RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C UTP20P35194 2493 aaKnown RBP0.36□□□□□ -2.35
CUP9YPL177C USO1P25386 1790 aa0.35□□□□□ -2.35
CUP9YPL177C CUP1-1P0CX80 61 aa0.35□□□□□ -2.35
CUP9YPL177C CUP1-2P0CX81 61 aa0.35□□□□□ -2.35
CUP9YPL177C YCR108CQ3E819 63 aa0.35□□□□□ -2.35
CUP9YPL177C FIG2P25653 1609 aa0.35□□□□□ -2.35
CUP9YPL177C OLI1P61829 76 aa0.34□□□□□ -2.36
CUP9YPL177C YBR230W-AQ3E762 66 aa0.34□□□□□ -2.36
CUP9YPL177C NUP192P47054 1683 aa0.33□□□□□ -2.36
CUP9YPL177C THO2P53552 1597 aaKnown RBP0.33□□□□□ -2.36
CUP9YPL177C BUD3P25558 1636 aa0.32□□□□□ -2.36
CUP9YPL177C YPR010C-AA5Z2X5 72 aa0.31□□□□□ -2.36
CUP9YPL177C TOS6P48560 102 aa0.31□□□□□ -2.36
CUP9YPL177C YGR146C-AQ8TGT9 53 aa0.31□□□□□ -2.36
CUP9YPL177C RKR1Q04781 1562 aa0.3□□□□□ -2.36
CUP9YPL177C HIR3P47171 1648 aa0.3□□□□□ -2.36
CUP9YPL177C NUP170P38181 1502 aa0.28□□□□□ -2.36
CUP9YPL177C SIP18P50263 79 aa0.27□□□□□ -2.37
CUP9YPL177C ATG2P53855 1592 aa0.26□□□□□ -2.37
CUP9YPL177C SMX2P40204 77 aaKnown RBP0.25□□□□□ -2.37
CUP9YPL177C YOR008C-AQ3E7B9 74 aa0.25□□□□□ -2.37
CUP9YPL177C MLP2P40457 1679 aa0.23□□□□□ -2.37
CUP9YPL177C RPS29AP41057 56 aaKnown RBP0.22□□□□□ -2.37
CUP9YPL177C IRA2P19158 3079 aa0.22□□□□□ -2.37
CUP9YPL177C GCN2P15442 1659 aa0.21□□□□□ -2.38
CUP9YPL177C CHC1P22137 1653 aaKnown RBP0.21□□□□□ -2.38
CUP9YPL177C TOR2P32600 2474 aaKnown RBP0.21□□□□□ -2.38
CUP9YPL177C YDR524C-BQ3E6R4 66 aa0.19□□□□□ -2.38
CUP9YPL177C YLL006W-AQ3E814 58 aa0.19□□□□□ -2.38
CUP9YPL177C VPS13Q07878 3144 aa0.19□□□□□ -2.38
CUP9YPL177C YOR316C-AQ3E806 69 aa0.16□□□□□ -2.38
CUP9YPL177C YLR342W-AQ3E810 57 aa0.16□□□□□ -2.38
CUP9YPL177C YJL133C-AQ3E7A3 74 aa0.15□□□□□ -2.39
CUP9YPL177C YOR072W-BQ3E832 53 aa0.15□□□□□ -2.39
CUP9YPL177C TEL1P38110 2787 aa0.15□□□□□ -2.39
CUP9YPL177C FLO1P32768 1537 aa0.14□□□□□ -2.39
CUP9YPL177C MEC1P38111 2368 aa0.13□□□□□ -2.39
CUP9YPL177C DDR2P89113 61 aa0.13□□□□□ -2.39
CUP9YPL177C COA2Q3E823 68 aa0.13□□□□□ -2.39
CUP9YPL177C TOM1Q03280 3268 aa0.13□□□□□ -2.39
CUP9YPL177C YGL258W-AQ3E740 77 aa0.11□□□□□ -2.39
CUP9YPL177C CSF1Q12150 2958 aa0.1□□□□□ -2.39
CUP9YPL177C TRA1P38811 3744 aa0.09□□□□□ -2.39
CUP9YPL177C COX9P07255 59 aa0.09□□□□□ -2.4
CUP9YPL177C RPL29P05747 59 aaPredicted RBP0.07□□□□□ -2.4
CUP9YPL177C YDR034C-AP0C289 58 aa0.07□□□□□ -2.4
CUP9YPL177C DYN1P36022 4092 aa0.07□□□□□ -2.4
CUP9YPL177C YHR073W-AP0C5N7 58 aa0.05□□□□□ -2.4
CUP9YPL177C TOM7P53507 60 aa0.05□□□□□ -2.4
CUP9YPL177C IRA1P18963 3092 aa0.03□□□□□ -2.4
CUP9YPL177C YHR050W-AQ05451 56 aa0.03□□□□□ -2.4
CUP9YPL177C YJL127C-BQ3E828 52 aa0.02□□□□□ -2.41
CUP9YPL177C Q0017Q9ZZX8 53 aa-0.03□□□□□ -2.41
CUP9YPL177C YML054C-AQ3E809 52 aa-0.08□□□□□ -2.42
CUP9YPL177C HOR7Q05827 59 aa-0.1□□□□□ -2.43
CUP9YPL177C PMP3P87284 55 aa-0.13□□□□□ -2.43
CUP9YPL177C NCE101Q02820 53 aa-0.17□□□□□ -2.44
CUP9YPL177C YLL066W-BQ8TGJ7 56 aa-0.21□□□□□ -2.44
CUP9YPL177C YMR105W-AQ8TGS8 64 aa-0.29□□□□□ -2.46
CUP9YPL177C RPL39P04650 51 aa-0.39□□□□□ -2.47
CUP9YPL177C YIL046W-AQ3E7Z4 54 aa-0.48□□□□□ -2.49
CUP9YPL177C YDR034W-BQ6Q5X2 51 aa-0.55□□□□□ -2.5
CUP9YPL177C Q0297Q9ZZV8 51 aa-0.68□□□□□ -2.52
Retrieved 63 of 5,963 RNA–protein pairs in 10.4 ms