RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 ChgaP26339 463 aaKnown RBP16.39■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Ksr2Q3UVC0 959 aa16.39■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Ciz1Q8VEH2 845 aa16.39■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Ccar1Q8CH18 1146 aaKnown RBP16.38■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Rlbp1Q9Z275 317 aa16.38■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Map3k19E9Q3S4 1311 aa16.38■□□□□ 0.21
Rnf4-201ENSMUST00000030992 NudcO35685 332 aaKnown RBP16.38■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Trim28Q62318 834 aa16.38■□□□□ 0.21
Rnf4-201ENSMUST00000030992 PaskQ8CEE6 1383 aa16.37■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Ttc21aQ8C0S4 1314 aa16.36■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Gemin5Q8BX17 1502 aaKnown RBP16.35■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Cavin4A2AMM0 362 aa16.35■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Kif1aP33173 1695 aa16.35■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Iqcf3Q9D498 203 aa16.35■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Atp7bQ64446 1462 aa16.34■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Cps1Q8C196 1500 aa16.34■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Chd2E9PZM4 1827 aaKnown RBP16.33■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Ankrd50F7BE84 1390 aa16.33■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Asxl2Q8BZ32 1370 aa16.33■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Q4VA45 678 aa16.33■□□□□ 0.21
Rnf4-201ENSMUST00000030992 Fchsd2Q3USJ8 740 aa16.33■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Slc12a5Q91V14 1138 aa16.33■□□□□ 0.2
Rnf4-201ENSMUST00000030992 CastP51125 788 aa16.32■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Tmc1Q8R4P5 757 aa16.32■□□□□ 0.2
Rnf4-201ENSMUST00000030992 PtpruB1AUH1 1446 aa16.32■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Pik3r4Q8VD65 1358 aa16.31■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Polr3glQ8R0C0 218 aa16.29■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Slit3Q9WVB4 1523 aa16.29■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Ppp1r3fQ9JIG4 799 aa16.29■□□□□ 0.2
Rnf4-201ENSMUST00000030992 PalmQ9Z0P4 383 aa16.29■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Spef2Q8C9J3 1734 aa16.29■□□□□ 0.2
Rnf4-201ENSMUST00000030992 IghaA0A0A6YXW6 389 aa16.28■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Pik3c2bE9QAN8 1632 aa16.28■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Adamtsl3G3UXC7 1706 aa16.28■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Ppp1r15aP17564 657 aa16.28■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Idi2Q8BFZ6 227 aa16.28■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Trim26Q99PN3 545 aa16.28■□□□□ 0.2
Rnf4-201ENSMUST00000030992 CanxP35564 591 aaKnown RBP16.27■□□□□ 0.2
Rnf4-201ENSMUST00000030992 Ccdc183A2AJB1 534 aa16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Ipo8Q7TMY7 1010 aa16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Ak7Q9D2H2 614 aa16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Swt1Q9DBQ9 907 aa16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Ccdc171E9Q1U1 1324 aa16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Tnrc6bQ8BKI2 1810 aaKnown RBP16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Dip2bQ3UH60 1574 aa16.26■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Rbm25B2RY56 838 aaKnown RBP16.25■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Ppm1gQ61074 542 aa16.25■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Dnai1Q8C0M8 701 aa16.25■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Uhrf1bp1lA2RSJ4 1457 aa16.25■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Psme1P97371 249 aa16.24■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Atl3Q91YH5 541 aa16.24■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Mdc1Q5PSV9 1707 aa16.23■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Ppp2r3aB2RXC8 1150 aa16.23■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Trim30dE9PWL0 497 aa16.23■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Txndc2Q6P902 515 aa16.22■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Arap3Q8R5G7 1538 aa16.22■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Hs1bp3Q3TC93 395 aa16.22■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Sart3Q9JLI8 962 aaKnown RBP16.22■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Ccdc60Q8C4J0 545 aa16.21■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Hoxb7P09024 217 aa16.21■□□□□ 0.19
Rnf4-201ENSMUST00000030992 4930567H17RikQ3V0K5 233 aa16.21■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Chd4Q6PDQ2 1915 aaKnown RBP16.21■□□□□ 0.19
Rnf4-201ENSMUST00000030992 N4bp2F8VQG7 1678 aaKnown RBP16.21■□□□□ 0.19
Rnf4-201ENSMUST00000030992 Med1Q925J9 1575 aa16.2■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Birc3O08863 600 aa16.2■□□□□ 0.18
Rnf4-201ENSMUST00000030992 CatipB9EKE5 520 aa16.2■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Mre11Q61216 706 aa16.2■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Rsph6aQ8CDR2 708 aa16.2■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Maco1Q7TQE6 664 aaKnown RBP16.19■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Sirt1Q923E4 737 aa16.19■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Armcx1Q9CX83 456 aa16.19■□□□□ 0.18
Rnf4-201ENSMUST00000030992 G3bp1P97855 465 aaKnown RBP16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Dnajc5gQ8C632 165 aa16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 PzpQ61838 1495 aa16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 NalcnQ8BXR5 1738 aa16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Ppp1r9bQ6R891 817 aaKnown RBP16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Eif2s2Q99L45 331 aaKnown RBP16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Cdc37l1Q9CZP7 335 aa16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Bcl11aQ9QYE3 773 aa16.18■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Znf316Q6PGE4 1016 aa16.17■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Nsd3Q6P2L6 1439 aa16.17■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Vamp4O70480 141 aa16.16■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Phlpp2Q8BXA7 1320 aa16.16■□□□□ 0.18
Rnf4-201ENSMUST00000030992 AU019823E9PUQ3 292 aa16.16■□□□□ 0.18
Rnf4-201ENSMUST00000030992 KarsQ99MN1 595 aaKnown RBP16.16■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Hsp90ab1P11499 724 aaKnown RBP16.16■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Pnmal2G3X9N3 661 aa16.15■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Plekhm2Q80TQ5 1018 aa16.15■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Hsp90aa1P07901 733 aaKnown RBP16.15■□□□□ 0.18
Rnf4-201ENSMUST00000030992 Astn2Q80Z10 1352 aa16.14■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Rreb1Q3UH06 1700 aaKnown RBP16.14■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Znf335A2A5K6 1337 aa16.14■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Gnai1B2RSH2 354 aa16.13■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Q3UPC7 1272 aa16.13■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Aldh1l1Q8R0Y6 902 aa16.13■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Gnai3Q9DC51 354 aa16.13■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Tbc1d32Q3URV1 1296 aa16.13■□□□□ 0.17
Rnf4-201ENSMUST00000030992 HnrnpmQ9D0E1 729 aaKnown RBP16.13■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Cluap1Q8R3P7 413 aa16.12■□□□□ 0.17
Rnf4-201ENSMUST00000030992 Znf330Q922H9 316 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms