RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W CDC25P04821 1589 aa-0.11□□□□□ -2.43
HSH49YOR319W NUP188P52593 1655 aaKnown RBP-0.18□□□□□ -2.44
HSH49YOR319W YPR010C-AA5Z2X5 72 aa-0.2□□□□□ -2.44
HSH49YOR319W YHR050W-AQ05451 56 aa-0.22□□□□□ -2.44
HSH49YOR319W SPT6P23615 1451 aaKnown RBP-0.24□□□□□ -2.45
HSH49YOR319W SSK2P53599 1579 aa-0.24□□□□□ -2.45
HSH49YOR319W USO1P25386 1790 aa-0.25□□□□□ -2.45
HSH49YOR319W BUD3P25558 1636 aa-0.28□□□□□ -2.45
HSH49YOR319W FMP27Q06179 2628 aa-0.3□□□□□ -2.46
HSH49YOR319W FIG2P25653 1609 aa-0.32□□□□□ -2.46
HSH49YOR319W NUP192P47054 1683 aa-0.33□□□□□ -2.46
HSH49YOR319W MON2P48563 1636 aaPredicted RBP-0.33□□□□□ -2.46
HSH49YOR319W TOR2P32600 2474 aaKnown RBP-0.33□□□□□ -2.46
HSH49YOR319W YPR117WQ06116 2489 aa-0.35□□□□□ -2.47
HSH49YOR319W MEC1P38111 2368 aa-0.38□□□□□ -2.47
HSH49YOR319W ULS1Q08562 1619 aa-0.4□□□□□ -2.47
HSH49YOR319W STU1P38198 1513 aa-0.41□□□□□ -2.48
HSH49YOR319W THO2P53552 1597 aaKnown RBP-0.41□□□□□ -2.48
HSH49YOR319W YOR316C-AQ3E806 69 aa-0.42□□□□□ -2.48
HSH49YOR319W GCN2P15442 1659 aa-0.45□□□□□ -2.48
HSH49YOR319W ATG2P53855 1592 aa-0.48□□□□□ -2.49
HSH49YOR319W HIR3P47171 1648 aa-0.49□□□□□ -2.49
HSH49YOR319W NUP170P38181 1502 aa-0.5□□□□□ -2.49
HSH49YOR319W RKR1Q04781 1562 aa-0.5□□□□□ -2.49
HSH49YOR319W FLO1P32768 1537 aa-0.52□□□□□ -2.49
HSH49YOR319W YDR034C-AP0C289 58 aa-0.54□□□□□ -2.5
HSH49YOR319W PEP1P32319 1579 aa-0.55□□□□□ -2.5
HSH49YOR319W RPL29P05747 59 aaPredicted RBP-0.62□□□□□ -2.51
HSH49YOR319W COX9P07255 59 aa-0.62□□□□□ -2.51
HSH49YOR319W Q0017Q9ZZX8 53 aa-0.62□□□□□ -2.51
HSH49YOR319W TEL1P38110 2787 aa-0.65□□□□□ -2.51
HSH49YOR319W DDR2P89113 61 aa-0.66□□□□□ -2.52
HSH49YOR319W YJL133C-AQ3E7A3 74 aa-0.66□□□□□ -2.52
HSH49YOR319W DYN1P36022 4092 aa-0.66□□□□□ -2.52
HSH49YOR319W YML054C-AQ3E809 52 aa-0.7□□□□□ -2.52
HSH49YOR319W YLR342W-AQ3E810 57 aa-0.71□□□□□ -2.52
HSH49YOR319W YBR056W-AI2HB52 66 aa-0.79□□□□□ -2.54
HSH49YOR319W GCN1P33892 2672 aaKnown RBP-0.86□□□□□ -2.55
HSH49YOR319W YHR073W-AP0C5N7 58 aa-0.87□□□□□ -2.55
HSH49YOR319W MDN1Q12019 4910 aaKnown RBP-0.96□□□□□ -2.56
HSH49YOR319W CSF1Q12150 2958 aa-0.99□□□□□ -2.57
HSH49YOR319W YJL127C-BQ3E828 52 aa-0.99□□□□□ -2.57
HSH49YOR319W SMX2P40204 77 aaKnown RBP-1□□□□□ -2.57
HSH49YOR319W TRA1P38811 3744 aa-1.09□□□□□ -2.58
HSH49YOR319W CUP1-1P0CX80 61 aa-1.1□□□□□ -2.59
HSH49YOR319W CUP1-2P0CX81 61 aa-1.1□□□□□ -2.59
HSH49YOR319W CHC1P22137 1653 aaKnown RBP-1.21□□□□□ -2.6
HSH49YOR319W IRA1P18963 3092 aa-1.21□□□□□ -2.6
HSH49YOR319W YMR105W-AQ8TGS8 64 aa-1.24□□□□□ -2.61
HSH49YOR319W PMP3P87284 55 aa-1.26□□□□□ -2.61
HSH49YOR319W MLP2P40457 1679 aa-1.26□□□□□ -2.61
HSH49YOR319W NUM1Q00402 2748 aa-1.34□□□□□ -2.62
HSH49YOR319W IRA2P19158 3079 aa-1.41□□□□□ -2.64
HSH49YOR319W TOM7P53507 60 aa-1.43□□□□□ -2.64
HSH49YOR319W HOR7Q05827 59 aa-1.44□□□□□ -2.64
HSH49YOR319W VPS13Q07878 3144 aa-1.53□□□□□ -2.66
HSH49YOR319W YLL066W-BQ8TGJ7 56 aa-1.8□□□□□ -2.7
HSH49YOR319W NCE101Q02820 53 aa-2□□□□□ -2.73
HSH49YOR319W TOM1Q03280 3268 aa-2.39□□□□□ -2.79
HSH49YOR319W RPL39P04650 51 aa-2.57□□□□□ -2.82
HSH49YOR319W YIL046W-AQ3E7Z4 54 aa-3.05□□□□□ -2.9
HSH49YOR319W Q0297Q9ZZV8 51 aa-3.1□□□□□ -2.91
HSH49YOR319W YDR034W-BQ6Q5X2 51 aa-4.46□□□□□ -3.12
Retrieved 63 of 5,963 RNA–protein pairs in 15.1 ms