RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Slc35g1Q8BY79 368 aa20.63■□□□□ 0.89
Ddx49-201ENSMUST00000008004 Birc3O08863 600 aa20.61■□□□□ 0.89
Ddx49-201ENSMUST00000008004 Astn2Q80Z10 1352 aa20.6■□□□□ 0.89
Ddx49-201ENSMUST00000008004 Camta1A2A891 1682 aa20.58■□□□□ 0.89
Ddx49-201ENSMUST00000008004 Frmpd2A0A140LI67 1392 aa20.57■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Mak16Q8BGS0 296 aaKnown RBP20.57■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Col16a1Q8BLX7 1580 aa20.57■□□□□ 0.88
Ddx49-201ENSMUST00000008004 GsdmaQ9EST1 446 aa20.57■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Wnk3Q80XP9 1757 aa20.56■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Atf3Q60765 181 aa20.56■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Trim28Q62318 834 aa20.56■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Ubr1O70481 1757 aa20.55■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Kcna6Q61923 529 aa20.54■□□□□ 0.88
Ddx49-201ENSMUST00000008004 CemipQ8BI06 1361 aa20.54■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Cdk12Q14AX6 1484 aaKnown RBP20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Map2P20357 1828 aa20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 GnpatP98192 678 aa20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Dennd6aQ8BH65 605 aa20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Farp2Q91VS8 1065 aa20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Nlgn1Q99K10 843 aa20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Wdr17E9Q271 1322 aa20.53■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Hoxb7P09024 217 aa20.52■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Brinp3Q499E0 766 aa20.52■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Tsen2Q6P7W5 460 aa20.52■□□□□ 0.88
Ddx49-201ENSMUST00000008004 Ofd1Q80Z25 1017 aa20.51■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Nckap5lQ6GQX2 1323 aa20.51■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Ddx17Q501J6 650 aaKnown RBP20.51■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Slc12a5Q91V14 1138 aa20.5■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Gm21190A0A0G2JGJ6 266 aa20.5■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Usp19Q3UJD6 1360 aa20.49■□□□□ 0.87
Ddx49-201ENSMUST00000008004 U2af1Q9D883 239 aaKnown RBP20.49■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Mdc1Q5PSV9 1707 aa20.48■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Fyb1O35601 819 aa20.48■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Golga2Q921M4 999 aa20.48■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Tcerg1Q8CGF7 1100 aaKnown RBP20.48■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Uhrf1bp1lA2RSJ4 1457 aa20.48■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Ppp1r15aP17564 657 aa20.47■□□□□ 0.87
Ddx49-201ENSMUST00000008004 CrbnQ8C7D2 445 aa20.47■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Scn7aB1AYL1 1681 aa20.47■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Zfp444Q3TDV8 331 aaKnown RBP20.47■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Anks4bQ8K3X6 423 aa20.47■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Cabp4Q8VHC5 271 aa20.47■□□□□ 0.87
Ddx49-201ENSMUST00000008004 Rad21Q61550 635 aaKnown RBP20.46■□□□□ 0.87
Ddx49-201ENSMUST00000008004 FancaQ9JL70 1439 aa20.45■□□□□ 0.86
Ddx49-201ENSMUST00000008004 TimelessQ9R1X4 1197 aa20.45■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Map4k4P97820 1233 aaKnown RBP20.44■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Uspl1Q3ULM6 1089 aa20.43■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Ncapd2Q8K2Z4 1392 aa20.42■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Apaf1O88879 1249 aa20.42■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Rsph6aQ8CDR2 708 aa20.42■□□□□ 0.86
Ddx49-201ENSMUST00000008004 PalmQ9Z0P4 383 aa20.42■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Ncoa4Q5U4H9 625 aa20.41■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Gimap6Q8K349 305 aa20.39■□□□□ 0.86
Ddx49-201ENSMUST00000008004 Eif4a2P10630 407 aa20.39■□□□□ 0.85
Ddx49-201ENSMUST00000008004 PtprvP70289 1705 aa20.38■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Ecm2Q5FW85 670 aa20.38■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Eif5bQ05D44 1216 aaKnown RBP20.38■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Ano8Q6PB70 1060 aa20.38■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Parp14Q2EMV9 1817 aa20.37■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Nfat5Q9WV30 1534 aa20.37■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Speer4f1Q9D5Q6 258 aa20.36■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Dixdc1Q80Y83 711 aa20.36■□□□□ 0.85
Ddx49-201ENSMUST00000008004 DccP70211 1447 aa20.35■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Tmem132eQ6IEE6 982 aa20.34■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Dzip1Q8BMD2 852 aa20.34■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Spef2Q8C9J3 1734 aa20.34■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Hoxc9P09633 260 aa20.33■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Neurod2Q62414 383 aa20.33■□□□□ 0.85
Ddx49-201ENSMUST00000008004 Robo1O89026 1612 aa20.33■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Fam135bQ9DAI6 1403 aa20.32■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Siglec1Q62230 1695 aa20.32■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Q4VA45 678 aa20.32■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Kif24Q6NWW5 1356 aa20.32■□□□□ 0.84
Ddx49-201ENSMUST00000008004 MpripP97434 1024 aa20.32■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Mcm10Q0VBD2 885 aa20.32■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Fchsd2Q3USJ8 740 aa20.31■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Scaf1Q5U4C3 1256 aaKnown RBP20.31■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Dnajc10Q9DC23 793 aa20.31■□□□□ 0.84
Ddx49-201ENSMUST00000008004 PaskQ8CEE6 1383 aa20.3■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Tet3Q8BG87 1668 aa20.3■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Ccne1Q61457 408 aa20.3■□□□□ 0.84
Ddx49-201ENSMUST00000008004 TatQ8QZR1 454 aa20.3■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Kcnh5Q920E3 988 aa20.3■□□□□ 0.84
Ddx49-201ENSMUST00000008004 L3mbtl2P59178 703 aa20.29■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Mapk8ip3Q9ESN9 1337 aa20.29■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Ttll13A4Q9F6 804 aa20.29■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Plin1Q8CGN5 517 aa20.28■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Atxn3Q9CVD2 355 aa20.28■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Dusp27Q148W8 1138 aa20.27■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Rad17Q6NXW6 688 aa20.27■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Ccdc30Q8BVF4 654 aa20.27■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Abca15E9PWH4 1668 aa20.27■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Eya1P97767 591 aa20.27■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Ralbp1Q62172 648 aa20.27■□□□□ 0.84
Ddx49-201ENSMUST00000008004 Znf541Q0GGX2 1363 aa20.26■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Ptpn23Q6PB44 1692 aa20.26■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Fmnl2A2APV2 1086 aa20.25■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Erbb3Q61526 1339 aa20.25■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Cavin4A2AMM0 362 aa20.24■□□□□ 0.83
Ddx49-201ENSMUST00000008004 Gimap5Q8BWF2 308 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 76.3 ms