RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeastyeast

Gene CSM4, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM4YPL200W RPO31P04051 1460 aa-1.05□□□□□ -2.58
CSM4YPL200W YOL166W-AQ8TGJ1 51 aa-1.05□□□□□ -2.58
CSM4YPL200W CUP1-1P0CX80 61 aa-1.06□□□□□ -2.58
CSM4YPL200W CUP1-2P0CX81 61 aa-1.06□□□□□ -2.58
CSM4YPL200W NUP159P40477 1460 aa-1.06□□□□□ -2.58
CSM4YPL200W YML054C-AQ3E809 52 aa-1.08□□□□□ -2.58
CSM4YPL200W SKI3P17883 1432 aaKnown RBP-1.11□□□□□ -2.59
CSM4YPL200W YDR034C-AP0C289 58 aa-1.11□□□□□ -2.59
CSM4YPL200W YIL102C-AQ2V2P5 75 aa-1.11□□□□□ -2.59
CSM4YPL200W PAI3P01094 68 aa-1.12□□□□□ -2.59
CSM4YPL200W RPL29P05747 59 aaPredicted RBP-1.12□□□□□ -2.59
CSM4YPL200W IRA1P18963 3092 aa-1.12□□□□□ -2.59
CSM4YPL200W SCC2Q04002 1493 aa-1.12□□□□□ -2.59
CSM4YPL200W YOR316C-AQ3E806 69 aa-1.13□□□□□ -2.59
CSM4YPL200W PDR5P33302 1511 aaKnown RBP-1.14□□□□□ -2.59
CSM4YPL200W FLO1P32768 1537 aa-1.15□□□□□ -2.59
CSM4YPL200W TCB3Q03640 1545 aaKnown RBP-1.15□□□□□ -2.59
CSM4YPL200W YBT1P32386 1661 aa-1.16□□□□□ -2.59
CSM4YPL200W YPR010C-AA5Z2X5 72 aa-1.18□□□□□ -2.6
CSM4YPL200W NUP188P52593 1655 aaKnown RBP-1.19□□□□□ -2.6
CSM4YPL200W MYO4P32492 1471 aa-1.19□□□□□ -2.6
CSM4YPL200W YCF1P39109 1515 aaKnown RBP-1.2□□□□□ -2.6
CSM4YPL200W TRA1P38811 3744 aa-1.22□□□□□ -2.6
CSM4YPL200W SSK2P53599 1579 aa-1.22□□□□□ -2.61
CSM4YPL200W IRA2P19158 3079 aa-1.25□□□□□ -2.61
CSM4YPL200W GCN2P15442 1659 aa-1.25□□□□□ -2.61
CSM4YPL200W YMR105W-AQ8TGS8 64 aa-1.27□□□□□ -2.61
CSM4YPL200W BUD3P25558 1636 aa-1.29□□□□□ -2.62
CSM4YPL200W YJL133C-AQ3E7A3 74 aa-1.3□□□□□ -2.62
CSM4YPL200W YHR073W-AP0C5N7 58 aa-1.31□□□□□ -2.62
CSM4YPL200W VMA9Q3E7B6 73 aa-1.31□□□□□ -2.62
CSM4YPL200W ATG2P53855 1592 aa-1.31□□□□□ -2.62
CSM4YPL200W STU1P38198 1513 aa-1.32□□□□□ -2.62
CSM4YPL200W CDC25P04821 1589 aa-1.33□□□□□ -2.62
CSM4YPL200W DDR2P89113 61 aa-1.33□□□□□ -2.62
CSM4YPL200W YKL023C-AQ2V2P3 75 aa-1.33□□□□□ -2.62
CSM4YPL200W ULS1Q08562 1619 aa-1.34□□□□□ -2.62
CSM4YPL200W COX9P07255 59 aa-1.35□□□□□ -2.63
CSM4YPL200W USO1P25386 1790 aa-1.35□□□□□ -2.63
CSM4YPL200W VPS13Q07878 3144 aa-1.38□□□□□ -2.63
CSM4YPL200W NUP192P47054 1683 aa-1.39□□□□□ -2.63
CSM4YPL200W HIR3P47171 1648 aa-1.4□□□□□ -2.63
CSM4YPL200W NUP170P38181 1502 aa-1.41□□□□□ -2.64
CSM4YPL200W YLR342W-AQ3E810 57 aa-1.42□□□□□ -2.64
CSM4YPL200W YFR010W-AP0C5N0 62 aa-1.43□□□□□ -2.64
CSM4YPL200W PEP1P32319 1579 aa-1.46□□□□□ -2.64
CSM4YPL200W YJL127C-BQ3E828 52 aa-1.5□□□□□ -2.65
CSM4YPL200W TOM1Q03280 3268 aa-1.51□□□□□ -2.65
CSM4YPL200W RKR1Q04781 1562 aa-1.53□□□□□ -2.65
CSM4YPL200W SPT6P23615 1451 aaKnown RBP-1.54□□□□□ -2.66
CSM4YPL200W PMP3P87284 55 aa-1.57□□□□□ -2.66
CSM4YPL200W SMX2P40204 77 aaKnown RBP-1.58□□□□□ -2.66
CSM4YPL200W MON2P48563 1636 aaPredicted RBP-1.67□□□□□ -2.68
CSM4YPL200W YLL066W-BQ8TGJ7 56 aa-1.68□□□□□ -2.68
CSM4YPL200W HOR7Q05827 59 aa-1.7□□□□□ -2.68
CSM4YPL200W CHC1P22137 1653 aaKnown RBP-1.73□□□□□ -2.69
CSM4YPL200W MLP2P40457 1679 aa-1.8□□□□□ -2.7
CSM4YPL200W TOM7P53507 60 aa-1.85□□□□□ -2.71
CSM4YPL200W NCE101Q02820 53 aa-2.06□□□□□ -2.74
CSM4YPL200W Q0297Q9ZZV8 51 aa-2.19□□□□□ -2.76
CSM4YPL200W RPL39P04650 51 aa-2.29□□□□□ -2.78
CSM4YPL200W YIL046W-AQ3E7Z4 54 aa-2.37□□□□□ -2.79
CSM4YPL200W YDR034W-BQ6Q5X2 51 aa-2.37□□□□□ -2.79
Retrieved 63 of 5,963 RNA–protein pairs in 80.1 ms