RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Atf3Q60765 181 aa20.33■□□□□ 0.85
Trim3-201ENSMUST00000057525 Mak16Q8BGS0 296 aaKnown RBP20.33■□□□□ 0.85
Trim3-201ENSMUST00000057525 U2af1Q9D883 239 aaKnown RBP20.33■□□□□ 0.85
Trim3-201ENSMUST00000057525 GsdmaQ9EST1 446 aa20.33■□□□□ 0.85
Trim3-201ENSMUST00000057525 Gm21190A0A0G2JGJ6 266 aa20.33■□□□□ 0.84
Trim3-201ENSMUST00000057525 Tsen2Q6P7W5 460 aa20.33■□□□□ 0.84
Trim3-201ENSMUST00000057525 Nckap5lQ6GQX2 1323 aa20.32■□□□□ 0.84
Trim3-201ENSMUST00000057525 KdrP35918 1367 aa20.32■□□□□ 0.84
Trim3-201ENSMUST00000057525 Frmpd2A0A140LI67 1392 aa20.3■□□□□ 0.84
Trim3-201ENSMUST00000057525 Cabp4Q8VHC5 271 aa20.3■□□□□ 0.84
Trim3-201ENSMUST00000057525 Tmem2Q5FWI3 1383 aa20.29■□□□□ 0.84
Trim3-201ENSMUST00000057525 Dennd6aQ8BH65 605 aa20.28■□□□□ 0.84
Trim3-201ENSMUST00000057525 Fyb1O35601 819 aa20.28■□□□□ 0.84
Trim3-201ENSMUST00000057525 Apaf1O88879 1249 aa20.28■□□□□ 0.84
Trim3-201ENSMUST00000057525 Plin1Q8CGN5 517 aa20.28■□□□□ 0.84
Trim3-201ENSMUST00000057525 Slc12a5Q91V14 1138 aa20.28■□□□□ 0.84
Trim3-201ENSMUST00000057525 Golga2Q921M4 999 aa20.28■□□□□ 0.84
Trim3-201ENSMUST00000057525 Neurod2Q62414 383 aa20.27■□□□□ 0.84
Trim3-201ENSMUST00000057525 Farp2Q91VS8 1065 aa20.27■□□□□ 0.83
Trim3-201ENSMUST00000057525 Anks4bQ8K3X6 423 aa20.26■□□□□ 0.83
Trim3-201ENSMUST00000057525 Col18a1P39061 1774 aa20.26■□□□□ 0.83
Trim3-201ENSMUST00000057525 Atf7ipQ7TT18 1306 aa20.25■□□□□ 0.83
Trim3-201ENSMUST00000057525 Zfp444Q3TDV8 331 aaKnown RBP20.25■□□□□ 0.83
Trim3-201ENSMUST00000057525 Nlgn1Q99K10 843 aa20.25■□□□□ 0.83
Trim3-201ENSMUST00000057525 Znf335A2A5K6 1337 aa20.23■□□□□ 0.83
Trim3-201ENSMUST00000057525 Astn2Q80Z10 1352 aa20.22■□□□□ 0.83
Trim3-201ENSMUST00000057525 Wdr17E9Q271 1322 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 Unc13bQ9Z1N9 1602 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 Mon2Q80TL7 1715 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 PalmQ9Z0P4 383 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 Uhrf1bp1lA2RSJ4 1457 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 Pik3c2aQ61194 1686 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 Speer4f1Q9D5Q6 258 aa20.21■□□□□ 0.83
Trim3-201ENSMUST00000057525 Brinp3Q499E0 766 aa20.2■□□□□ 0.82
Trim3-201ENSMUST00000057525 Trim28Q62318 834 aa20.2■□□□□ 0.82
Trim3-201ENSMUST00000057525 Gli3Q61602 1583 aa20.19■□□□□ 0.82
Trim3-201ENSMUST00000057525 Mcm10Q0VBD2 885 aa20.19■□□□□ 0.82
Trim3-201ENSMUST00000057525 Kcna6Q61923 529 aa20.19■□□□□ 0.82
Trim3-201ENSMUST00000057525 Usp19Q3UJD6 1360 aa20.18■□□□□ 0.82
Trim3-201ENSMUST00000057525 Tmem132eQ6IEE6 982 aa20.18■□□□□ 0.82
Trim3-201ENSMUST00000057525 FancaQ9JL70 1439 aa20.18■□□□□ 0.82
Trim3-201ENSMUST00000057525 Kif1aP33173 1695 aa20.17■□□□□ 0.82
Trim3-201ENSMUST00000057525 MpripP97434 1024 aa20.16■□□□□ 0.82
Trim3-201ENSMUST00000057525 Ppp1r15aP17564 657 aa20.15■□□□□ 0.82
Trim3-201ENSMUST00000057525 TimelessQ9R1X4 1197 aa20.15■□□□□ 0.82
Trim3-201ENSMUST00000057525 Bcl11bQ99PV8 884 aa20.15■□□□□ 0.82
Trim3-201ENSMUST00000057525 Eif4a2P10630 407 aa20.14■□□□□ 0.81
Trim3-201ENSMUST00000057525 Rsph6aQ8CDR2 708 aa20.14■□□□□ 0.81
Trim3-201ENSMUST00000057525 Atxn3Q9CVD2 355 aa20.14■□□□□ 0.81
Trim3-201ENSMUST00000057525 Cdk12Q14AX6 1484 aaKnown RBP20.14■□□□□ 0.81
Trim3-201ENSMUST00000057525 Dixdc1Q80Y83 711 aa20.13■□□□□ 0.81
Trim3-201ENSMUST00000057525 Uspl1Q3ULM6 1089 aa20.13■□□□□ 0.81
Trim3-201ENSMUST00000057525 Col16a1Q8BLX7 1580 aa20.12■□□□□ 0.81
Trim3-201ENSMUST00000057525 Ccne1Q61457 408 aa20.12■□□□□ 0.81
Trim3-201ENSMUST00000057525 Hoxb7P09024 217 aa20.11■□□□□ 0.81
Trim3-201ENSMUST00000057525 Dzip1Q8BMD2 852 aa20.11■□□□□ 0.81
Trim3-201ENSMUST00000057525 Senp3Q9EP97 568 aaKnown RBP20.11■□□□□ 0.81
Trim3-201ENSMUST00000057525 CemipQ8BI06 1361 aa20.11■□□□□ 0.81
Trim3-201ENSMUST00000057525 Mapk8ip3Q9ESN9 1337 aa20.1■□□□□ 0.81
Trim3-201ENSMUST00000057525 Camta1A2A891 1682 aa20.1■□□□□ 0.81
Trim3-201ENSMUST00000057525 Map2P20357 1828 aa20.1■□□□□ 0.81
Trim3-201ENSMUST00000057525 L3mbtl2P59178 703 aa20.1■□□□□ 0.81
Trim3-201ENSMUST00000057525 Map4k4P97820 1233 aaKnown RBP20.09■□□□□ 0.81
Trim3-201ENSMUST00000057525 Dnajc10Q9DC23 793 aa20.09■□□□□ 0.81
Trim3-201ENSMUST00000057525 Ubr1O70481 1757 aa20.09■□□□□ 0.81
Trim3-201ENSMUST00000057525 TatQ8QZR1 454 aa20.09■□□□□ 0.81
Trim3-201ENSMUST00000057525 Gas2l2Q5SSG4 860 aa20.08■□□□□ 0.8
Trim3-201ENSMUST00000057525 Gimap6Q8K349 305 aa20.08■□□□□ 0.8
Trim3-201ENSMUST00000057525 Acsbg1Q99PU5 721 aa20.08■□□□□ 0.8
Trim3-201ENSMUST00000057525 Parp14Q2EMV9 1817 aa20.07■□□□□ 0.8
Trim3-201ENSMUST00000057525 Hoxc9P09633 260 aa20.06■□□□□ 0.8
Trim3-201ENSMUST00000057525 Ncapd2Q8K2Z4 1392 aa20.06■□□□□ 0.8
Trim3-201ENSMUST00000057525 Dusp27Q148W8 1138 aa20.06■□□□□ 0.8
Trim3-201ENSMUST00000057525 Ccdc30Q8BVF4 654 aa20.06■□□□□ 0.8
Trim3-201ENSMUST00000057525 Ttll13A4Q9F6 804 aa20.05■□□□□ 0.8
Trim3-201ENSMUST00000057525 Cabp2Q9JLK4 216 aa20.05■□□□□ 0.8
Trim3-201ENSMUST00000057525 Kif24Q6NWW5 1356 aa20.04■□□□□ 0.8
Trim3-201ENSMUST00000057525 PaskQ8CEE6 1383 aa20.04■□□□□ 0.8
Trim3-201ENSMUST00000057525 Ncoa4Q5U4H9 625 aa20.04■□□□□ 0.8
Trim3-201ENSMUST00000057525 Smim5Q8BT42 78 aa20.03■□□□□ 0.8
Trim3-201ENSMUST00000057525 Trim26Q99PN3 545 aa20.03■□□□□ 0.8
Trim3-201ENSMUST00000057525 Eya1P97767 591 aa20.03■□□□□ 0.8
Trim3-201ENSMUST00000057525 Q4VA45 678 aa20.02■□□□□ 0.8
Trim3-201ENSMUST00000057525 Gimap5Q8BWF2 308 aa20.02■□□□□ 0.79
Trim3-201ENSMUST00000057525 Erbb3Q61526 1339 aa20.02■□□□□ 0.79
Trim3-201ENSMUST00000057525 Gm21698A0A087WQP8 267 aa20.01■□□□□ 0.79
Trim3-201ENSMUST00000057525 Gm21671G3UY31 267 aa20.01■□□□□ 0.79
Trim3-201ENSMUST00000057525 Wnk3Q80XP9 1757 aa20.01■□□□□ 0.79
Trim3-201ENSMUST00000057525 TnikP83510 1323 aa20.01■□□□□ 0.79
Trim3-201ENSMUST00000057525 Tnnt3Q9QZ47 272 aa20■□□□□ 0.79
Trim3-201ENSMUST00000057525 Larp1bA0A0A6YXJ7 370 aaKnown RBP20■□□□□ 0.79
Trim3-201ENSMUST00000057525 Polr3glQ8R0C0 218 aa20■□□□□ 0.79
Trim3-201ENSMUST00000057525 Fmnl2A2APV2 1086 aa19.99■□□□□ 0.79
Trim3-201ENSMUST00000057525 Kcnh5Q920E3 988 aa19.99■□□□□ 0.79
Trim3-201ENSMUST00000057525 Apbb1Q9QXJ1 710 aa19.99■□□□□ 0.79
Trim3-201ENSMUST00000057525 Cavin4A2AMM0 362 aa19.97■□□□□ 0.79
Trim3-201ENSMUST00000057525 Rangap1P46061 589 aaKnown RBP19.97■□□□□ 0.79
Trim3-201ENSMUST00000057525 Ano8Q6PB70 1060 aa19.97■□□□□ 0.79
Trim3-201ENSMUST00000057525 Amotl2Q8K371 772 aa19.97■□□□□ 0.79
Trim3-201ENSMUST00000057525 Txnrd1Q9JMH6 613 aa19.97■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms