RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Bcl11bQ99PV8 884 aa11.75□□□□□ -0.53
Trim42-201ENSMUST00000035026 Mon2Q80TL7 1715 aa11.74□□□□□ -0.53
Trim42-201ENSMUST00000035026 Rtn4Q99P72 1162 aaKnown RBP11.74□□□□□ -0.53
Trim42-201ENSMUST00000035026 Sin3aQ60520 1274 aaKnown RBP11.74□□□□□ -0.53
Trim42-201ENSMUST00000035026 Wdr66E9Q743 1299 aa11.73□□□□□ -0.53
Trim42-201ENSMUST00000035026 Idi1P58044 227 aa11.73□□□□□ -0.53
Trim42-201ENSMUST00000035026 Cwc22Q8C5N3 908 aaKnown RBP11.73□□□□□ -0.53
Trim42-201ENSMUST00000035026 Tmem2Q5FWI3 1383 aa11.73□□□□□ -0.53
Trim42-201ENSMUST00000035026 KdrP35918 1367 aa11.72□□□□□ -0.53
Trim42-201ENSMUST00000035026 DccP70211 1447 aa11.72□□□□□ -0.53
Trim42-201ENSMUST00000035026 Igsf3Q6ZQA6 1194 aa11.72□□□□□ -0.53
Trim42-201ENSMUST00000035026 Kif1aP33173 1695 aa11.72□□□□□ -0.53
Trim42-201ENSMUST00000035026 Sox12Q04890 314 aa11.71□□□□□ -0.53
Trim42-201ENSMUST00000035026 Gsto1O09131 240 aa11.7□□□□□ -0.54
Trim42-201ENSMUST00000035026 Kcna6Q61923 529 aa11.7□□□□□ -0.54
Trim42-201ENSMUST00000035026 Zranb1Q7M760 708 aa11.7□□□□□ -0.54
Trim42-201ENSMUST00000035026 PtpruB1AUH1 1446 aa11.7□□□□□ -0.54
Trim42-201ENSMUST00000035026 Gimap5Q8BWF2 308 aa11.69□□□□□ -0.54
Trim42-201ENSMUST00000035026 Znf692Q3U381 531 aa11.69□□□□□ -0.54
Trim42-201ENSMUST00000035026 Pdcl3Q8BVF2 240 aa11.69□□□□□ -0.54
Trim42-201ENSMUST00000035026 Ttll13A4Q9F6 804 aa11.68□□□□□ -0.54
Trim42-201ENSMUST00000035026 FanciQ8K368 1330 aa11.68□□□□□ -0.54
Trim42-201ENSMUST00000035026 4933402E13RikQ9D4D2 429 aa11.68□□□□□ -0.54
Trim42-201ENSMUST00000035026 Farp2Q91VS8 1065 aa11.67□□□□□ -0.54
Trim42-201ENSMUST00000035026 Map3k19E9Q3S4 1311 aa11.67□□□□□ -0.54
Trim42-201ENSMUST00000035026 Skap1Q3UUV5 355 aa11.67□□□□□ -0.54
Trim42-201ENSMUST00000035026 Idi2Q8BFZ6 227 aa11.67□□□□□ -0.54
Trim42-201ENSMUST00000035026 Gtf3c6Q9D8P7 227 aa11.67□□□□□ -0.54
Trim42-201ENSMUST00000035026 Tom1O88746 492 aa11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 Gpatch11Q3UFS4 262 aa11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 Exosc9Q9JHI7 438 aaKnown RBP11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 Sbno1Q689Z5 1390 aa11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 Nrxn1Q9CS84 1514 aa11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 Adgrl1Q80TR1 1466 aa11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 Zfp142G5E869 1843 aa11.66□□□□□ -0.54
Trim42-201ENSMUST00000035026 GnpatP98192 678 aa11.65□□□□□ -0.54
Trim42-201ENSMUST00000035026 Ripply1Q2WG77 201 aa11.65□□□□□ -0.54
Trim42-201ENSMUST00000035026 Kif24Q6NWW5 1356 aa11.65□□□□□ -0.54
Trim42-201ENSMUST00000035026 Marf1Q8BJ34 1730 aaKnown RBP11.65□□□□□ -0.54
Trim42-201ENSMUST00000035026 Ddx17Q501J6 650 aaKnown RBP11.64□□□□□ -0.55
Trim42-201ENSMUST00000035026 Ap3b2Q9JME5 1082 aa11.64□□□□□ -0.55
Trim42-201ENSMUST00000035026 Wdr17E9Q271 1322 aa11.63□□□□□ -0.55
Trim42-201ENSMUST00000035026 Anp32aO35381 247 aa11.63□□□□□ -0.55
Trim42-201ENSMUST00000035026 Cnga1P29974 684 aa11.63□□□□□ -0.55
Trim42-201ENSMUST00000035026 AcrbpQ3V140 540 aa11.63□□□□□ -0.55
Trim42-201ENSMUST00000035026 Fam43aQ8BUP8 424 aa11.63□□□□□ -0.55
Trim42-201ENSMUST00000035026 Ecm2Q5FW85 670 aa11.63□□□□□ -0.55
Trim42-201ENSMUST00000035026 Chrna2Q91X60 512 aa11.62□□□□□ -0.55
Trim42-201ENSMUST00000035026 Gtf2a1Q99PM3 378 aa11.62□□□□□ -0.55
Trim42-201ENSMUST00000035026 Abca15E9PWH4 1668 aa11.61□□□□□ -0.55
Trim42-201ENSMUST00000035026 Plekhg5Q66T02 1073 aa11.61□□□□□ -0.55
Trim42-201ENSMUST00000035026 Atp7bQ64446 1462 aa11.61□□□□□ -0.55
Trim42-201ENSMUST00000035026 Slc35g1Q8BY79 368 aa11.6□□□□□ -0.55
Trim42-201ENSMUST00000035026 Znf335A2A5K6 1337 aa11.6□□□□□ -0.55
Trim42-201ENSMUST00000035026 PrxO55103 1391 aa11.6□□□□□ -0.55
Trim42-201ENSMUST00000035026 Nop58Q6DFW4 536 aaKnown RBP11.6□□□□□ -0.55
Trim42-201ENSMUST00000035026 Chmp4bQ9D8B3 224 aaKnown RBP11.59□□□□□ -0.55
Trim42-201ENSMUST00000035026 Qtrt2B8ZXI1 415 aa11.59□□□□□ -0.55
Trim42-201ENSMUST00000035026 Znf526Q8BI66 675 aa11.59□□□□□ -0.55
Trim42-201ENSMUST00000035026 Ybx3Q9JKB3 361 aaKnown RBP11.59□□□□□ -0.55
Trim42-201ENSMUST00000035026 NinlQ6ZQ12 1394 aa11.58□□□□□ -0.56
Trim42-201ENSMUST00000035026 Fam184bQ0KK56 942 aa11.58□□□□□ -0.56
Trim42-201ENSMUST00000035026 Ccdc27Q3V036 639 aa11.58□□□□□ -0.56
Trim42-201ENSMUST00000035026 Mapk8ip2Q9ERE9 830 aa11.58□□□□□ -0.56
Trim42-201ENSMUST00000035026 Atp10bB1AWN4 1474 aa11.58□□□□□ -0.56
Trim42-201ENSMUST00000035026 Slc24a1Q91WD8 1130 aa11.58□□□□□ -0.56
Trim42-201ENSMUST00000035026 Col16a1Q8BLX7 1580 aa11.57□□□□□ -0.56
Trim42-201ENSMUST00000035026 Fam135bQ9DAI6 1403 aa11.57□□□□□ -0.56
Trim42-201ENSMUST00000035026 Mdc1Q5PSV9 1707 aa11.57□□□□□ -0.56
Trim42-201ENSMUST00000035026 Chrm1P12657 460 aa11.57□□□□□ -0.56
Trim42-201ENSMUST00000035026 Pank3Q8R2W9 370 aa11.57□□□□□ -0.56
Trim42-201ENSMUST00000035026 Tet3Q8BG87 1668 aa11.56□□□□□ -0.56
Trim42-201ENSMUST00000035026 Frmpd2A0A140LI67 1392 aa11.56□□□□□ -0.56
Trim42-201ENSMUST00000035026 Bcl2l12Q9D3J3 255 aa11.56□□□□□ -0.56
Trim42-201ENSMUST00000035026 Kif16bB1AVY7 1312 aa11.56□□□□□ -0.56
Trim42-201ENSMUST00000035026 Tmf1B9EKI3 1091 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Fyb1O35601 819 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 ErmnQ5EBJ4 281 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Slc5a4bQ91ZP4 660 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Armcx1Q9CX83 456 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Arid4aF8VPQ2 1261 aaKnown RBP11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Cers3Q1A3B0 383 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Nhsl1Q8CAF4 1587 aa11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Chd4Q6PDQ2 1915 aaKnown RBP11.55□□□□□ -0.56
Trim42-201ENSMUST00000035026 Rrp9Q91WM3 475 aaKnown RBP11.54□□□□□ -0.56
Trim42-201ENSMUST00000035026 Bcl9lQ67FY2 1494 aa11.54□□□□□ -0.56
Trim42-201ENSMUST00000035026 Inpp5dQ9ES52 1191 aa11.53□□□□□ -0.56
Trim42-201ENSMUST00000035026 Zmym3Q9JLM4 1370 aa11.53□□□□□ -0.56
Trim42-201ENSMUST00000035026 Ubr1O70481 1757 aa11.53□□□□□ -0.56
Trim42-201ENSMUST00000035026 Siglec1Q62230 1695 aa11.53□□□□□ -0.56
Trim42-201ENSMUST00000035026 Zfp91Q62511 572 aa11.52□□□□□ -0.56
Trim42-201ENSMUST00000035026 Cadps2Q8BYR5 1297 aa11.52□□□□□ -0.56
Trim42-201ENSMUST00000035026 PtprvP70289 1705 aa11.52□□□□□ -0.56
Trim42-201ENSMUST00000035026 Astn2Q80Z10 1352 aa11.52□□□□□ -0.56
Trim42-201ENSMUST00000035026 Scn7aB1AYL1 1681 aa11.52□□□□□ -0.57
Trim42-201ENSMUST00000035026 Nyap1Q6PFX7 833 aa11.52□□□□□ -0.57
Trim42-201ENSMUST00000035026 Dixdc1Q80Y83 711 aa11.52□□□□□ -0.57
Trim42-201ENSMUST00000035026 Smg6P61406 1418 aaKnown RBP11.52□□□□□ -0.57
Trim42-201ENSMUST00000035026 Gprasp1Q5U4C1 1347 aa11.51□□□□□ -0.57
Trim42-201ENSMUST00000035026 SafbD3YXK2 937 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms