Protein–RNA interactions for Protein: Q8CE93

Calhm4, Calcium homeostasis modulator protein 4, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calhm4Q8CE93 Gm25239-201ENSMUST00000174915 86 ntBASIC45.34■■■■■ 4.85
Calhm4Q8CE93 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.02■■■■■ 4.32
Calhm4Q8CE93 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
Calhm4Q8CE93 Gm24109-201ENSMUST00000175489 103 ntBASIC39.44■■■■□ 3.9
Calhm4Q8CE93 Gm15042-201ENSMUST00000120212 883 ntBASIC39.4■■■■□ 3.9
Calhm4Q8CE93 Gm15045-201ENSMUST00000117359 883 ntBASIC38.62■■■■□ 3.77
Calhm4Q8CE93 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Calhm4Q8CE93 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.72
Calhm4Q8CE93 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Calhm4Q8CE93 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.82■■■■□ 3.64
Calhm4Q8CE93 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Calhm4Q8CE93 Gm23366-201ENSMUST00000175022 89 ntBASIC37.71■■■■□ 3.63
Calhm4Q8CE93 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Calhm4Q8CE93 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.03■■■■□ 3.52
Calhm4Q8CE93 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.82■■■■□ 3.48
Calhm4Q8CE93 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Calhm4Q8CE93 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.61■■■■□ 3.45
Calhm4Q8CE93 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.37■■■■□ 3.41
Calhm4Q8CE93 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Calhm4Q8CE93 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.32■■■■□ 3.4
Calhm4Q8CE93 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.26■■■■□ 3.4
Calhm4Q8CE93 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Calhm4Q8CE93 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.25■■■■□ 3.39
Calhm4Q8CE93 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Calhm4Q8CE93 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Calhm4Q8CE93 Gm25238-201ENSMUST00000174914 89 ntBASIC35.91■■■■□ 3.34
Calhm4Q8CE93 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.33
Calhm4Q8CE93 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Calhm4Q8CE93 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Calhm4Q8CE93 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.8■■■■□ 3.32
Calhm4Q8CE93 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Calhm4Q8CE93 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.67■■■■□ 3.3
Calhm4Q8CE93 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.5■■■■□ 3.27
Calhm4Q8CE93 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.43■■■■□ 3.26
Calhm4Q8CE93 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Calhm4Q8CE93 Psd-208ENSMUST00000224556 2034 ntBASIC35.23■■■■□ 3.23
Calhm4Q8CE93 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
Calhm4Q8CE93 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35■■■■□ 3.19
Calhm4Q8CE93 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Calhm4Q8CE93 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.78■■■■□ 3.16
Calhm4Q8CE93 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Calhm4Q8CE93 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.74■■■■□ 3.15
Calhm4Q8CE93 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
Calhm4Q8CE93 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.55■■■■□ 3.12
Calhm4Q8CE93 Gm27325-201ENSMUST00000175467 74 ntBASIC34.53■■■■□ 3.12
Calhm4Q8CE93 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Calhm4Q8CE93 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Calhm4Q8CE93 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.33■■■■□ 3.09
Calhm4Q8CE93 Gm25262-201ENSMUST00000174934 133 ntBASIC34.29■■■■□ 3.08
Calhm4Q8CE93 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Calhm4Q8CE93 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Calhm4Q8CE93 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Calhm4Q8CE93 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Calhm4Q8CE93 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.04■■■■□ 3.04
Calhm4Q8CE93 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.98■■■■□ 3.03
Calhm4Q8CE93 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Calhm4Q8CE93 Rab21-202ENSMUST00000218831 843 ntBASIC33.94■■■■□ 3.02
Calhm4Q8CE93 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.93■■■■□ 3.02
Calhm4Q8CE93 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Calhm4Q8CE93 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
Calhm4Q8CE93 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.85■■■■□ 3.01
Calhm4Q8CE93 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.74■■■□□ 2.99
Calhm4Q8CE93 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.7■■■□□ 2.99
Calhm4Q8CE93 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.7■■■□□ 2.99
Calhm4Q8CE93 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Calhm4Q8CE93 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Calhm4Q8CE93 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.65■■■□□ 2.98
Calhm4Q8CE93 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Calhm4Q8CE93 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.59■■■□□ 2.97
Calhm4Q8CE93 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Calhm4Q8CE93 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Calhm4Q8CE93 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.49■■■□□ 2.95
Calhm4Q8CE93 Gm26115-201ENSMUST00000175605 87 ntBASIC33.48■■■□□ 2.95
Calhm4Q8CE93 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Calhm4Q8CE93 Gm8109-201ENSMUST00000194076 746 ntBASIC33.42■■■□□ 2.94
Calhm4Q8CE93 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Calhm4Q8CE93 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Calhm4Q8CE93 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Calhm4Q8CE93 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Calhm4Q8CE93 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Calhm4Q8CE93 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Calhm4Q8CE93 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Calhm4Q8CE93 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Calhm4Q8CE93 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
Calhm4Q8CE93 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.17■■■□□ 2.9
Calhm4Q8CE93 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.13■■■□□ 2.89
Calhm4Q8CE93 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.11■■■□□ 2.89
Calhm4Q8CE93 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Calhm4Q8CE93 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Calhm4Q8CE93 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Calhm4Q8CE93 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
Calhm4Q8CE93 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Calhm4Q8CE93 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Calhm4Q8CE93 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.94■■■□□ 2.86
Calhm4Q8CE93 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.89■■■□□ 2.86
Calhm4Q8CE93 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Calhm4Q8CE93 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.88■■■□□ 2.85
Calhm4Q8CE93 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Calhm4Q8CE93 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Calhm4Q8CE93 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.82■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms