Protein–RNA interactions for Protein: Q3TR54

Gsdmc4, Gasdermin-C4, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gsdmc4Q3TR54 Gm25239-201ENSMUST00000174915 86 ntBASIC39.8■■■■□ 3.96
Gsdmc4Q3TR54 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
Gsdmc4Q3TR54 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Gsdmc4Q3TR54 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Gsdmc4Q3TR54 Gm15042-201ENSMUST00000120212 883 ntBASIC34.98■■■■□ 3.19
Gsdmc4Q3TR54 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Gsdmc4Q3TR54 Gm24109-201ENSMUST00000175489 103 ntBASIC34.42■■■■□ 3.1
Gsdmc4Q3TR54 Gm15045-201ENSMUST00000117359 883 ntBASIC34.29■■■■□ 3.08
Gsdmc4Q3TR54 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.06
Gsdmc4Q3TR54 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Gsdmc4Q3TR54 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
Gsdmc4Q3TR54 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Gsdmc4Q3TR54 Gm23366-201ENSMUST00000175022 89 ntBASIC33.24■■■□□ 2.91
Gsdmc4Q3TR54 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Gsdmc4Q3TR54 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Gsdmc4Q3TR54 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.88■■■□□ 2.85
Gsdmc4Q3TR54 Psd-208ENSMUST00000224556 2034 ntBASIC32.65■■■□□ 2.82
Gsdmc4Q3TR54 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Gsdmc4Q3TR54 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Gsdmc4Q3TR54 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Gsdmc4Q3TR54 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Gsdmc4Q3TR54 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Gsdmc4Q3TR54 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Gsdmc4Q3TR54 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Gsdmc4Q3TR54 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Gsdmc4Q3TR54 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
Gsdmc4Q3TR54 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Gsdmc4Q3TR54 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.15■■■□□ 2.74
Gsdmc4Q3TR54 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.1■■■□□ 2.73
Gsdmc4Q3TR54 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Gsdmc4Q3TR54 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.84■■■□□ 2.69
Gsdmc4Q3TR54 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Gsdmc4Q3TR54 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Gsdmc4Q3TR54 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.63■■■□□ 2.65
Gsdmc4Q3TR54 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Gsdmc4Q3TR54 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.56■■■□□ 2.64
Gsdmc4Q3TR54 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gsdmc4Q3TR54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Gsdmc4Q3TR54 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Gsdmc4Q3TR54 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Gsdmc4Q3TR54 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Gsdmc4Q3TR54 Gm25238-201ENSMUST00000174914 89 ntBASIC31.37■■■□□ 2.61
Gsdmc4Q3TR54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.27■■■□□ 2.6
Gsdmc4Q3TR54 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.03■■■□□ 2.56
Gsdmc4Q3TR54 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Gsdmc4Q3TR54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gsdmc4Q3TR54 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gsdmc4Q3TR54 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Gsdmc4Q3TR54 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Gsdmc4Q3TR54 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Gsdmc4Q3TR54 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.8■■■□□ 2.52
Gsdmc4Q3TR54 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
Gsdmc4Q3TR54 Gm27325-201ENSMUST00000175467 74 ntBASIC30.72■■■□□ 2.51
Gsdmc4Q3TR54 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.72■■■□□ 2.51
Gsdmc4Q3TR54 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Gsdmc4Q3TR54 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Gsdmc4Q3TR54 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Gsdmc4Q3TR54 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Gsdmc4Q3TR54 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.42■■■□□ 2.46
Gsdmc4Q3TR54 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.42■■■□□ 2.46
Gsdmc4Q3TR54 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Gsdmc4Q3TR54 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.36■■■□□ 2.45
Gsdmc4Q3TR54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.32■■■□□ 2.44
Gsdmc4Q3TR54 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
Gsdmc4Q3TR54 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
Gsdmc4Q3TR54 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gsdmc4Q3TR54 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Gsdmc4Q3TR54 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gsdmc4Q3TR54 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gsdmc4Q3TR54 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gsdmc4Q3TR54 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Gsdmc4Q3TR54 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Gsdmc4Q3TR54 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Gsdmc4Q3TR54 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gsdmc4Q3TR54 Rab21-202ENSMUST00000218831 843 ntBASIC30■■■□□ 2.39
Gsdmc4Q3TR54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Gsdmc4Q3TR54 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Gsdmc4Q3TR54 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Gsdmc4Q3TR54 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.96■■■□□ 2.39
Gsdmc4Q3TR54 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.94■■■□□ 2.38
Gsdmc4Q3TR54 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.92■■■□□ 2.38
Gsdmc4Q3TR54 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Gsdmc4Q3TR54 Gm25262-201ENSMUST00000174934 133 ntBASIC29.88■■■□□ 2.37
Gsdmc4Q3TR54 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Gsdmc4Q3TR54 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.87■■■□□ 2.37
Gsdmc4Q3TR54 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Gsdmc4Q3TR54 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Gsdmc4Q3TR54 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Gsdmc4Q3TR54 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Gsdmc4Q3TR54 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.63■■■□□ 2.33
Gsdmc4Q3TR54 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Gsdmc4Q3TR54 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.58■■■□□ 2.33
Gsdmc4Q3TR54 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Gsdmc4Q3TR54 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Gsdmc4Q3TR54 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Gsdmc4Q3TR54 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Gsdmc4Q3TR54 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gsdmc4Q3TR54 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.4■■■□□ 2.3
Gsdmc4Q3TR54 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Gsdmc4Q3TR54 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms