RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LAMA1P25391 3075 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 A0A1B0GTH6 734 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 BEST1O76090 585 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 PUM1Q14671 1186 aaKnown RBP eCLIP16.53■□□□□ 0.24
USB1-208ENST00000563207 KLHDC7AQ5VTJ3 777 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 LAIR1Q6GTX8 287 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 ACOT1Q86TX2 421 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 WDR5BQ86VZ2 330 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 ARHGEF19Q8IW93 802 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 CPA6Q8N4T0 437 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 UBR7Q8N806 425 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 WHAMMQ8TF30 809 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 WBP2Q969T9 261 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 TMEM176AQ96HP8 235 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 HHIPQ96QV1 700 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 ARID3AQ99856 593 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 SIX2Q9NPC8 291 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
USB1-208ENST00000563207 GMEB2Q9UKD1 530 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 CNTN6Q9UQ52 1028 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 CPQQ9Y646 472 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 MYH10P35580 1976 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 DCDC2BA2VCK2 349 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 TRIM66O15016 1216 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 GDF9O60383 454 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 OAS1P00973 400 aaKnown RBP16.52■□□□□ 0.24
USB1-208ENST00000563207 TPM3P06753 285 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 PAEPP09466 180 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 CCDC130P13994 396 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 ACO1P21399 889 aaKnown RBP16.52■□□□□ 0.24
USB1-208ENST00000563207 OPRD1P41143 372 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 SLC6A11P48066 632 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 UBASH3AP57075 661 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 FANCCQ00597 558 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 NR1I3Q14994 352 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 KBTBD6Q86V97 674 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 FUKQ8N0W3 1084 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 RPLP0P6Q8NHW5 317 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 CD101Q93033 1021 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 KREMEN1Q96MU8 473 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 ELOVL4Q9GZR5 314 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 RAB23Q9ULC3 237 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 SIK3Q9Y2K2 1263 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 PCDHB4Q9Y5E5 795 aa16.52■□□□□ 0.24
USB1-208ENST00000563207 A0A1W2PQC6 194 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 TNFRSF10BO14763 440 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 DCLK1O15075 740 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 AXIN1O15169 862 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 OLFM2O95897 454 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 RAD23BP54727 409 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SEC13P55735 322 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SLC7A9P82251 487 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 FOXK2Q01167 660 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SYCP1Q15431 976 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 DPY19L2P1Q6NXN4 242 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 TMEM270Q6UE05 265 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 CEP68Q76N32 757 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.51■□□□□ 0.23
USB1-208ENST00000563207 FAM35AQ86V20 835 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 C12orf29Q8N999 325 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SLC4A11Q8NBS3 891 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 ZMIZ2Q8NF64 920 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SECISBP2LQ93073 1101 aaKnown RBP16.51■□□□□ 0.23
USB1-208ENST00000563207 ATP2A3Q93084 1043 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 HNRNPABQ99729 332 aaKnown RBP16.51■□□□□ 0.23
USB1-208ENST00000563207 SMOQ99835 787 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 MED10Q9BTT4 135 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 LSM14BQ9BX40 385 aaKnown RBP16.51■□□□□ 0.23
USB1-208ENST00000563207 ZDHHC4Q9NPG8 344 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SEMA4GQ9NTN9 838 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 CFAP97Q9P2B7 532 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 SLC8A2Q9UPR5 921 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 INVSQ9Y283 1065 aa16.51■□□□□ 0.23
USB1-208ENST00000563207 K7EQS6 105 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 CYP17A1P05093 508 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 RETP07949 1114 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 VDRP11473 427 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 UCHL3P15374 230 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 TCF3P15923 654 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 DRD1P21728 446 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 HOXA6P31267 233 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 STILQ15468 1287 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 ZNF394Q53GI3 561 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 C12orf40Q86WS4 652 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 ADGRG2Q8IZP9 1017 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 NUP93Q8N1F7 819 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 RNF214Q8ND24 703 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 NEK11Q8NG66 645 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 SHC3Q92529 594 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 KAT5Q92993 513 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 CYFIP2Q96F07 1278 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 ZFRQ96KR1 1074 aaKnown RBP16.5■□□□□ 0.23
USB1-208ENST00000563207 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
USB1-208ENST00000563207 HEXIM2Q96MH2 286 aaKnown RBP16.5■□□□□ 0.23
USB1-208ENST00000563207 STK33Q9BYT3 514 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 SMOC1Q9H4F8 434 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 CCSER2Q9H7U1 834 aa16.5■□□□□ 0.23
USB1-208ENST00000563207 RXFP3Q9NSD7 469 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms