RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CORO7P57737 925 aa15.05■□□□□ -0
CCDC50-201ENST00000392455 ALX1Q15699 326 aa15.05■□□□□ -0
CCDC50-201ENST00000392455 MGAT5BQ3V5L5 792 aa15.05■□□□□ -0
CCDC50-201ENST00000392455 CD302Q8IX05 232 aa15.05■□□□□ -0
CCDC50-201ENST00000392455 PCDHGC5Q9Y5F6 944 aa15.05■□□□□ -0
CCDC50-201ENST00000392455 CDC42BPAQ5VT25 1732 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 CHRNGP07510 517 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 ADARP55265 1226 aaKnown RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 NAB1Q13506 487 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 PTPAQ15257 358 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 FAM187BQ17R55 369 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 TFDP3Q5H9I0 405 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 REXO5Q96IC2 774 aaKnown RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 GPAMQ9HCL2 828 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 EHD3Q9NZN3 535 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 SPATA31A3Q5VYP0 1347 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 SLC25A12O75746 678 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 SNRNP35Q16560 246 aaKnown RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 LONRF1Q17RB8 773 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 C1orf189Q5VU69 101 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 HPS1Q92902 700 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 NOL6Q9H6R4 1146 aaKnown RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 NCKAP1Q9Y2A7 1128 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 CCDC88CQ9P219 2028 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 LINC00854A0A1B0GVQ3 168 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 DDHD2O94830 711 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 ITIH1P19827 911 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 MSR1P21757 451 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 BTKQ06187 659 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 LRRC40Q9H9A6 602 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 CRABP2P29373 138 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 TTC29Q8NA56 475 aaPredicted RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 IPMKQ8NFU5 416 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 ISCUQ9H1K1 167 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 L1RE1Q9UN81 338 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 FARP2O94887 1054 aaPredicted RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 EPN2O95208 641 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 ITGA4P13612 1032 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 GPD1P21695 349 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 RAB11FIP2Q7L804 512 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 SYTL5Q8TDW5 730 aaPredicted RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 FAM84BQ96KN1 310 aaPredicted RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 REEP2Q9BRK0 252 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 C17orf75Q9HAS0 396 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 NINQ8N4C6 2090 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 CXCR2P25025 360 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 TKFCQ3LXA3 575 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 XRRA1Q6P2D8 792 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 KCNN2Q9H2S1 579 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 RUVBL2Q9Y230 463 aaKnown RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 IGSF9BQ9UPX0 1349 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 A0A1W2PQJ5 194 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 FOXO4P98177 505 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 EN1Q05925 392 aaPredicted RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
CCDC50-201ENST00000392455 STRIP1Q5VSL9 837 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 ZFP28Q8NHY6 868 aa15.04■□□□□ -0
CCDC50-201ENST00000392455 SUPT7LO94864 414 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 GH1P01241 217 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 FOSL2P15408 326 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 TLX1P31314 330 aaPredicted RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 ZNF157P51786 506 aaPredicted RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 ZNF135P52742 658 aaPredicted RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 SNAPC2Q13487 334 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 ANO7Q6IWH7 933 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 LAYNQ6UX15 382 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 RERGLQ9H628 205 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 TBC1D13Q9NVG8 400 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 ZNF214Q9UL59 606 aaPredicted RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 LOC100653049A0A140TA62 436 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 OR1G1P47890 313 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 AKR1D1P51857 326 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 CDC42P60953 191 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 MYCBPAPQ8TBZ2 947 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 PAIP1Q9H074 479 aaKnown RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 RAPGEFL1Q9UHV5 662 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 DBR1Q9UK59 544 aaKnown RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 SNX8Q9Y5X2 465 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 ABCA8O94911 1581 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 KRT33AO76009 404 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 MYBP10242 640 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 POLR2LP62875 67 aaKnown RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 RBM20Q5T481 1227 aaKnown RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 NOTUMQ6P988 496 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 BBS4Q96RK4 519 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 CCNB1IP1Q9NPC3 277 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 F5H5T6 163 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 PGRMC2O15173 223 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 HLA-DQA2P01906 255 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 RB1P06400 928 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 FMO5P49326 533 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 CDK7P50613 346 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 ARFIP1P53367 373 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 IST1P53990 364 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 TAF1CQ15572 869 aaPredicted RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 ZBTB6Q15916 424 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 GOLGA7BQ2TAP0 167 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 DSG4Q86SJ6 1040 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms