Protein–RNA interactions for Protein: A0A1C7CYV3

Zscan4-ps1, MCG113245, isoform CRA_a, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zscan4-ps1A0A1C7CYV3 Gm25239-201ENSMUST00000174915 86 ntBASIC43.26■■■■■ 4.52
Zscan4-ps1A0A1C7CYV3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
Zscan4-ps1A0A1C7CYV3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Zscan4-ps1A0A1C7CYV3 Gm24109-201ENSMUST00000175489 103 ntBASIC37.78■■■■□ 3.64
Zscan4-ps1A0A1C7CYV3 Gm15042-201ENSMUST00000120212 883 ntBASIC37.28■■■■□ 3.56
Zscan4-ps1A0A1C7CYV3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
Zscan4-ps1A0A1C7CYV3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Zscan4-ps1A0A1C7CYV3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
Zscan4-ps1A0A1C7CYV3 Gm15045-201ENSMUST00000117359 883 ntBASIC36.33■■■■□ 3.41
Zscan4-ps1A0A1C7CYV3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Zscan4-ps1A0A1C7CYV3 Gm23366-201ENSMUST00000175022 89 ntBASIC36.06■■■■□ 3.36
Zscan4-ps1A0A1C7CYV3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Zscan4-ps1A0A1C7CYV3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.43■■■■□ 3.26
Zscan4-ps1A0A1C7CYV3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.11■■■■□ 3.21
Zscan4-ps1A0A1C7CYV3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Zscan4-ps1A0A1C7CYV3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.04■■■■□ 3.2
Zscan4-ps1A0A1C7CYV3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Zscan4-ps1A0A1C7CYV3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Zscan4-ps1A0A1C7CYV3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
Zscan4-ps1A0A1C7CYV3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Zscan4-ps1A0A1C7CYV3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
Zscan4-ps1A0A1C7CYV3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Zscan4-ps1A0A1C7CYV3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.38■■■■□ 3.09
Zscan4-ps1A0A1C7CYV3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Zscan4-ps1A0A1C7CYV3 Gm25238-201ENSMUST00000174914 89 ntBASIC34.31■■■■□ 3.08
Zscan4-ps1A0A1C7CYV3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Zscan4-ps1A0A1C7CYV3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.59■■■□□ 2.97
Zscan4-ps1A0A1C7CYV3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Zscan4-ps1A0A1C7CYV3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Zscan4-ps1A0A1C7CYV3 Psd-208ENSMUST00000224556 2034 ntBASIC33.52■■■□□ 2.96
Zscan4-ps1A0A1C7CYV3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Zscan4-ps1A0A1C7CYV3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.93
Zscan4-ps1A0A1C7CYV3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Zscan4-ps1A0A1C7CYV3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.24■■■□□ 2.91
Zscan4-ps1A0A1C7CYV3 Gm25262-201ENSMUST00000174934 133 ntBASIC33.17■■■□□ 2.9
Zscan4-ps1A0A1C7CYV3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.12■■■□□ 2.89
Zscan4-ps1A0A1C7CYV3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.11■■■□□ 2.89
Zscan4-ps1A0A1C7CYV3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.89
Zscan4-ps1A0A1C7CYV3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Zscan4-ps1A0A1C7CYV3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Zscan4-ps1A0A1C7CYV3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Zscan4-ps1A0A1C7CYV3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Zscan4-ps1A0A1C7CYV3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.8■■■□□ 2.84
Zscan4-ps1A0A1C7CYV3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.69■■■□□ 2.82
Zscan4-ps1A0A1C7CYV3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.65■■■□□ 2.82
Zscan4-ps1A0A1C7CYV3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.63■■■□□ 2.81
Zscan4-ps1A0A1C7CYV3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.57■■■□□ 2.8
Zscan4-ps1A0A1C7CYV3 Gm27325-201ENSMUST00000175467 74 ntBASIC32.56■■■□□ 2.8
Zscan4-ps1A0A1C7CYV3 Gm26115-201ENSMUST00000175605 87 ntBASIC32.56■■■□□ 2.8
Zscan4-ps1A0A1C7CYV3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Zscan4-ps1A0A1C7CYV3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
Zscan4-ps1A0A1C7CYV3 Rab21-202ENSMUST00000218831 843 ntBASIC32.33■■■□□ 2.77
Zscan4-ps1A0A1C7CYV3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.33■■■□□ 2.77
Zscan4-ps1A0A1C7CYV3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Zscan4-ps1A0A1C7CYV3 Gm8109-201ENSMUST00000194076 746 ntBASIC32.31■■■□□ 2.76
Zscan4-ps1A0A1C7CYV3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Zscan4-ps1A0A1C7CYV3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Zscan4-ps1A0A1C7CYV3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Zscan4-ps1A0A1C7CYV3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Zscan4-ps1A0A1C7CYV3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Zscan4-ps1A0A1C7CYV3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Zscan4-ps1A0A1C7CYV3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Zscan4-ps1A0A1C7CYV3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Zscan4-ps1A0A1C7CYV3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Zscan4-ps1A0A1C7CYV3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Zscan4-ps1A0A1C7CYV3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.89■■■□□ 2.7
Zscan4-ps1A0A1C7CYV3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.87■■■□□ 2.69
Zscan4-ps1A0A1C7CYV3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Zscan4-ps1A0A1C7CYV3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Zscan4-ps1A0A1C7CYV3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.75■■■□□ 2.67
Zscan4-ps1A0A1C7CYV3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.75■■■□□ 2.67
Zscan4-ps1A0A1C7CYV3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Zscan4-ps1A0A1C7CYV3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Zscan4-ps1A0A1C7CYV3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Zscan4-ps1A0A1C7CYV3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Zscan4-ps1A0A1C7CYV3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.51■■■□□ 2.63
Zscan4-ps1A0A1C7CYV3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Zscan4-ps1A0A1C7CYV3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Zscan4-ps1A0A1C7CYV3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Zscan4-ps1A0A1C7CYV3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.41■■■□□ 2.62
Zscan4-ps1A0A1C7CYV3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Zscan4-ps1A0A1C7CYV3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Zscan4-ps1A0A1C7CYV3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Zscan4-ps1A0A1C7CYV3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Zscan4-ps1A0A1C7CYV3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Zscan4-ps1A0A1C7CYV3 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.28■■■□□ 2.6
Zscan4-ps1A0A1C7CYV3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Zscan4-ps1A0A1C7CYV3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.26■■■□□ 2.59
Zscan4-ps1A0A1C7CYV3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Zscan4-ps1A0A1C7CYV3 Gm24804-201ENSMUST00000174982 85 ntBASIC31.18■■■□□ 2.58
Zscan4-ps1A0A1C7CYV3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.14■■■□□ 2.58
Zscan4-ps1A0A1C7CYV3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Zscan4-ps1A0A1C7CYV3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.08■■■□□ 2.57
Zscan4-ps1A0A1C7CYV3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
Zscan4-ps1A0A1C7CYV3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.02■■■□□ 2.56
Zscan4-ps1A0A1C7CYV3 Gm27322-201ENSMUST00000184007 104 ntBASIC31.01■■■□□ 2.55
Zscan4-ps1A0A1C7CYV3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.96■■■□□ 2.55
Zscan4-ps1A0A1C7CYV3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Zscan4-ps1A0A1C7CYV3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Zscan4-ps1A0A1C7CYV3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.88■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms