RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 E2F8A0AVK6 867 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 TMEM191CA6NGB0 347 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 IGLV3-27P01718 113 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 CORO1AP31146 461 aaKnown RBP31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 SDC4P31431 198 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 SPA17Q15506 151 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 ZC3H12AQ5D1E8 599 aaKnown RBP31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 CC2D1AQ6P1N0 951 aaPredicted RBP31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 HTR3DQ70Z44 454 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 BBS7Q8IWZ6 715 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 ACRBPQ8NEB7 543 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 PLD4Q96BZ4 506 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 SLC39A13Q96H72 371 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 MRPL47Q9HD33 250 aaKnown RBP31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 PIGVQ9NUD9 493 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 THG1LQ9NWX6 298 aaKnown RBP31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 RRN3Q9NYV6 651 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 MUTYHQ9UIF7 546 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 REXO2Q9Y3B8 237 aaKnown RBP31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 PCDHA13Q9Y5I0 950 aa31.84■■■□□ 2.69
CSNK1E-206ENST00000413574 TMEM253P0C7T8 217 aa31.83■■■□□ 2.69
CSNK1E-206ENST00000413574 DENND1CQ8IV53 801 aa31.83■■■□□ 2.69
CSNK1E-206ENST00000413574 DUS2Q9NX74 493 aaKnown RBP31.83■■■□□ 2.69
CSNK1E-206ENST00000413574 GBP1P32455 592 aa31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 KPNA1P52294 538 aaPredicted RBP31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 TNK2Q07912 1038 aa31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 OSCP1Q8WVF1 389 aa31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 DESI2Q9BSY9 194 aa31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 BRD9Q9H8M2 597 aa31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 LSM7Q9UK45 103 aaKnown RBP31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 SORCS3Q9UPU3 1222 aa31.82■■■□□ 2.69
CSNK1E-206ENST00000413574 MYOFQ9NZM1 2061 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 BDP1A6H8Y1 2624 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 ZNF143P52747 638 aaPredicted RBP31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 DEUP1Q05D60 604 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 ZNF252P-AS1Q0IIN9 211 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 NNTQ13423 1086 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 C10orf76Q5T2E6 689 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 Q6ZNB5 142 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 BNIPLQ7Z465 357 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 BTBD6Q96KE9 485 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 FAM83CQ9BQN1 747 aa31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 AGO1Q9UL18 857 aaKnown RBP31.82■■■□□ 2.68
CSNK1E-206ENST00000413574 CHADO15335 359 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 CCP110O43303 1012 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 ARSAP15289 507 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 PTPN9P43378 593 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 HARS2P49590 506 aaKnown RBP31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 CCZ1BP86790 482 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 CCZ1P86791 482 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 RING1Q06587 406 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 ARHGAP29Q52LW3 1261 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 RNF34Q969K3 372 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 PGAP3Q96FM1 320 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 EBF3Q9H4W6 596 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 CTTNBP2NLQ9P2B4 639 aa31.81■■■□□ 2.68
CSNK1E-206ENST00000413574 NCOR1O75376 2440 aa31.8■■■□□ 2.68
CSNK1E-206ENST00000413574 MOCS2O96007 188 aaPredicted RBP31.8■■■□□ 2.68
CSNK1E-206ENST00000413574 TTC8Q8TAM2 541 aa31.8■■■□□ 2.68
CSNK1E-206ENST00000413574 FAM172AQ8WUF8 416 aa31.8■■■□□ 2.68
CSNK1E-206ENST00000413574 OSGEPQ9NPF4 335 aa31.8■■■□□ 2.68
CSNK1E-206ENST00000413574 ARNTLO00327 626 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 IFNAR2P48551 515 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 EML3Q32P44 896 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 CCDC112Q8NEF3 446 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 ZNF564Q8TBZ8 553 aaPredicted RBP31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 CENPIQ92674 756 aaPredicted RBP31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 CNPY3Q9BT09 278 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 HPS4Q9NQG7 708 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 GTSE1Q9NYZ3 720 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 XPO7Q9UIA9 1087 aaKnown RBP31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 ANAPC7Q9UJX3 599 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 DUSP12Q9UNI6 340 aa31.79■■■□□ 2.68
CSNK1E-206ENST00000413574 RCCD1A6NED2 376 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 ENDOD1O94919 500 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 IPO7O95373 1038 aaKnown RBP31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 PTMAP06454 111 aaKnown RBP31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 PSMA2P25787 234 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 RDXP35241 583 aaKnown RBP31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 NUGGCQ68CJ6 796 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 DCLK3Q9C098 648 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 ANLNQ9NQW6 1124 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.78■■■□□ 2.684e-10■■■■□ 20.9
CSNK1E-206ENST00000413574 INTUQ9ULD6 942 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 OTOL1A6NHN0 477 aaPredicted RBP31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 SRFP11831 508 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 CXCR3P49682 368 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 HDAC4P56524 1084 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 IER5LQ5T953 404 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 FAM131BQ86XD5 332 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 UNC45BQ8IWX7 931 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 SLC35G2Q8TBE7 412 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 TMPRSS4Q9NRS4 437 aa31.78■■■□□ 2.68
CSNK1E-206ENST00000413574 COL4A2P08572 1712 aa31.77■■■□□ 2.68
CSNK1E-206ENST00000413574 F9P00740 461 aa31.77■■■□□ 2.68
CSNK1E-206ENST00000413574 CCR1P32246 355 aa31.77■■■□□ 2.68
CSNK1E-206ENST00000413574 VCPP55072 806 aaKnown RBP31.77■■■□□ 2.68
CSNK1E-206ENST00000413574 SND1Q7KZF4 910 aaKnown RBP eCLIP31.77■■■□□ 2.68
CSNK1E-206ENST00000413574 ADGRG2Q8IZP9 1017 aa31.77■■■□□ 2.68
CSNK1E-206ENST00000413574 IRF7Q92985 503 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms