065785 CemipQ8BI06 1361 aa20.47■□□□□ 0.87
Trim50-201ENSMUST00000065785 Ttll13A4Q9F6 804 aa20.47■□□□□ 0.87
Trim50-201ENSMUST00000065785 Smc5Q8CG46 1101 aaKnown RBP20.46■□□□□ 0.87
Trim50-201ENSMUST00000065785 Mon2Q80TL7 1715 aa20.46■□□□□ 0.87
Trim50-201ENSMUST00000065785 Rsph6aQ8CDR2 708 aa20.46■□□□□ 0.87
Trim50-201ENSMUST00000065785 Uhrf1bp1lA2RSJ4 1457 aa20.45■□□□□ 0.86
Trim50-201ENSMUST00000065785 NalcnQ8BXR5 1738 aa20.45■□□□□ 0.86
Trim50-201ENSMUST00000065785 C5P06684 1680 aa20.45■□□□□ 0.86
Trim50-201ENSMUST00000065785 Als2Q920R0 1651 aa20.45■□□□□ 0.86
Trim50-201ENSMUST00000065785 Chd4Q6PDQ2 1915 aaKnown RBP20.44■□□□□ 0.86
Trim50-201ENSMUST00000065785 NudcO35685 332 aaKnown RBP20.44■□□□□ 0.86
Trim50-201ENSMUST00000065785 CastP51125 788 aa20.44■□□□□ 0.86
Trim50-201ENSMUST00000065785 Pank1Q8K4K6 548 aa20.44■□□□□ 0.86
Trim50-201ENSMUST00000065785 Abcc10Q8R4P9 1501 aa20.44■□□□□ 0.86
Trim50-201ENSMUST00000065785 EspnQ9ET47 871 aa20.43■□□□□ 0.86
Trim50-201ENSMUST00000065785 Ccdc171E9Q1U1 1324 aa20.43■□□□□ 0.86
Trim50-201ENSMUST00000065785 Tspyl2Q7TQI8 677 aa20.43■□□□□ 0.86
Trim50-201ENSMUST00000065785 Tmem94Q7TSH8 1360 aa20.43■□□□□ 0.86
Trim50-201ENSMUST00000065785 Cdk12Q14AX6 1484 aaKnown RBP20.41■□□□□ 0.86
Trim50-201ENSMUST00000065785 C3P01027 1663 aa20.4■□□□□ 0.86
Trim50-201ENSMUST00000065785 Rbm25B2RY56 838 aaKnown RBP20.39■□□□□ 0.86
Trim50-201ENSMUST00000065785 Scaf1Q5U4C3 1256 aaKnown RBP20.39■□□□□ 0.86
Trim50-201ENSMUST00000065785 Chmp5Q9D7S9 219 aa20.39■□□□□ 0.85
Trim50-201ENSMUST00000065785 Col16a1Q8BLX7 1580 aa20.38■□□□□ 0.85
Trim50-201ENSMUST00000065785 Zfp777B9EKF4 885 aa20.38■□□□□ 0.85
Trim50-201ENSMUST00000065785 Amigo3Q8C2S7 508 aa20.38■□□□□ 0.85
Trim50-201ENSMUST00000065785 Slain2Q8CI08 581 aa20.38■□□□□ 0.85
Trim50-201ENSMUST00000065785 Pik3c2aQ61194 1686 aa20.37■□□□□ 0.85
Trim50-201ENSMUST00000065785 Polr3glQ8R0C0 218 aa20.37■□□□□ 0.85
Trim50-201ENSMUST00000065785 Duxf3A0A0N4SV92 674 aa20.35■□□□□ 0.85
Trim50-201ENSMUST00000065785 Iqcf3Q9D498 203 aa20.35■□□□□ 0.85
Trim50-201ENSMUST00000065785 Rad17Q6NXW6 688 aa20.34■□□□□ 0.85
Trim50-201ENSMUST00000065785 Ipo9Q91YE6 1041 aa20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms