Protein–RNA interactions for Protein: Q6DFV6

Fndc3c1, Fibronectin type III domain containing protein 3C1, mousemouse

Predictions only

Length 1,356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3c1Q6DFV6 Gm25239-201ENSMUST00000174915 86 ntBASIC45.71■■■■■ 4.91
Fndc3c1Q6DFV6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.55■■■■■ 4.4
Fndc3c1Q6DFV6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.82■■■■■ 4.29
Fndc3c1Q6DFV6 Gm24109-201ENSMUST00000175489 103 ntBASIC39.93■■■■□ 3.98
Fndc3c1Q6DFV6 Gm15042-201ENSMUST00000120212 883 ntBASIC39.44■■■■□ 3.9
Fndc3c1Q6DFV6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
Fndc3c1Q6DFV6 Gm15045-201ENSMUST00000117359 883 ntBASIC38.53■■■■□ 3.76
Fndc3c1Q6DFV6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
Fndc3c1Q6DFV6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Fndc3c1Q6DFV6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Fndc3c1Q6DFV6 Gm23366-201ENSMUST00000175022 89 ntBASIC38.1■■■■□ 3.69
Fndc3c1Q6DFV6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.38■■■■□ 3.57
Fndc3c1Q6DFV6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.03■■■■□ 3.52
Fndc3c1Q6DFV6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Fndc3c1Q6DFV6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.01■■■■□ 3.51
Fndc3c1Q6DFV6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Fndc3c1Q6DFV6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Fndc3c1Q6DFV6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Fndc3c1Q6DFV6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Fndc3c1Q6DFV6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.47■■■■□ 3.43
Fndc3c1Q6DFV6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Fndc3c1Q6DFV6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Fndc3c1Q6DFV6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.3■■■■□ 3.4
Fndc3c1Q6DFV6 Gm25238-201ENSMUST00000174914 89 ntBASIC36.27■■■■□ 3.4
Fndc3c1Q6DFV6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.32
Fndc3c1Q6DFV6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
Fndc3c1Q6DFV6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.59■■■■□ 3.29
Fndc3c1Q6DFV6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.52■■■■□ 3.28
Fndc3c1Q6DFV6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Fndc3c1Q6DFV6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Fndc3c1Q6DFV6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Fndc3c1Q6DFV6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Fndc3c1Q6DFV6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
Fndc3c1Q6DFV6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.13■■■■□ 3.21
Fndc3c1Q6DFV6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.12■■■■□ 3.21
Fndc3c1Q6DFV6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.07■■■■□ 3.2
Fndc3c1Q6DFV6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.01■■■■□ 3.2
Fndc3c1Q6DFV6 Gm25262-201ENSMUST00000174934 133 ntBASIC34.98■■■■□ 3.19
Fndc3c1Q6DFV6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.97■■■■□ 3.19
Fndc3c1Q6DFV6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Fndc3c1Q6DFV6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Fndc3c1Q6DFV6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.6■■■■□ 3.13
Fndc3c1Q6DFV6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.59■■■■□ 3.13
Fndc3c1Q6DFV6 Gm27325-201ENSMUST00000175467 74 ntBASIC34.46■■■■□ 3.11
Fndc3c1Q6DFV6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.42■■■■□ 3.1
Fndc3c1Q6DFV6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Fndc3c1Q6DFV6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
Fndc3c1Q6DFV6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Fndc3c1Q6DFV6 Gm26115-201ENSMUST00000175605 87 ntBASIC34.33■■■■□ 3.09
Fndc3c1Q6DFV6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.09
Fndc3c1Q6DFV6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.24■■■■□ 3.07
Fndc3c1Q6DFV6 Rab21-202ENSMUST00000218831 843 ntBASIC34.2■■■■□ 3.07
Fndc3c1Q6DFV6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.15■■■■□ 3.06
Fndc3c1Q6DFV6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.13■■■■□ 3.05
Fndc3c1Q6DFV6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Fndc3c1Q6DFV6 Gm8109-201ENSMUST00000194076 746 ntBASIC34.1■■■■□ 3.05
Fndc3c1Q6DFV6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Fndc3c1Q6DFV6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Fndc3c1Q6DFV6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
Fndc3c1Q6DFV6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Fndc3c1Q6DFV6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Fndc3c1Q6DFV6 Psd-208ENSMUST00000224556 2034 ntBASIC33.78■■■■□ 3
Fndc3c1Q6DFV6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.78■■■■□ 3
Fndc3c1Q6DFV6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.7■■■□□ 2.98
Fndc3c1Q6DFV6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.59■■■□□ 2.97
Fndc3c1Q6DFV6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
Fndc3c1Q6DFV6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.56■■■□□ 2.96
Fndc3c1Q6DFV6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.54■■■□□ 2.96
Fndc3c1Q6DFV6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Fndc3c1Q6DFV6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.32■■■□□ 2.92
Fndc3c1Q6DFV6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Fndc3c1Q6DFV6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Fndc3c1Q6DFV6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Fndc3c1Q6DFV6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.24■■■□□ 2.91
Fndc3c1Q6DFV6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.22■■■□□ 2.91
Fndc3c1Q6DFV6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Fndc3c1Q6DFV6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Fndc3c1Q6DFV6 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.16■■■□□ 2.9
Fndc3c1Q6DFV6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Fndc3c1Q6DFV6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Fndc3c1Q6DFV6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.08■■■□□ 2.89
Fndc3c1Q6DFV6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Fndc3c1Q6DFV6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Fndc3c1Q6DFV6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Fndc3c1Q6DFV6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Fndc3c1Q6DFV6 Gm24804-201ENSMUST00000174982 85 ntBASIC32.98■■■□□ 2.87
Fndc3c1Q6DFV6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.82■■■□□ 2.84
Fndc3c1Q6DFV6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Fndc3c1Q6DFV6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Fndc3c1Q6DFV6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Fndc3c1Q6DFV6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
Fndc3c1Q6DFV6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Fndc3c1Q6DFV6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.7■■■□□ 2.83
Fndc3c1Q6DFV6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Fndc3c1Q6DFV6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.67■■■□□ 2.82
Fndc3c1Q6DFV6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.67■■■□□ 2.82
Fndc3c1Q6DFV6 Gm27322-201ENSMUST00000184007 104 ntBASIC32.66■■■□□ 2.82
Fndc3c1Q6DFV6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
Fndc3c1Q6DFV6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.59■■■□□ 2.81
Fndc3c1Q6DFV6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms