RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Tnks1bp1P58871 1720 aa28.9■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 ZgpatQ8VDM1 511 aa28.89■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Pola1P33609 1465 aa28.89■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Rtl5Q5DTT4 599 aa28.88■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 PaskQ8CEE6 1383 aa28.88■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 Zmym3Q9JLM4 1370 aa28.87■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 Bcl9lQ67FY2 1494 aa28.85■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 Neurod1Q60867 357 aa28.85■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 Gtf2e1Q9D0D5 440 aa28.85■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 TimelessQ9R1X4 1197 aa28.85■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 Robo1O89026 1612 aa28.83■■■□□ 2.21
Ttc39b-201ENSMUST00000030205 Mier1Q5UAK0 511 aa28.82■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Dzip1Q8BMD2 852 aa28.82■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Sugp2Q8CH09 1067 aa28.82■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Sbno1Q689Z5 1390 aa28.82■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Mug2P28666 1451 aa28.81■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 HdgfP51859 237 aaKnown RBP28.81■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 CenpjQ569L8 1344 aa28.8■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Ccdc129Q14B48 1034 aa28.8■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Cacna1sQ02789 1880 aa28.77■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Tet3Q8BG87 1668 aa28.77■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Ncapd2Q8K2Z4 1392 aa28.76■■■□□ 2.2
Ttc39b-201ENSMUST00000030205 Gsto1O09131 240 aa28.76■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Kiaa0319Q5SZV5 1081 aa28.76■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Stard8Q8K031 1019 aa28.76■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Nid2O88322 1403 aa28.76■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Card11Q8CIS0 1159 aa28.75■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Idi2Q8BFZ6 227 aa28.74■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Adamtsl1Q8BLI0 1745 aa28.72■■■□□ 2.19
Ttc39b-201ENSMUST00000030205 Srcin1Q9QWI6 1250 aa28.7■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Pard3Q99NH2 1333 aa28.69■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Zbtb4Q5F293 982 aa28.69■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Frmpd2A0A140LI67 1392 aa28.69■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Nup153E9Q3G8 1462 aaKnown RBP28.68■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 CatipB9EKE5 520 aa28.68■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Ly75Q60767 1723 aa28.68■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Map3k19E9Q3S4 1311 aa28.68■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Ubap1lG3UW59 384 aa28.67■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Fer1l6E0CZ42 1862 aa28.66■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Gm21698A0A087WQP8 267 aa28.65■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Gm21671G3UY31 267 aa28.65■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 Gimap6Q8K349 305 aa28.65■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 OscarQ8VBT3 265 aa28.64■■■□□ 2.18
Ttc39b-201ENSMUST00000030205 FanciQ8K368 1330 aa28.63■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 Exosc9Q9JHI7 438 aaKnown RBP28.61■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 Pm20d1Q8C165 503 aa28.59■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 VirmaA2AIV2 1811 aaKnown RBP28.59■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 TonslQ6NZL6 1363 aa28.59■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 Ncoa4Q5U4H9 625 aa28.58■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 Slx1bQ8BX32 270 aa28.58■■■□□ 2.17
Ttc39b-201ENSMUST00000030205 Taok3Q8BYC6 898 aa28.57■■■□□ 2.16
Ttc39b-201ENSMUST00000030205 Znf335A2A5K6 1337 aa28.57■■■□□ 2.16
Ttc39b-201ENSMUST00000030205 Mast2Q60592 1734 aa28.56■■■□□ 2.16
Ttc39b-201ENSMUST00000030205 Ppp6r1Q7TSI3 856 aa28.53■■■□□ 2.16
Ttc39b-201ENSMUST00000030205 Zeb2Q9R0G7 1215 aa28.53■■■□□ 2.16
Ttc39b-201ENSMUST00000030205 Card10P58660 1021 aa28.49■■■□□ 2.15
Ttc39b-201ENSMUST00000030205 InsrP15208 1372 aa28.49■■■□□ 2.15
Ttc39b-201ENSMUST00000030205 Rundc1Q0VDN7 615 aa28.46■■■□□ 2.15
Ttc39b-201ENSMUST00000030205 Kat6bQ8BRB7 1872 aa28.46■■■□□ 2.15
Ttc39b-201ENSMUST00000030205 Gm21190A0A0G2JGJ6 266 aa28.45■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 4930523C07RikE9Q2T4 99 aa28.45■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Kif16bB1AVY7 1312 aa28.44■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Amotl2Q8K371 772 aa28.44■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Rock2P70336 1388 aa28.43■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Cnga1P29974 684 aa28.41■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Dennd6aQ8BH65 605 aa28.41■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Kcnh5Q920E3 988 aa28.4■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Dnajc10Q9DC23 793 aa28.4■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Nckap5lQ6GQX2 1323 aa28.4■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 TnrQ8BYI9 1358 aa28.39■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Apba2P98084 750 aa28.39■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Nlgn1Q99K10 843 aa28.39■■■□□ 2.14
Ttc39b-201ENSMUST00000030205 Akap11E9Q777 1895 aa28.36■■■□□ 2.13
Ttc39b-201ENSMUST00000030205 RgmbQ7TQ33 436 aa28.34■■■□□ 2.13
Ttc39b-201ENSMUST00000030205 Nwd2Q6P5U7 1742 aa28.32■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 GakQ99KY4 1305 aa28.32■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Fmnl2A2APV2 1086 aa28.31■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Vps33bP59016 617 aa28.3■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 TatQ8QZR1 454 aa28.29■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Cabp4Q8VHC5 271 aa28.29■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Ankrd23Q812A3 306 aa28.28■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Ezh2Q61188 746 aaKnown RBP28.27■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Astn2Q80Z10 1352 aa28.26■■■□□ 2.12
Ttc39b-201ENSMUST00000030205 Zcrb1Q9CZ96 217 aaKnown RBP28.26■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 GalcP54818 684 aa28.25■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Nol11Q8BJW5 723 aaKnown RBP28.25■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Lrit1Q8K099 624 aa28.25■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Uhrf1bp1lA2RSJ4 1457 aa28.25■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Chd4Q6PDQ2 1915 aaKnown RBP28.24■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Mdc1Q5PSV9 1707 aa28.23■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Cdk12Q14AX6 1484 aaKnown RBP28.23■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Rab3gap2Q8BMG7 1366 aa28.23■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Ddb1Q3U1J4 1140 aaKnown RBP28.22■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Ano8Q6PB70 1060 aa28.21■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 FancaQ9JL70 1439 aa28.2■■■□□ 2.11
Ttc39b-201ENSMUST00000030205 Pak3Q61036 559 aa28.2■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Vars2Q3U2A8 1060 aa28.19■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Ubr1O70481 1757 aa28.19■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Ppfibp2O35711 882 aa28.18■■■□□ 2.1
Ttc39b-201ENSMUST00000030205 Mst1rQ62190 1378 aa28.16■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms