RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ipo4Q8VI75 1082 aa12.09□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 ShprhQ7TPQ3 1674 aa12.09□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Usp19Q3UJD6 1360 aa12.08□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Kiaa1107Q80TK0 1369 aa12.08□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Ric3Q8BPM6 367 aa12.08□□□□□ -0.47
Pcdh1-201ENSMUST00000057185 Asxl2Q8BZ32 1370 aa12.08□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Lmod3E9QA62 571 aa12.08□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Nos1Q9Z0J4 1429 aa12.08□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 AU019823E9PUQ3 292 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Eif4g2Q62448 906 aaKnown RBP12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Slc12a5Q91V14 1138 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q4VA45 678 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Cabp2Q9JLK4 216 aa12.07□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Hecw1Q8K4P8 1604 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Lrrc7Q80TE7 1490 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Rtf1A2AQ19 715 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Rtn4Q99P72 1162 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 P2rx7Q9Z1M0 595 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Setd1aE9PYH6 1716 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Catsper2A2ARP9 588 aa12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q3TQI7 289 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 IbtkQ6ZPR6 1352 aaKnown RBP12.06□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Stk31Q99MW1 1018 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 InsrP15208 1372 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 NinlQ6ZQ12 1394 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 FanciQ8K368 1330 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 PalldQ9ET54 1408 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Kidins220E9Q9B7 1793 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Pola1P33609 1465 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Mcm10Q0VBD2 885 aa12.05□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Abca6Q8K441 1624 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 CastP51125 788 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 MpripP97434 1024 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Dnajc5gQ8C632 165 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Zfyve16Q80U44 1528 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Cdc37l1Q9CZP7 335 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q9D2X8 372 aa12.04□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Neurl4Q5NCX5 1563 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Gnai1B2RSH2 354 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Casq1O09165 405 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Plekhm2Q80TQ5 1018 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Gnai3Q9DC51 354 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Prrc2bQ7TPM1 1486 aaKnown RBP12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Q3UPC7 1272 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 HnrnpmQ9D0E1 729 aaKnown RBP12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Cyb5rlB1AS42 316 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Mcm4P49717 862 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Rsph4aQ8BYM7 716 aa12.03□□□□□ -0.48
Pcdh1-201ENSMUST00000057185 Tbc1d32Q3URV1 1296 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cabp4Q8VHC5 271 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cfap65Q3V0B4 1847 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 AampJ3QN89 436 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 AnkarA2RT91 1465 aa12.02□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Kdm5aQ3UXZ9 1690 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Ccdc171E9Q1U1 1324 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Robo2Q7TPD3 1470 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pcmtd1P59913 357 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Scaf11E9PZM7 1456 aaKnown RBP12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Paxip1Q6NZQ4 1056 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Nol12Q8BG17 217 aa12.01□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Phlpp2Q8BXA7 1320 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Phactr2B1AVP0 632 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Terf2O35144 541 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Smarca5Q91ZW3 1051 aaKnown RBP12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Klhdc4Q921I2 584 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Yeats2Q3TUF7 1407 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pdcl3Q8BVF2 240 aa12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 CarsQ9ER72 831 aaKnown RBP12□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pdcd11Q6NS46 1862 aaKnown RBP11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Ggnbp2Q5SV77 696 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pknox2Q8BG99 474 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Ciz1Q8VEH2 845 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cetn4Q8K4K1 168 aa11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Xrn1P97789 1719 aaKnown RBP11.99□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Skint5A7XUY5 1461 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Cgnl1Q6AW69 1298 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Casc1Q6TDU8 730 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Pip4k2bQ80XI4 416 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Talpid3E9PV87 1520 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Gm21190A0A0G2JGJ6 266 aa11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Rrp12Q6P5B0 1295 aaKnown RBP11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Rnf214Q8BFU3 668 aaKnown RBP11.98□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 4933402E13RikQ9D4D2 429 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 MvpQ9EQK5 861 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Kiaa1210E9Q0C6 1637 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Aldh1l1Q8R0Y6 902 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Tbc1d9Q3UYK3 1264 aa11.97□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 MccE9PWI3 1003 aa11.96□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Uggt2E9Q4X2 1504 aa11.96□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 PogkQ80TC5 607 aa11.96□□□□□ -0.49
Pcdh1-201ENSMUST00000057185 Gprasp1Q5U4C1 1347 aa11.96□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Tmc1Q8R4P5 757 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Rims1Q99NE5 1463 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Hmox1P14901 289 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Slc4a10Q5DTL9 1118 aa11.95□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Efcab6Q6P1E8 1516 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ttc41Q692V3 1318 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Brpf1B2RRD7 1212 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Phf14Q9D4H9 881 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Iqgap3F8VQ29 1632 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms