RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	VMR1	P38735	1592 aa		-0.9	□□□□□ -2.55
LEE1	YPL054W	RPO31	P04051	1460 aa		-0.9	□□□□□ -2.55
LEE1	YPL054W	UFD4	P33202	1483 aa		-0.9	□□□□□ -2.55
LEE1	YPL054W	IRA2	P19158	3079 aa		-0.9	□□□□□ -2.55
LEE1	YPL054W	YSY6	P38374	65 aa		-0.91	□□□□□ -2.56
LEE1	YPL054W	YOR316C-A	Q3E806	69 aa		-0.91	□□□□□ -2.56
LEE1	YPL054W	YFL041W-A	Q3E817	63 aa		-0.91	□□□□□ -2.56
LEE1	YPL054W	PDR5	P33302	1511 aa	Known RBP	-0.91	□□□□□ -2.56
LEE1	YPL054W	DOP1	Q03921	1698 aa		-0.92	□□□□□ -2.56
LEE1	YPL054W	TRA1	P38811	3744 aa		-0.93	□□□□□ -2.56
LEE1	YPL054W	BCK1	Q01389	1478 aa		-0.93	□□□□□ -2.56
LEE1	YPL054W	NUP188	P52593	1655 aa	Known RBP	-0.94	□□□□□ -2.56
LEE1	YPL054W	FLO1	P32768	1537 aa		-0.94	□□□□□ -2.56
LEE1	YPL054W	YOL166W-A	Q8TGJ1	51 aa		-0.96	□□□□□ -2.56
LEE1	YPL054W	GCN2	P15442	1659 aa		-0.97	□□□□□ -2.56
LEE1	YPL054W	YBT1	P32386	1661 aa		-0.97	□□□□□ -2.56
LEE1	YPL054W	YHR213W-A	Q8TGT4	77 aa		-0.97	□□□□□ -2.56
LEE1	YPL054W	YCF1	P39109	1515 aa	Known RBP	-0.98	□□□□□ -2.57
LEE1	YPL054W	TCB3	Q03640	1545 aa	Known RBP	-0.98	□□□□□ -2.57
LEE1	YPL054W	YIL102C-A	Q2V2P5	75 aa		-0.98	□□□□□ -2.57
LEE1	YPL054W	PAI3	P01094	68 aa		-0.99	□□□□□ -2.57
LEE1	YPL054W	YPR010C-A	A5Z2X5	72 aa		-1.01	□□□□□ -2.57
LEE1	YPL054W	VPS13	Q07878	3144 aa		-1.02	□□□□□ -2.57
LEE1	YPL054W	YHR073W-A	P0C5N7	58 aa		-1.02	□□□□□ -2.57
LEE1	YPL054W	SCC2	Q04002	1493 aa		-1.02	□□□□□ -2.57
LEE1	YPL054W	SSK2	P53599	1579 aa		-1.03	□□□□□ -2.57
LEE1	YPL054W	NUP159	P40477	1460 aa		-1.03	□□□□□ -2.57
LEE1	YPL054W	YJL133C-A	Q3E7A3	74 aa		-1.03	□□□□□ -2.57
LEE1	YPL054W	ULS1	Q08562	1619 aa		-1.04	□□□□□ -2.58
LEE1	YPL054W	COX9	P07255	59 aa		-1.04	□□□□□ -2.58
LEE1	YPL054W	MYO4	P32492	1471 aa		-1.05	□□□□□ -2.58
LEE1	YPL054W	SKI3	P17883	1432 aa	Known RBP	-1.06	□□□□□ -2.58
LEE1	YPL054W	STU1	P38198	1513 aa		-1.07	□□□□□ -2.58
LEE1	YPL054W	DDR2	P89113	61 aa		-1.08	□□□□□ -2.58
LEE1	YPL054W	USO1	P25386	1790 aa		-1.09	□□□□□ -2.58
LEE1	YPL054W	BUD3	P25558	1636 aa		-1.1	□□□□□ -2.59
LEE1	YPL054W	ATG2	P53855	1592 aa		-1.1	□□□□□ -2.59
LEE1	YPL054W	CDC25	P04821	1589 aa		-1.11	□□□□□ -2.59
LEE1	YPL054W	HIR3	P47171	1648 aa		-1.15	□□□□□ -2.59
LEE1	YPL054W	VMA9	Q3E7B6	73 aa		-1.15	□□□□□ -2.59
LEE1	YPL054W	NUP192	P47054	1683 aa		-1.16	□□□□□ -2.6
LEE1	YPL054W	YKL023C-A	Q2V2P3	75 aa		-1.17	□□□□□ -2.6
LEE1	YPL054W	YLR342W-A	Q3E810	57 aa		-1.17	□□□□□ -2.6
LEE1	YPL054W	NUP170	P38181	1502 aa		-1.2	□□□□□ -2.6
LEE1	YPL054W	YJL127C-B	Q3E828	52 aa		-1.2	□□□□□ -2.6
LEE1	YPL054W	PMP3	P87284	55 aa		-1.21	□□□□□ -2.6
LEE1	YPL054W	PEP1	P32319	1579 aa		-1.24	□□□□□ -2.61
LEE1	YPL054W	SMX2	P40204	77 aa	Known RBP	-1.26	□□□□□ -2.61
LEE1	YPL054W	RKR1	Q04781	1562 aa		-1.27	□□□□□ -2.61
LEE1	YPL054W	MON2	P48563	1636 aa	Predicted RBP	-1.28	□□□□□ -2.61
LEE1	YPL054W	YFR010W-A	P0C5N0	62 aa		-1.32	□□□□□ -2.62
LEE1	YPL054W	YLL066W-B	Q8TGJ7	56 aa		-1.34	□□□□□ -2.62
LEE1	YPL054W	SPT6	P23615	1451 aa	Known RBP	-1.36	□□□□□ -2.63
LEE1	YPL054W	HOR7	Q05827	59 aa		-1.36	□□□□□ -2.63
LEE1	YPL054W	CHC1	P22137	1653 aa	Known RBP	-1.36	□□□□□ -2.63
LEE1	YPL054W	TOM1	Q03280	3268 aa		-1.41	□□□□□ -2.63
LEE1	YPL054W	MLP2	P40457	1679 aa		-1.43	□□□□□ -2.64
LEE1	YPL054W	TOM7	P53507	60 aa		-1.47	□□□□□ -2.64
LEE1	YPL054W	NCE101	Q02820	53 aa		-1.66	□□□□□ -2.68
LEE1	YPL054W	RPL39	P04650	51 aa		-1.84	□□□□□ -2.7
LEE1	YPL054W	Q0297	Q9ZZV8	51 aa		-1.94	□□□□□ -2.72
LEE1	YPL054W	YIL046W-A	Q3E7Z4	54 aa		-2.11	□□□□□ -2.75
LEE1	YPL054W	YDR034W-B	Q6Q5X2	51 aa		-2.56	□□□□□ -2.82

Retrieved 63 of 5,963 RNA–protein pairs in 73.3 ms