RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Dmrt2Q8BG36 561 aa29.23■■■□□ 2.27
Ssbp4-201ENSMUST00000049908 Acsbg1Q99PU5 721 aa29.23■■■□□ 2.27
Ssbp4-201ENSMUST00000049908 Abca15E9PWH4 1668 aa29.21■■■□□ 2.27
Ssbp4-201ENSMUST00000049908 Ddx54Q8K4L0 874 aaKnown RBP29.2■■■□□ 2.26
Ssbp4-201ENSMUST00000049908 TimelessQ9R1X4 1197 aa29.18■■■□□ 2.26
Ssbp4-201ENSMUST00000049908 Znf335A2A5K6 1337 aa29.16■■■□□ 2.26
Ssbp4-201ENSMUST00000049908 Sbno1Q689Z5 1390 aa29.16■■■□□ 2.26
Ssbp4-201ENSMUST00000049908 Zmym3Q9JLM4 1370 aa29.13■■■□□ 2.25
Ssbp4-201ENSMUST00000049908 Col16a1Q8BLX7 1580 aa29.12■■■□□ 2.25
Ssbp4-201ENSMUST00000049908 Frmpd2A0A140LI67 1392 aa29.1■■■□□ 2.25
Ssbp4-201ENSMUST00000049908 Cnga1P29974 684 aa29.1■■■□□ 2.25
Ssbp4-201ENSMUST00000049908 Cdhr2E9Q7P9 1308 aa29.09■■■□□ 2.25
Ssbp4-201ENSMUST00000049908 ZgpatQ8VDM1 511 aa29.09■■■□□ 2.25
Ssbp4-201ENSMUST00000049908 PaskQ8CEE6 1383 aa29.07■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 Gimap6Q8K349 305 aa29.07■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 Bcl9lQ67FY2 1494 aa29.07■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 NinlQ6ZQ12 1394 aa29.06■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 Dzip1Q8BMD2 852 aa29.05■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 Cwc22Q8C5N3 908 aaKnown RBP29.05■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 InhbeO08717 350 aa29.04■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 HdgfP51859 237 aaKnown RBP29.04■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 Sin3aQ60520 1274 aaKnown RBP29.02■■■□□ 2.24
Ssbp4-201ENSMUST00000049908 Ncoa4Q5U4H9 625 aa29.01■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Tet3Q8BG87 1668 aa29■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Kif16bB1AVY7 1312 aa29■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Nfat5Q9WV30 1534 aa28.99■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Eno4Q8C042 619 aa28.99■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Txnrd1Q9JMH6 613 aa28.99■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Nid2O88322 1403 aa28.97■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Rtl5Q5DTT4 599 aa28.96■■■□□ 2.23
Ssbp4-201ENSMUST00000049908 Psrc1Q9D0P7 329 aa28.94■■■□□ 2.22
Ssbp4-201ENSMUST00000049908 Ncapd2Q8K2Z4 1392 aa28.93■■■□□ 2.22
Ssbp4-201ENSMUST00000049908 Gm21698A0A087WQP8 267 aa28.89■■■□□ 2.22
Ssbp4-201ENSMUST00000049908 Gm21671G3UY31 267 aa28.89■■■□□ 2.22
Ssbp4-201ENSMUST00000049908 Aebp2Q9Z248 504 aaKnown RBP28.89■■■□□ 2.22
Ssbp4-201ENSMUST00000049908 Shank2Q80Z38 1476 aa28.89■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Gm21190A0A0G2JGJ6 266 aa28.88■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Dennd6aQ8BH65 605 aa28.88■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Astn2Q80Z10 1352 aa28.88■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Chd4Q6PDQ2 1915 aaKnown RBP28.88■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Slc4a1apE9PX68 744 aa28.87■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Nlgn1Q99K10 843 aa28.86■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Slc24a1Q91WD8 1130 aa28.85■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Kcnh5Q920E3 988 aa28.85■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Sf3b2Q3UJB0 878 aaKnown RBP28.84■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Tnrc6cQ3UHC0 1690 aaKnown RBP28.83■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Pard3Q99NH2 1333 aa28.83■■■□□ 2.21
Ssbp4-201ENSMUST00000049908 Card10P58660 1021 aa28.81■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Slx1bQ8BX32 270 aa28.81■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Cdk12Q14AX6 1484 aaKnown RBP28.8■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Sgsm1Q8BPQ7 1093 aa28.78■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 CemipQ8BI06 1361 aa28.78■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Nckap5lQ6GQX2 1323 aa28.78■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Fam184bQ0KK56 942 aa28.78■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 MpndQ3TV65 487 aa28.78■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Cabp4Q8VHC5 271 aa28.78■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Scaf1Q5U4C3 1256 aaKnown RBP28.77■■■□□ 2.2
Ssbp4-201ENSMUST00000049908 Ccdc129Q14B48 1034 aa28.76■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 TnrQ8BYI9 1358 aa28.75■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Mdc1Q5PSV9 1707 aa28.75■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Wdr66E9Q743 1299 aa28.75■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Ano8Q6PB70 1060 aa28.75■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Cypt1Q8CH20 168 aa28.75■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Amotl2Q8K371 772 aa28.74■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Dnajc10Q9DC23 793 aa28.74■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Fmnl2A2APV2 1086 aa28.73■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Cacna1sQ02789 1880 aa28.73■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Ubr1O70481 1757 aa28.73■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Prdm10Q3UTQ7 1184 aa28.72■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Zeb2Q9R0G7 1215 aa28.72■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 TatQ8QZR1 454 aa28.72■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Ltbp1Q8CG19 1712 aa28.71■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Plekhg5Q66T02 1073 aa28.71■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 PrxO55103 1391 aa28.7■■■□□ 2.19
Ssbp4-201ENSMUST00000049908 Tmf1B9EKI3 1091 aa28.7■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Fer1l6E0CZ42 1862 aa28.68■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Pm20d1Q8C165 503 aa28.67■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Pank3Q8R2W9 370 aa28.67■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Rgs17Q9QZB0 210 aa28.67■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Col22a1E9Q7P1 1613 aa28.67■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Scn7aB1AYL1 1681 aa28.66■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Map2P20357 1828 aa28.66■■■□□ 2.18
Ssbp4-201ENSMUST00000049908 Nol11Q8BJW5 723 aaKnown RBP28.64■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 FancaQ9JL70 1439 aa28.63■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 Robo1O89026 1612 aa28.62■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 ClspnQ80YR7 1315 aa28.61■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 Kat6bQ8BRB7 1872 aa28.61■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 Inpp5dQ9ES52 1191 aa28.6■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 RgmbQ7TQ33 436 aa28.59■■■□□ 2.17
Ssbp4-201ENSMUST00000049908 IbtkQ6ZPR6 1352 aaKnown RBP28.57■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Tnks1bp1P58871 1720 aa28.57■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Dcaf11Q91VU6 549 aa28.57■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Hoxb7P09024 217 aa28.56■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Smg6P61406 1418 aaKnown RBP28.55■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Birc3O08863 600 aa28.55■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Mast2Q60592 1734 aa28.54■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Tmem132eQ6IEE6 982 aa28.53■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Akap11E9Q777 1895 aa28.53■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 Nup153E9Q3G8 1462 aaKnown RBP28.52■■■□□ 2.16
Ssbp4-201ENSMUST00000049908 CrklP47941 303 aa28.52■■■□□ 2.16
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms