RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Iqsec2Q5DU25 1478 aa20.42■□□□□ 0.86
Ckap4-201ENSMUST00000053871 AglF8VPN4 1532 aa20.41■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Akap12Q9WTQ5 1684 aa20.41■□□□□ 0.86
Ckap4-201ENSMUST00000053871 KdrP35918 1367 aa20.4■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Cavin4A2AMM0 362 aa20.4■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Prdm2A2A7B5 1709 aaKnown RBP20.39■□□□□ 0.86
Ckap4-201ENSMUST00000053871 PrkcshO08795 521 aa20.39■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Plxnc1Q9QZC2 1574 aa20.38■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Ppp2r3aB2RXC8 1150 aa20.38■□□□□ 0.85
Ckap4-201ENSMUST00000053871 CastP51125 788 aa20.38■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Mre11Q61216 706 aa20.38■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Maco1Q7TQE6 664 aaKnown RBP20.38■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Txndc2Q6P902 515 aa20.37■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Hfm1D3Z4R1 1434 aa20.36■□□□□ 0.85
Ckap4-201ENSMUST00000053871 AU019823E9PUQ3 292 aa20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 G3bp1P97855 465 aaKnown RBP20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Fam135bQ9DAI6 1403 aa20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Mfap1aC0HKD8 439 aaKnown RBP20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Mfap1bC0HKD9 439 aaKnown RBP20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Mcm10Q0VBD2 885 aa20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Psme1P97371 249 aa20.35■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Ahdc1Q6PAL7 1594 aaKnown RBP20.33■□□□□ 0.85
Ckap4-201ENSMUST00000053871 U2surpQ6NV83 1029 aaKnown RBP20.33■□□□□ 0.85
Ckap4-201ENSMUST00000053871 NgefQ8CHT1 710 aa20.33■□□□□ 0.85
Ckap4-201ENSMUST00000053871 Eif2ak4Q9QZ05 1648 aa20.33■□□□□ 0.85
Ckap4-201ENSMUST00000053871 PtprmP28828 1452 aa20.33■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Arhgap23Q69ZH9 1483 aa20.32■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Swt1Q9DBQ9 907 aa20.32■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Nrxn1Q9CS84 1514 aa20.32■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Kiaa0556Q8C753 1610 aa20.32■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Zmym3Q9JLM4 1370 aa20.32■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Aplp1Q03157 653 aa20.31■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Ankrd50F7BE84 1390 aa20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Ppp1r9bQ6R891 817 aaKnown RBP20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Cul9Q80TT8 1865 aa20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Map3k19E9Q3S4 1311 aa20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 FanciQ8K368 1330 aa20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 1700019A02RikA0A087WPV9 146 aa20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Tnpo1Q8BFY9 898 aaKnown RBP20.3■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Qser1A2BIE1 1698 aa20.29■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Cabp2Q9JLK4 216 aa20.28■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Ift172Q6VH22 1749 aa20.28■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Ttc37F8VPK0 1563 aa20.28■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Spryd3E9Q9B3 442 aa20.28■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Q4VA45 678 aa20.27■□□□□ 0.84
Ckap4-201ENSMUST00000053871 Cdc37l1Q9CZP7 335 aa20.26■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Adgrl3Q80TS3 1537 aa20.26■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Ttc21aQ8C0S4 1314 aa20.26■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Naip7Q9JIB3 1402 aa20.25■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Adgrl1Q80TR1 1466 aa20.25■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Pibf1E9Q6K3 756 aa20.24■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Atl3Q91YH5 541 aa20.24■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Klhdc4Q921I2 584 aa20.24■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Plekhm2Q80TQ5 1018 aa20.24■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Q3UPC7 1272 aa20.23■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Cog6Q8R3I3 657 aa20.22■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Usp16Q99LG0 825 aa20.22■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Sptbn5F6UCX4 1208 aa20.22■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Kif18aQ91WD7 886 aa20.21■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Adamts7Q68SA9 1657 aa20.21■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Ccdc9Q8VC31 543 aaKnown RBP20.21■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Ciz1Q8VEH2 845 aa20.21■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Trim28Q62318 834 aa20.21■□□□□ 0.83
Ckap4-201ENSMUST00000053871 HnrnpmQ9D0E1 729 aaKnown RBP20.21■□□□□ 0.83
Ckap4-201ENSMUST00000053871 Med14A2ABV5 1459 aaKnown RBP20.2■□□□□ 0.82
Ckap4-201ENSMUST00000053871 MpripP97434 1024 aa20.2■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Ercc6l2Q9JIM3 1537 aa20.2■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Uhrf1bp1lA2RSJ4 1457 aa20.19■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Synj2Q9D2G5 1434 aa20.19■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Ccdc171E9Q1U1 1324 aa20.19■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Sox12Q04890 314 aa20.19■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Fchsd2Q3USJ8 740 aa20.19■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Abca14E9Q8F8 1683 aa20.18■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Rabep1O35551 862 aa20.18■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Map7O88735 730 aa20.18■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Vamp4O70480 141 aa20.18■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Ppp1r15aP17564 657 aa20.18■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Irx3P81067 507 aa20.18■□□□□ 0.82
Ckap4-201ENSMUST00000053871 SkilQ60665 675 aa20.17■□□□□ 0.82
Ckap4-201ENSMUST00000053871 AampJ3QN89 436 aa20.17■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Tbc1d32Q3URV1 1296 aa20.17■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Hecw2Q6I6G8 1578 aa20.17■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Phlpp2Q8BXA7 1320 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Nsd3Q6P2L6 1439 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 PaskQ8CEE6 1383 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Tmc1Q8R4P5 757 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Kif13aQ9EQW7 1749 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Arhgef28P97433 1693 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 GorabQ8BRM2 368 aa20.16■□□□□ 0.82
Ckap4-201ENSMUST00000053871 IghaA0A0A6YXW6 389 aa20.15■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Gnai1B2RSH2 354 aa20.15■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Gnai3Q9DC51 354 aa20.15■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Aldh1l1Q8R0Y6 902 aa20.14■□□□□ 0.82
Ckap4-201ENSMUST00000053871 Pik3r4Q8VD65 1358 aa20.14■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Rsph6aQ8CDR2 708 aa20.14■□□□□ 0.81
Ckap4-201ENSMUST00000053871 CltcQ68FD5 1675 aaKnown RBP20.14■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Rsph4aQ8BYM7 716 aa20.13■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Safb2Q80YR5 991 aaKnown RBP20.13■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Ncbp3Q8BZR9 615 aaKnown RBP20.13■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Dnajc5gQ8C632 165 aa20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms