Protein–RNA interactions for Protein: Q80TI0

Gramd1b, GRAM domain-containing protein 1B, mousemouse

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gramd1bQ80TI0 Gm25239-201ENSMUST00000174915 86 ntBASIC33.98■■■■□ 3.03
Gramd1bQ80TI0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Gramd1bQ80TI0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
Gramd1bQ80TI0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Gramd1bQ80TI0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Gramd1bQ80TI0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Gramd1bQ80TI0 Psd-208ENSMUST00000224556 2034 ntBASIC31.19■■■□□ 2.58
Gramd1bQ80TI0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gramd1bQ80TI0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Gramd1bQ80TI0 Gm15042-201ENSMUST00000120212 883 ntBASIC30.08■■■□□ 2.41
Gramd1bQ80TI0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Gramd1bQ80TI0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Gramd1bQ80TI0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Gramd1bQ80TI0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Gramd1bQ80TI0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Gramd1bQ80TI0 Gm15045-201ENSMUST00000117359 883 ntBASIC29.49■■■□□ 2.31
Gramd1bQ80TI0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Gramd1bQ80TI0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Gramd1bQ80TI0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Gramd1bQ80TI0 Gm24109-201ENSMUST00000175489 103 ntBASIC29.27■■■□□ 2.28
Gramd1bQ80TI0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Gramd1bQ80TI0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Gramd1bQ80TI0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Gramd1bQ80TI0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Gramd1bQ80TI0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.76■■■□□ 2.19
Gramd1bQ80TI0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Gramd1bQ80TI0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Gramd1bQ80TI0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Gramd1bQ80TI0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Gramd1bQ80TI0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Gramd1bQ80TI0 Gm23366-201ENSMUST00000175022 89 ntBASIC28.42■■■□□ 2.14
Gramd1bQ80TI0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Gramd1bQ80TI0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Gramd1bQ80TI0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Gramd1bQ80TI0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Gramd1bQ80TI0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.26■■■□□ 2.11
Gramd1bQ80TI0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gramd1bQ80TI0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.22■■■□□ 2.11
Gramd1bQ80TI0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Gramd1bQ80TI0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Gramd1bQ80TI0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.18■■■□□ 2.1
Gramd1bQ80TI0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Gramd1bQ80TI0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Gramd1bQ80TI0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
Gramd1bQ80TI0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Gramd1bQ80TI0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Gramd1bQ80TI0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Gramd1bQ80TI0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.97■■■□□ 2.07
Gramd1bQ80TI0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Gramd1bQ80TI0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Gramd1bQ80TI0 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.83■■■□□ 2.05
Gramd1bQ80TI0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Gramd1bQ80TI0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gramd1bQ80TI0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.77■■■□□ 2.04
Gramd1bQ80TI0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Gramd1bQ80TI0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Gramd1bQ80TI0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Gramd1bQ80TI0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Gramd1bQ80TI0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.62■■■□□ 2.01
Gramd1bQ80TI0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gramd1bQ80TI0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Gramd1bQ80TI0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Gramd1bQ80TI0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.29■■□□□ 1.96
Gramd1bQ80TI0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Gramd1bQ80TI0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.17■■□□□ 1.94
Gramd1bQ80TI0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Gramd1bQ80TI0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Gramd1bQ80TI0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Gramd1bQ80TI0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.07■■□□□ 1.92
Gramd1bQ80TI0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gramd1bQ80TI0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gramd1bQ80TI0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Gramd1bQ80TI0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Gramd1bQ80TI0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Gramd1bQ80TI0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Gramd1bQ80TI0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Gramd1bQ80TI0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Gramd1bQ80TI0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Gramd1bQ80TI0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Gramd1bQ80TI0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Gramd1bQ80TI0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.82■■□□□ 1.88
Gramd1bQ80TI0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Gramd1bQ80TI0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.78■■□□□ 1.88
Gramd1bQ80TI0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Gramd1bQ80TI0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Gramd1bQ80TI0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Gramd1bQ80TI0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Gramd1bQ80TI0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Gramd1bQ80TI0 Gm25238-201ENSMUST00000174914 89 ntBASIC26.7■■□□□ 1.86
Gramd1bQ80TI0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Gramd1bQ80TI0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.66■■□□□ 1.86
Gramd1bQ80TI0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.62■■□□□ 1.85
Gramd1bQ80TI0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Gramd1bQ80TI0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Gramd1bQ80TI0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Gramd1bQ80TI0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.57■■□□□ 1.84
Gramd1bQ80TI0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Gramd1bQ80TI0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Gramd1bQ80TI0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Gramd1bQ80TI0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms