RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Smad1P70340 465 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gpsm3Q3U1Z5 159 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pid1Q3UBG2 217 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Q3UE31 404 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Upf3bQ3ULL6 472 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Klf4Q60793 483 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tfdp2Q64163 446 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zfp157Q6PCM4 567 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 GnasQ6R0H7 1133 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Siglec10Q80ZE3 688 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Atg4cQ811C2 458 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Enpp4Q8BTJ4 456 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Catsper4Q8BVN3 442 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Yars2Q8BYL4 472 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Proser2Q8C5R2 471 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Calhm4Q8CE93 315 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pcdhgb4Q91XX6 912 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 CoprsQ9CQ13 173 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 MlklQ9D2Y4 472 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dclre1aQ9JIC3 1026 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ddx21Q9JIK5 851 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Il20Q9JKV9 176 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ap1m2Q9WVP1 423 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ptgdr2Q9Z2J6 382 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sdccag3A2AIW0 432 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Rabgap1A2AWA9 1064 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mms22lB1AUR6 1238 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gm5795E9PZN8 263 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 8030474K03RikE9Q4Y8 554 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mgat1P27808 447 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 IvlP48997 467 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Nploc4P60670 608 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Prr7Q3V0I2 269 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Etaa1Q5SVT3 877 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tfap2bQ61313 459 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Itih3Q61704 889 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Plekha6Q7TQG1 1173 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gramd1bQ80TI0 738 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Znf879Q8BI99 563 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mettl21cQ8BLU2 248 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ccdc68Q8BVC4 333 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tmem145Q8C4U2 746 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tph2Q8CGV2 488 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 PlvapQ91VC4 438 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 NcaldQ91X97 193 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dnajc3Q91YW3 504 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mcrs1Q99L90 462 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Cttnbp2nlQ99LJ0 638 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tspan17Q9D7W4 270 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 PrccQ9EQC8 491 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Kdelc1Q9JHP7 502 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trpc5Q9QX29 975 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Rpl9-ps1S4R1R7 191 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Col11a1Q61245 1804 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fndc3c1Q6DFV6 1356 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pcdh7A0A0A6YY83 1255 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 4921501E09RikA0A0R4J054 908 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Prrt4B2RU40 902 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Acp4D3YTS9 425 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lipo2D3YY49 398 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Mdm4O35618 489 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Per2O54943 1257 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Lamp1P11438 406 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Oprl1P35377 367 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pde1bQ01065 535 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ect2Q07139 913 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Znf112Q0VAW7 879 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Gsdmc4Q3TR54 480 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Rrp36Q3UFY0 244 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tars2Q3UQ84 723 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 1700057G04RikQ3V0U0 232 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Prkaa1Q5EG47 559 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Luc7l3Q5SUF2 432 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sp4Q62445 782 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ugt1a9Q62452 528 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Atp6v0d2Q80SY3 350 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 SnphQ80U23 495 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Wnk4Q80UE6 1222 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Pgrmc2Q80UU9 217 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Dtx3Q80V91 347 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Vmn2r43Q80Z08 845 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Fbxo44Q8BK26 255 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Q8BZE1 841 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Trappc12Q8K2L8 797 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Sorcs3Q8VI51 1219 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tom1l1Q923U0 474 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Bbs5Q9CZQ9 341 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Terb2Q9D494 218 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ccdc124Q9D8X2 217 aaKnown RBP6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Htra2Q9JIY5 458 aa6.5□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zscan4-ps1A0A1C7CYV3 506 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zscan4dA7KBS4 506 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Olfr376E9Q4M1 320 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Alas2P08680 587 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Ppm1jQ149T7 507 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Hsdl2Q2TPA8 490 aaKnown RBP6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Slc10a4Q3UEZ8 437 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 McuQ3UMR5 350 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Tfcp2l1Q3UNW5 479 aa6.49□□□□□ -1.37
Lig4-202ENSMUST00000170033 Zscan4fQ3URS2 506 aa6.49□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms